BLASTX nr result

ID: Coptis24_contig00019923 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019923
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247...    92   9e-17
emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]    92   9e-17
ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2...    89   7e-16
ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2...    82   7e-14
ref|XP_004142042.1| PREDICTED: uncharacterized protein LOC101206...    78   2e-12

>ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247348 [Vitis vinifera]
          Length = 3288

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 56/142 (39%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
 Frame = -1

Query: 652 LFVSGDRGITVHAFCHIDGTHKRHQNVKSLPEDEVGQGRWVEWG--T*TLHKTHANRRAN 479
           LFVSG+ G+TVHAFC  +   K  +  KS  E E  QG WVEWG  + ++H     +  +
Sbjct: 183 LFVSGNHGVTVHAFCQRE---KIREMTKSTLEGEFAQGMWVEWGPSSTSVHYREVKKDDS 239

Query: 478 LYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYTKVEIVELEGDF 299
              +  E  L       ++G  +  G+ ++ E S    T KKWL++F T  E V+ EG+ 
Sbjct: 240 WCCDAPEIVLDVNGSSGTKGSCNFCGKDRDDE-SARSLTSKKWLRSFLTTAETVKSEGNI 298

Query: 298 CTRFPVKSSYPSSVEIVSFSMF 233
            TRFP K SYP S ++VSFS+F
Sbjct: 299 WTRFPEKPSYPCSAKVVSFSIF 320


>emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]
          Length = 995

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 56/142 (39%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
 Frame = -1

Query: 652 LFVSGDRGITVHAFCHIDGTHKRHQNVKSLPEDEVGQGRWVEWG--T*TLHKTHANRRAN 479
           LFVSG+ G+TVHAFC  +   K  +  KS  E E  QG WVEWG  + ++H     +  +
Sbjct: 183 LFVSGNHGVTVHAFCQRE---KIREMTKSTLEGEFAQGMWVEWGPSSTSVHYREVKKDDS 239

Query: 478 LYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYTKVEIVELEGDF 299
              +  E  L       ++G  +  G+ ++ E S    T KKWL++F T  E V+ EG+ 
Sbjct: 240 WCCDAPEIVLDVNGSSGTKGSCNFCGKDRDDE-SARSLTSKKWLRSFLTTAETVKSEGNI 298

Query: 298 CTRFPVKSSYPSSVEIVSFSMF 233
            TRFP K SYP S ++VSFS+F
Sbjct: 299 WTRFPEKPSYPCSAKVVSFSIF 320


>ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
 Frame = -1

Query: 655 FLFVSGDRGITVHAFCH--IDGTHKRHQNVKSLPEDEVGQGRWVEWGT*TLHKTHANRRA 482
           FLFVS   G+TVHAF    IDG        K+  EDE GQGRWV+WG  +    +   R 
Sbjct: 155 FLFVSSSNGVTVHAFRKPDIDGG-----TTKTALEDEFGQGRWVDWGPSSTPAQNLKDRG 209

Query: 481 N--LYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYTKVEIVELE 308
           +  L        +       + G   D+ +    +  +     K+WL++F  KV+ ++ E
Sbjct: 210 SSGLCSEGTSTVVADDRANGNRGSLQDIDKESGADELLRGVASKRWLRSFSIKVKTIKSE 269

Query: 307 GDFCTRFPVKSSYPSSVEIVSFSMF 233
           G+  TRFP K+S+P S E+VSFS+F
Sbjct: 270 GNIWTRFPEKASFPGSAEVVSFSVF 294


>ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score = 82.4 bits (202), Expect = 7e-14
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
 Frame = -1

Query: 655 FLFVSGDRGITVHAFCH--IDGTHKRHQNVKSLPEDEVGQGRWVEWGT*TLHKTHANRR- 485
           FLFVS   G+TVHAF    IDG        KS  E E GQGRWV+WG  ++       + 
Sbjct: 150 FLFVSSSDGVTVHAFRKPDIDGG-----TTKSALEGEFGQGRWVDWGPSSMPAQFLKVQD 204

Query: 484 -ANLYGNDYENFLKGKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYTKVEIVELE 308
            ++         +  +    + G   D+ +    +        K+WL++F+ +VE ++ E
Sbjct: 205 SSSSCSESTSTVMADERANGNRGSLLDMDKESGPDELSKGVASKRWLRSFFIEVETIKSE 264

Query: 307 GDFCTRFPVKSSYPSSVEIVSFSMF 233
           G+  TRFP K+S+P S E+VSFS+F
Sbjct: 265 GNIWTRFPEKTSFPCSAEVVSFSVF 289


>ref|XP_004142042.1| PREDICTED: uncharacterized protein LOC101206379 [Cucumis sativus]
          Length = 3245

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
 Frame = -1

Query: 652 LFVSGDRGITVHAFCHIDGTHKRHQNVKSLPEDEVGQGRWVEWGT*T-----LHKTHANR 488
           LFVSG  G+T HAFC      K     K++ + E  +GRWVEWG        L    ++ 
Sbjct: 165 LFVSGSHGVTAHAFCE---PKKTVAEAKNMVQSEFRKGRWVEWGPYPTLPQILGAQESSG 221

Query: 487 RANLYGNDYENFLK--GKTIPKSEGRSHDVGRGQNGELSMMDYTLKKWLKTFYTKVEIVE 314
            +   GN  EN     G+ +P S  +       +N  L   + T K++L++F  KV+ +E
Sbjct: 222 SSETCGNVDENGRNQNGEMLPSSNSKC------ENDALLSGNSTSKRYLRSFLAKVKTIE 275

Query: 313 LEGDFCTRFPVKSSYPSSVEIVSFSMF 233
            E D  T +P KSS P   ++VSF++F
Sbjct: 276 YEDDIWTMYPEKSSVPCFTKVVSFNIF 302


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