BLASTX nr result

ID: Coptis24_contig00019922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019922
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
emb|CBI21533.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811...   105   5e-21
ref|XP_002530251.1| conserved hypothetical protein [Ricinus comm...   105   5e-21

>ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score =  122 bits (307), Expect = 2e-26
 Identities = 74/152 (48%), Positives = 90/152 (59%), Gaps = 17/152 (11%)
 Frame = +1

Query: 37  DGPAIIQLQKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEASLLPLTG--------- 183
           + PA++QL KW  ++  +DLS+F E FISPTRELLLLLS+QCEA LLPL           
Sbjct: 8   ESPAVLQLHKWGPSQFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAGESVSNRVS 67

Query: 184 ---TDELGGCYDSNSFSSSKQTTLRRLNSLDNTPSTSGSVEGVP---SLESTSPRSEDCS 345
               DE   C  S +FSS   T   R +  D+ P TS SV+      SLE    RS +  
Sbjct: 68  EPLNDERLQCRSSAAFSSESWTEPSRSDLKDDIPYTSASVKDFDNGFSLEHEFSRSNNSR 127

Query: 346 LISDVKSLAWGHYGDAYDQHKDVSFREFLFVS 441
            + DV SLAWG  GD Y+QHK+ SFREFLFVS
Sbjct: 128 FVCDVNSLAWGVCGDTYNQHKEASFREFLFVS 159


>ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score =  117 bits (294), Expect = 7e-25
 Identities = 71/147 (48%), Positives = 88/147 (59%), Gaps = 12/147 (8%)
 Frame = +1

Query: 37  DGPAIIQLQKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEASLLPLTGTDELGGCYD 210
           + PAI+QL KW  +K  +DLS+F E FISPTRELLLLLS+QCEA LLPL   + +  C  
Sbjct: 8   ESPAILQLHKWGPSKFNIDLSEFREGFISPTRELLLLLSYQCEALLLPLVAGESVNNCVS 67

Query: 211 S-------NSFSSSKQTTLRRLNSLDNTPSTSGSV---EGVPSLESTSPRSEDCSLISDV 360
                      SS   T   R +  D+ P +S SV   +   SLE+   RS +   + DV
Sbjct: 68  EPVGDERLQCRSSELCTESSRSDLKDDIPCSSASVGDFDNGFSLENGFLRSNNYGFVHDV 127

Query: 361 KSLAWGHYGDAYDQHKDVSFREFLFVS 441
            SLAWG  GD Y+QHK+ SFREFLFVS
Sbjct: 128 NSLAWGVCGDTYNQHKEASFREFLFVS 154


>emb|CBI21533.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  106 bits (264), Expect = 2e-21
 Identities = 68/148 (45%), Positives = 90/148 (60%), Gaps = 15/148 (10%)
 Frame = +1

Query: 49  IIQLQKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEASLLPLTGTDELGG------C 204
           ++QL +W  ++  L+LS+F EAFISPTRELLLLLS+QCEA LLPL   + +         
Sbjct: 1   MLQLHRWSPSQFQLNLSEFREAFISPTRELLLLLSYQCEALLLPLITGNSINSDHPETFN 60

Query: 205 YDS--NSFSSSKQTTL-RRLNSLDNTPSTSGSVEGVPS----LESTSPRSEDCSLISDVK 363
           Y+S  N +SS+   ++  R +S +N P TSGSV  V       E+   +      + DV 
Sbjct: 61  YESLQNPYSSAFSASVPSRSDSRENMPCTSGSVTVVSDNDFLCENNLSKCSGYPFVCDVN 120

Query: 364 SLAWGHYGDAYDQHKDVSFREFLFVSGD 447
           SLAWG  GD Y+QHKD  FRE LFVSG+
Sbjct: 121 SLAWGVCGDNYNQHKDTFFRELLFVSGN 148


>ref|XP_003524284.1| PREDICTED: uncharacterized protein LOC100811665 [Glycine max]
          Length = 3260

 Score =  105 bits (261), Expect = 5e-21
 Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 15/151 (9%)
 Frame = +1

Query: 37  DGPAIIQLQKWD--STKLDLSKFCEAFISPTRELLLLLSHQCEASLLPLT------GTDE 192
           + PAI+QL  WD   T++ LS F EAF+SPTRE+LLL S++ EA LLPL+      G  E
Sbjct: 51  EDPAILQLHNWDLSETRIGLSDFREAFLSPTREILLLHSYEREALLLPLSKGVLHSGGAE 110

Query: 193 LGGCYDSNSFSS---SKQTTLRRLNSL--DNTPSTSGSVEGVPS--LESTSPRSEDCSLI 351
            G  Y++++  S   S + + R   S+  +++P TSGS   + +        +S  C  I
Sbjct: 111 GGYDYENHNPGSADVSPEASTRPSESVLVNDSPCTSGSDTDIDTDLAGIKCSKSNSCPYI 170

Query: 352 SDVKSLAWGHYGDAYDQHKDVSFREFLFVSG 444
           SDV SLAW H  D YDQH D SFRE LFVSG
Sbjct: 171 SDVNSLAWAHCEDGYDQHNDASFREVLFVSG 201


>ref|XP_002530251.1| conserved hypothetical protein [Ricinus communis]
           gi|223530217|gb|EEF32121.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 809

 Score =  105 bits (261), Expect = 5e-21
 Identities = 69/158 (43%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
 Frame = +1

Query: 37  DGPAIIQLQKWDSTK--LDLSKFCEAFISPTRELLLLLSHQCEASLLPLTGTDELGGCYD 210
           + PAI+QL KW  ++  L+LS+F EAFISPTRELLLLLSHQCEA LLPL      G   D
Sbjct: 9   ESPAILQLYKWGPSQCQLNLSEFREAFISPTRELLLLLSHQCEALLLPLV----TGDATD 64

Query: 211 SNSFSS------SKQTTLRRLNSLDNTPSTSGSVEGVP-------------SLESTSPRS 333
            N   +        Q++    + L   PS S + E +              S E     S
Sbjct: 65  DNILETVHNDHLQSQSSAASSSQLSTHPSWSDTKENISPTDASATDCENGFSAEDQISTS 124

Query: 334 EDCSLISDVKSLAWGHYGDAYDQHKDVSFREFLFVSGD 447
                I DV SLAWG  GD Y+ H DV+FRE LFVS D
Sbjct: 125 NSYPFICDVNSLAWGVCGDMYNPHDDVTFRELLFVSND 162


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