BLASTX nr result

ID: Coptis24_contig00019921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019921
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays] gi|195621...   131   2e-28
gb|AFW61241.1| tyrosyl-tRNA synthetase [Zea mays]                     130   5e-28
ref|XP_003573505.1| PREDICTED: tyrosyl-tRNA synthetase-like [Bra...   130   5e-28
gb|AFW57366.1| hypothetical protein ZEAMMB73_289556 [Zea mays]        130   7e-28
dbj|BAK05692.1| predicted protein [Hordeum vulgare subsp. vulgar...   130   7e-28

>ref|NP_001148699.1| tyrosyl-tRNA synthetase [Zea mays] gi|195621482|gb|ACG32571.1|
           tyrosyl-tRNA synthetase [Zea mays]
          Length = 380

 Score =  131 bits (330), Expect = 2e-28
 Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 5/83 (6%)
 Frame = -1

Query: 236 QGILKTINVNKLVSAGCRVKIWVADWFVQLNNKMRGDLKKIWTIGEYLIEIWKAVGMNLD 57
           QG++KTINVNK+VSAGC+VKIW+ADWF QLNNKM GDLKKI T+G Y+IEIWKA GMNLD
Sbjct: 80  QGVVKTINVNKMVSAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 139

Query: 56  RVEFLWSYDE-----PRYWPLVM 3
            VEFLWS +E       YWP+VM
Sbjct: 140 GVEFLWSSEEINKRAHEYWPIVM 162


>gb|AFW61241.1| tyrosyl-tRNA synthetase [Zea mays]
          Length = 382

 Score =  130 bits (327), Expect = 5e-28
 Identities = 59/83 (71%), Positives = 69/83 (83%), Gaps = 5/83 (6%)
 Frame = -1

Query: 236 QGILKTINVNKLVSAGCRVKIWVADWFVQLNNKMRGDLKKIWTIGEYLIEIWKAVGMNLD 57
           QG++KTINVNK+V+AGC+VKIW+ADWF QLNNKM GDLKKI T+G Y+IEIWKA GMNLD
Sbjct: 82  QGVVKTINVNKMVNAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 141

Query: 56  RVEFLWSYDE-----PRYWPLVM 3
            VEFLWS +E       YWP+VM
Sbjct: 142 GVEFLWSSEEINKRAHEYWPIVM 164


>ref|XP_003573505.1| PREDICTED: tyrosyl-tRNA synthetase-like [Brachypodium distachyon]
          Length = 376

 Score =  130 bits (327), Expect = 5e-28
 Identities = 59/83 (71%), Positives = 68/83 (81%), Gaps = 5/83 (6%)
 Frame = -1

Query: 236 QGILKTINVNKLVSAGCRVKIWVADWFVQLNNKMRGDLKKIWTIGEYLIEIWKAVGMNLD 57
           QG++KTINVNK++ AGC+VKIW+ADWF QLNNKM GDLKKI T+G Y+IEIWKA GMNLD
Sbjct: 76  QGVVKTINVNKMIKAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 135

Query: 56  RVEFLWSYDE-----PRYWPLVM 3
            VEFLWS +E       YWPLVM
Sbjct: 136 GVEFLWSSEEINKRANEYWPLVM 158


>gb|AFW57366.1| hypothetical protein ZEAMMB73_289556 [Zea mays]
          Length = 378

 Score =  130 bits (326), Expect = 7e-28
 Identities = 60/83 (72%), Positives = 68/83 (81%), Gaps = 5/83 (6%)
 Frame = -1

Query: 236 QGILKTINVNKLVSAGCRVKIWVADWFVQLNNKMRGDLKKIWTIGEYLIEIWKAVGMNLD 57
           QGI+KTINVNK+V AGC+VKIW+ADWF QLNNKM GDLKKI T+G Y+IEIWKA GMNLD
Sbjct: 79  QGIVKTINVNKMVRAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 138

Query: 56  RVEFLWSYDE-----PRYWPLVM 3
            VEFLWS +E       YWP+VM
Sbjct: 139 GVEFLWSSEEINRRAHEYWPIVM 161


>dbj|BAK05692.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326527699|dbj|BAK08124.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326533322|dbj|BAJ93633.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 399

 Score =  130 bits (326), Expect = 7e-28
 Identities = 59/83 (71%), Positives = 68/83 (81%), Gaps = 5/83 (6%)
 Frame = -1

Query: 236 QGILKTINVNKLVSAGCRVKIWVADWFVQLNNKMRGDLKKIWTIGEYLIEIWKAVGMNLD 57
           QG++KTINVNK++ AGC+VKIW+ADWF QLNNKM GDLKKI T+G Y+IEIWKA GMNLD
Sbjct: 99  QGVVKTINVNKMIRAGCKVKIWIADWFAQLNNKMGGDLKKIQTVGRYMIEIWKAAGMNLD 158

Query: 56  RVEFLWSYDE-----PRYWPLVM 3
            VEFLWS +E       YWPLVM
Sbjct: 159 GVEFLWSSEEINRCANEYWPLVM 181


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