BLASTX nr result

ID: Coptis24_contig00019907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019907
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i...    77   1e-12
ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i...    77   1e-12
ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352...    77   1e-12
ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-l...    76   3e-12
ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis
           vinifera]
          Length = 549

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = +1

Query: 223 FKALVFADANAIKQNSMKLGAGEDLYALFAGILTMRPWNRV 345
           +K L+F+DANAIK+NS+KLGAGEDLYALFAGILTMRPWNRV
Sbjct: 384 WKGLIFSDANAIKENSVKLGAGEDLYALFAGILTMRPWNRV 424


>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis
           vinifera] gi|297736618|emb|CBI25489.3| unnamed protein
           product [Vitis vinifera]
          Length = 538

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = +1

Query: 223 FKALVFADANAIKQNSMKLGAGEDLYALFAGILTMRPWNRV 345
           +K L+F+DANAIK+NS+KLGAGEDLYALFAGILTMRPWNRV
Sbjct: 373 WKGLIFSDANAIKENSVKLGAGEDLYALFAGILTMRPWNRV 413


>ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1|
           ATATH9, putative [Ricinus communis]
          Length = 549

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 36/41 (87%), Positives = 41/41 (100%)
 Frame = +1

Query: 223 FKALVFADANAIKQNSMKLGAGEDLYALFAGILTMRPWNRV 345
           +KALVFADA++IK+NS+KLGAGEDLYALFAGILTMRPWNRV
Sbjct: 382 WKALVFADAHSIKENSVKLGAGEDLYALFAGILTMRPWNRV 422


>ref|XP_003552397.1| PREDICTED: putative ABC1 protein At2g40090-like [Glycine max]
          Length = 541

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/41 (87%), Positives = 39/41 (95%)
 Frame = +1

Query: 223 FKALVFADANAIKQNSMKLGAGEDLYALFAGILTMRPWNRV 345
           +KALVFADANAIK+ S KLGAGEDLYALFAG+LTMRPWNRV
Sbjct: 371 WKALVFADANAIKEYSTKLGAGEDLYALFAGVLTMRPWNRV 411


>ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/41 (80%), Positives = 40/41 (97%)
 Frame = +1

Query: 223 FKALVFADANAIKQNSMKLGAGEDLYALFAGILTMRPWNRV 345
           +KAL+F+DANAIK+NS+KLGAGEDLYALFA ILTM+PWNR+
Sbjct: 347 WKALIFSDANAIKENSVKLGAGEDLYALFAAILTMKPWNRI 387


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