BLASTX nr result
ID: Coptis24_contig00019906
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019906 (475 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332927.1| predicted protein [Populus trichocarpa] gi|2... 60 1e-07 gb|ABD65009.1| hypothetical protein 26.t00030 [Brassica oleracea] 60 2e-07 gb|ABD64980.1| hypothetical protein 25.t00029 [Brassica oleracea] 59 4e-07 dbj|BAF00929.1| hypothetical protein [Arabidopsis thaliana] 57 1e-06 ref|NP_193463.1| uncharacterized protein [Arabidopsis thaliana] ... 57 1e-06 >ref|XP_002332927.1| predicted protein [Populus trichocarpa] gi|222833694|gb|EEE72171.1| predicted protein [Populus trichocarpa] Length = 110 Score = 60.5 bits (145), Expect = 1e-07 Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 7/104 (6%) Frame = -3 Query: 410 ACNRFINRTSLNSLKSAIKST----SPFSATRVPLXXXXXXXXXXXXXXXXXXR---AEL 252 +C +FI+++SL+S+KS+I+S+ SP + TR EL Sbjct: 7 SCRKFISKSSLSSIKSSIRSSKAPKSPSTPTRSATASHFLLPSKPPTSSRFSFSRAPCEL 66 Query: 251 GCLESLLPLHSAVAVXXXXXXXXXXXXXXXXXLQGSLCCTSPGL 120 GC++SLLPLHSAVA QG+LCCTSPGL Sbjct: 67 GCVQSLLPLHSAVAASRMTSCLSTTSRNFRALSQGTLCCTSPGL 110 >gb|ABD65009.1| hypothetical protein 26.t00030 [Brassica oleracea] Length = 108 Score = 60.1 bits (144), Expect = 2e-07 Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 8/105 (7%) Frame = -3 Query: 410 ACNRFINRTSLNSLKSAIKST---SPFSATRVPL-----XXXXXXXXXXXXXXXXXXRAE 255 ACNRF+NR+S++SL+SAI+S+ SP P +E Sbjct: 4 ACNRFMNRSSVSSLRSAIRSSLHKSPIGTGSSPSASSAGFRIPSKPAASPRFSFSRCPSE 63 Query: 254 LGCLESLLPLHSAVAVXXXXXXXXXXXXXXXXXLQGSLCCTSPGL 120 LGC +SLLPLHS VA QG+LCCTSP L Sbjct: 64 LGCAQSLLPLHSTVAAARLTSCLSVTSRNSRALSQGTLCCTSPDL 108 >gb|ABD64980.1| hypothetical protein 25.t00029 [Brassica oleracea] Length = 109 Score = 58.9 bits (141), Expect = 4e-07 Identities = 40/109 (36%), Positives = 53/109 (48%), Gaps = 13/109 (11%) Frame = -3 Query: 407 CNRFINRTSLNSLKSAIKST---------SPFSAT----RVPLXXXXXXXXXXXXXXXXX 267 CNRF+NR+S++SL+SAI+S +P SA+ R+P Sbjct: 6 CNRFMNRSSVSSLRSAIRSALHKSPVGTGTPPSASSAGFRIP-----SKPAASPRFSFSR 60 Query: 266 XRAELGCLESLLPLHSAVAVXXXXXXXXXXXXXXXXXLQGSLCCTSPGL 120 +ELGC++SLLPLHS VA QG+LCCTSP L Sbjct: 61 CPSELGCVQSLLPLHSTVAAARLTSCLSVTSRSSRALSQGTLCCTSPDL 109 >dbj|BAF00929.1| hypothetical protein [Arabidopsis thaliana] Length = 99 Score = 57.4 bits (137), Expect = 1e-06 Identities = 34/97 (35%), Positives = 45/97 (46%) Frame = -3 Query: 410 ACNRFINRTSLNSLKSAIKSTSPFSATRVPLXXXXXXXXXXXXXXXXXXRAELGCLESLL 231 AC + NR S++SLKS ++ST+ S + +ELGC++SLL Sbjct: 4 ACRKLFNRASVSSLKSTLRSTTG-STSAASSAGFRLPSQPTRHFSFSRCPSELGCVQSLL 62 Query: 230 PLHSAVAVXXXXXXXXXXXXXXXXXLQGSLCCTSPGL 120 PLHS VA QG+LCCTSP L Sbjct: 63 PLHSTVAAARLSSCLSTTSRSSRALSQGTLCCTSPDL 99 >ref|NP_193463.1| uncharacterized protein [Arabidopsis thaliana] gi|15292857|gb|AAK92799.1| unknown protein [Arabidopsis thaliana] gi|37202058|gb|AAQ89644.1| At4g17310 [Arabidopsis thaliana] gi|51969176|dbj|BAD43280.1| hypothetical protein [Arabidopsis thaliana] gi|332658475|gb|AEE83875.1| uncharacterized protein [Arabidopsis thaliana] Length = 99 Score = 57.4 bits (137), Expect = 1e-06 Identities = 34/97 (35%), Positives = 45/97 (46%) Frame = -3 Query: 410 ACNRFINRTSLNSLKSAIKSTSPFSATRVPLXXXXXXXXXXXXXXXXXXRAELGCLESLL 231 AC + NR S++SLKS ++ST+ S + +ELGC++SLL Sbjct: 4 ACRKLFNRASVSSLKSTLRSTTG-STSAASSAGFRLPSQPTRHFSFSRCPSELGCVQSLL 62 Query: 230 PLHSAVAVXXXXXXXXXXXXXXXXXLQGSLCCTSPGL 120 PLHS VA QG+LCCTSP L Sbjct: 63 PLHSTVAAARLTSCLSTTSRSSRALSQGTLCCTSPDL 99