BLASTX nr result
ID: Coptis24_contig00019901
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019901 (257 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup1... 85 7e-15 ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup1... 85 7e-15 ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup1... 84 2e-14 emb|CBI26832.3| unnamed protein product [Vitis vinifera] 84 2e-14 ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicag... 78 7e-13 >ref|XP_003530891.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] Length = 1486 Score = 84.7 bits (208), Expect = 7e-15 Identities = 39/53 (73%), Positives = 46/53 (86%) Frame = +2 Query: 2 KNLVNQRDSQLGGRQSAGSRTATRASKPSIVCITPLSTVESKWLHFVAVLSDG 160 +NLVNQRD+ G RQS GSR ++R+ KPSIVCI+PLST+ESKWLH VAVLSDG Sbjct: 296 RNLVNQRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDG 348 >ref|XP_003525230.1| PREDICTED: nuclear pore complex protein Nup155-like [Glycine max] Length = 1485 Score = 84.7 bits (208), Expect = 7e-15 Identities = 39/53 (73%), Positives = 46/53 (86%) Frame = +2 Query: 2 KNLVNQRDSQLGGRQSAGSRTATRASKPSIVCITPLSTVESKWLHFVAVLSDG 160 +NLVNQRD+ G RQS GSR ++R+ KPSIVCI+PLST+ESKWLH VAVLSDG Sbjct: 296 RNLVNQRDAHYGARQSTGSRVSSRSPKPSIVCISPLSTLESKWLHLVAVLSDG 348 >ref|XP_002281257.2| PREDICTED: nuclear pore complex protein Nup155-like [Vitis vinifera] Length = 1496 Score = 83.6 bits (205), Expect = 2e-14 Identities = 37/53 (69%), Positives = 47/53 (88%) Frame = +2 Query: 2 KNLVNQRDSQLGGRQSAGSRTATRASKPSIVCITPLSTVESKWLHFVAVLSDG 160 ++L+NQ+D+ GGRQSAGSR + R+ KPSI+CI+PLST+ESKWLH VAVLSDG Sbjct: 296 RSLINQKDAHYGGRQSAGSRPSNRSVKPSIICISPLSTLESKWLHLVAVLSDG 348 >emb|CBI26832.3| unnamed protein product [Vitis vinifera] Length = 377 Score = 83.6 bits (205), Expect = 2e-14 Identities = 37/53 (69%), Positives = 47/53 (88%) Frame = +2 Query: 2 KNLVNQRDSQLGGRQSAGSRTATRASKPSIVCITPLSTVESKWLHFVAVLSDG 160 ++L+NQ+D+ GGRQSAGSR + R+ KPSI+CI+PLST+ESKWLH VAVLSDG Sbjct: 296 RSLINQKDAHYGGRQSAGSRPSNRSVKPSIICISPLSTLESKWLHLVAVLSDG 348 >ref|XP_003630944.1| Nuclear pore complex protein Nup155 [Medicago truncatula] gi|355524966|gb|AET05420.1| Nuclear pore complex protein Nup155 [Medicago truncatula] Length = 1484 Score = 78.2 bits (191), Expect = 7e-13 Identities = 37/53 (69%), Positives = 46/53 (86%) Frame = +2 Query: 2 KNLVNQRDSQLGGRQSAGSRTATRASKPSIVCITPLSTVESKWLHFVAVLSDG 160 +NLVN +D+ GGRQS+GSR ++R+ KPSIVCI+PLST+ESK LH VAVLSDG Sbjct: 296 RNLVNHKDAHHGGRQSSGSRVSSRSPKPSIVCISPLSTLESKSLHLVAVLSDG 348