BLASTX nr result

ID: Coptis24_contig00019890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019890
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545736.1| PREDICTED: uncharacterized protein LOC100806...   165   4e-39
ref|XP_002263526.2| PREDICTED: uncharacterized protein LOC100243...   159   2e-37
ref|XP_003635445.1| PREDICTED: uncharacterized protein LOC100853...   159   2e-37
gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]   157   7e-37
ref|XP_003631712.1| PREDICTED: uncharacterized protein LOC100853...   157   1e-36

>ref|XP_003545736.1| PREDICTED: uncharacterized protein LOC100806549 [Glycine max]
          Length = 418

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/146 (56%), Positives = 106/146 (72%)
 Frame = -1

Query: 438 VPLDDQPRYRNRKGDIRHNVLVVCSFDMKITYVLAWWEGSVHDSRMLRSSLTRVRDKLIV 259
           V  +D+PRYRNRKGDI  NVL VC  D++  YVL  WEGS  DSR+LR +L R ++ L +
Sbjct: 194 VSAEDRPRYRNRKGDISTNVLGVCGPDLRFIYVLPGWEGSAGDSRVLRDALHR-QNCLHI 252

Query: 258 PNGKYYLGDAGFPHAPGFMTPYRGIRYHLVERLGREPETSKELYNYRHSSLRNVIERVFG 79
           PNGKY+L DAG+ + PGF+ PYRG RYHL E +   P+  KEL+N RH+S RNVIER FG
Sbjct: 253 PNGKYFLVDAGYTNGPGFLAPYRGTRYHLNEWIRNTPQNYKELFNLRHASARNVIERSFG 312

Query: 78  LLKKRFAYLRTTPFYSVDT*IKLILA 1
           +LKKR++ LRT  F+ + T I++I A
Sbjct: 313 VLKKRWSILRTPSFFDIKTQIRIINA 338


>ref|XP_002263526.2| PREDICTED: uncharacterized protein LOC100243362 [Vitis vinifera]
          Length = 447

 Score =  159 bits (403), Expect = 2e-37
 Identities = 83/141 (58%), Positives = 96/141 (68%), Gaps = 2/141 (1%)
 Frame = -1

Query: 417 RYRNRKGDIRHNVLVVCSFDMKITYVLAWWEGSVHDSRMLRSSLTRVRDKLIVPNGKYYL 238
           RYR RK     NVL  CSFD+K TYVL  WEGS  DSR+L ++L R  DKLIVP GKYYL
Sbjct: 79  RYRGRKYYPTQNVLAACSFDLKFTYVLPGWEGSASDSRILDNALVRDFDKLIVPQGKYYL 138

Query: 237 GDAGFPHAPGFMTPYRGIRYHLVERLGREPETSKELYNYRHSSLRNVIERVFGLLKKRFA 58
            DAGF    GF+TPYR  RYHL E    +PE ++E++N RHSSLRN IER FG+LKKRF 
Sbjct: 139 ADAGFQLKTGFLTPYRSTRYHLKEYSVHQPENAREVFNLRHSSLRNAIERAFGVLKKRFP 198

Query: 57  YLR--TTPFYSVDT*IKLILA 1
            +   T P Y VDT   +ILA
Sbjct: 199 IIASGTEPHYPVDTQSDIILA 219


>ref|XP_003635445.1| PREDICTED: uncharacterized protein LOC100853349 [Vitis vinifera]
          Length = 568

 Score =  159 bits (402), Expect = 2e-37
 Identities = 83/141 (58%), Positives = 96/141 (68%), Gaps = 2/141 (1%)
 Frame = -1

Query: 417 RYRNRKGDIRHNVLVVCSFDMKITYVLAWWEGSVHDSRMLRSSLTRVRDKLIVPNGKYYL 238
           RYR RK     NVL  CSFD+K TYVL  WEGS  DSR+L ++L R  DKLIVP GKYYL
Sbjct: 174 RYRGRKYYPTQNVLAACSFDLKFTYVLPGWEGSASDSRILDNALMRDFDKLIVPQGKYYL 233

Query: 237 GDAGFPHAPGFMTPYRGIRYHLVERLGREPETSKELYNYRHSSLRNVIERVFGLLKKRFA 58
            DAGF    GF+TPYR  RYHL E    +PE ++E++N RHSSLRN IER FG+LKKRF 
Sbjct: 234 ADAGFQLKTGFLTPYRSTRYHLKEYSVHQPENAREVFNLRHSSLRNAIERAFGVLKKRFP 293

Query: 57  YLR--TTPFYSVDT*IKLILA 1
            +   T P Y VDT   +ILA
Sbjct: 294 IIASGTEPHYPVDTQSDIILA 314


>gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]
          Length = 558

 Score =  157 bits (398), Expect = 7e-37
 Identities = 79/140 (56%), Positives = 99/140 (70%), Gaps = 2/140 (1%)
 Frame = -1

Query: 438 VPLDDQPRYRNRKGDIRHNVLVVCSFDMKITYVLAWWEGSVHDSRMLRSSLTRVRDKLIV 259
           VPL DQ RYRNRK  I  NVL VC   MK  YVLA WEGS  DSR+LR +++R  D  +V
Sbjct: 161 VPLTDQGRYRNRKQRITTNVLGVCDRQMKFLYVLAGWEGSASDSRILRDAMSR-EDSFVV 219

Query: 258 PNGKYYLGDAGFPHAPGFMTPYRGIRYHLVERL--GREPETSKELYNYRHSSLRNVIERV 85
           P+GKYYL DAG+ + PGF+ PYR  RYHL E    G  P T++EL+N RH++ RNVIER 
Sbjct: 220 PSGKYYLVDAGYTNGPGFLAPYRSTRYHLNEWAIQGNNPSTARELFNLRHATARNVIERT 279

Query: 84  FGLLKKRFAYLRTTPFYSVD 25
           FGLLK R+A LRT+ ++ ++
Sbjct: 280 FGLLKMRWAILRTSSYFDLE 299


>ref|XP_003631712.1| PREDICTED: uncharacterized protein LOC100853260 [Vitis vinifera]
          Length = 506

 Score =  157 bits (396), Expect = 1e-36
 Identities = 82/141 (58%), Positives = 95/141 (67%), Gaps = 2/141 (1%)
 Frame = -1

Query: 417 RYRNRKGDIRHNVLVVCSFDMKITYVLAWWEGSVHDSRMLRSSLTRVRDKLIVPNGKYYL 238
           RYR R      NVL  CSFD+K TYVL  WEGS  DSR+L ++L R  DKLIVP GKYYL
Sbjct: 135 RYRGRNYYPTQNVLAACSFDLKFTYVLPGWEGSASDSRILDNALVRDFDKLIVPQGKYYL 194

Query: 237 GDAGFPHAPGFMTPYRGIRYHLVERLGREPETSKELYNYRHSSLRNVIERVFGLLKKRFA 58
            DAGF    GF+TPYR  RYHL E    +PE ++E++N RHSSLRN IER FG+LKKRF 
Sbjct: 195 ADAGFQLKIGFLTPYRSTRYHLKEYSVHQPENAREVFNLRHSSLRNAIERAFGVLKKRFP 254

Query: 57  YLR--TTPFYSVDT*IKLILA 1
            +   T P Y VDT   +ILA
Sbjct: 255 IIASGTEPHYPVDTQSDIILA 275


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