BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019885
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]        142   2e-32
ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group] g...   141   5e-32
gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indi...   141   5e-32
ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [S...   139   2e-31
ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31

>gb|AFW71774.1| hypothetical protein ZEAMMB73_242527 [Zea mays]
          Length = 625

 Score =  142 bits (359), Expect = 2e-32
 Identities = 67/112 (59%), Positives = 85/112 (75%)
 Frame = +3

Query: 3   DMYAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPT 182
           DMY KCGC+D A  +FD ++ +DVVLWNAMI GLA++GHG+ ALEL+  M   G +PN +
Sbjct: 296 DMYCKCGCMDEAWWVFDGVQSQDVVLWNAMIGGLAMNGHGKRALELFRRMLDMGFVPNES 355

Query: 183 TFVTVLSACAHSGMVAEGIEIFKTMKANGIEPGIEHYGCLADIFGRAGRVQE 338
           TFV VL AC H+G V EG EIF++M  +GIEP  EHYGCLAD+ GRAG ++E
Sbjct: 356 TFVVVLCACTHTGRVDEGKEIFRSMCDHGIEPRREHYGCLADLLGRAGLLEE 407



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
 Frame = +3

Query: 9   YAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTF 188
           Y KCG ++ A E+F R+ ++ +V W+AMI      G   +AL ++  M   G  P+    
Sbjct: 194 YGKCGDLEAAREVFVRMPERGLVSWSAMIDACIRAGEFSEALRMFDQMMGNGFRPDAVVL 253

Query: 189 VTVLSACAHSGMVAEGIEIFKTMKANGIEPGIEHY---GCLADIFGRAGRVQE 338
            +VL ACAH G +  G  + + +KA G+    ++      L D++ + G + E
Sbjct: 254 SSVLKACAHLGALERGRWVHRFLKAEGLGRSPDNVMLETALVDMYCKCGCMDE 306


>ref|NP_001047105.1| Os02g0552100 [Oryza sativa Japonica Group]
           gi|46389885|dbj|BAD15486.1| putative pentatricopeptide
           (PPR) repeat-containing protein [Oryza sativa Japonica
           Group] gi|113536636|dbj|BAF09019.1| Os02g0552100 [Oryza
           sativa Japonica Group] gi|125582482|gb|EAZ23413.1|
           hypothetical protein OsJ_07107 [Oryza sativa Japonica
           Group] gi|215712305|dbj|BAG94432.1| unnamed protein
           product [Oryza sativa Japonica Group]
          Length = 586

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/112 (57%), Positives = 85/112 (75%)
 Frame = +3

Query: 3   DMYAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPT 182
           DMY KCGC++ A ++FD +  +DVVLWNAMI GLA++G+G  ALEL+  M ++G MPN +
Sbjct: 257 DMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNES 316

Query: 183 TFVTVLSACAHSGMVAEGIEIFKTMKANGIEPGIEHYGCLADIFGRAGRVQE 338
           TF+ VL AC H+G V EG  +FK+M+  GI+P  EHYGCLAD+ GRAG V+E
Sbjct: 317 TFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEE 368


>gb|EAY86252.1| hypothetical protein OsI_07623 [Oryza sativa Indica Group]
          Length = 629

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/112 (57%), Positives = 85/112 (75%)
 Frame = +3

Query: 3   DMYAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPT 182
           DMY KCGC++ A ++FD +  +DVVLWNAMI GLA++G+G  ALEL+  M ++G MPN +
Sbjct: 257 DMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERALELFRRMLQKGFMPNES 316

Query: 183 TFVTVLSACAHSGMVAEGIEIFKTMKANGIEPGIEHYGCLADIFGRAGRVQE 338
           TF+ VL AC H+G V EG  +FK+M+  GI+P  EHYGCLAD+ GRAG V+E
Sbjct: 317 TFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLLGRAGNVEE 368


>ref|XP_002452256.1| hypothetical protein SORBIDRAFT_04g022510 [Sorghum bicolor]
           gi|241932087|gb|EES05232.1| hypothetical protein
           SORBIDRAFT_04g022510 [Sorghum bicolor]
          Length = 590

 Score =  139 bits (351), Expect = 2e-31
 Identities = 63/112 (56%), Positives = 85/112 (75%)
 Frame = +3

Query: 3   DMYAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPT 182
           DMY KCGC++ A  +FD ++  DVVLWNAMI GLA++GHG+ ALEL+  M  +G +PN +
Sbjct: 261 DMYCKCGCMNEAWWVFDGVQSHDVVLWNAMIGGLAMNGHGKRALELFRRMLDKGFVPNES 320

Query: 183 TFVTVLSACAHSGMVAEGIEIFKTMKANGIEPGIEHYGCLADIFGRAGRVQE 338
           TFV  L AC H+G V EG ++F++M+ +GIEP  EHYGCLAD+ GRAG ++E
Sbjct: 321 TFVVALCACIHTGRVDEGEDVFRSMRDHGIEPRREHYGCLADLLGRAGLLEE 372



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
 Frame = +3

Query: 9   YAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTF 188
           Y KCG ++ A E+F R+ ++ +V W+AMI      G   +AL ++  M   G  P+    
Sbjct: 159 YGKCGDLEAAREVFVRMPERGLVSWSAMIDACVRTGEFSEALRVFDQMTGNGFKPDAVVL 218

Query: 189 VTVLSACAHSGMVAEGIEIFKTMKAN--GIEPG-IEHYGCLADIFGRAGRVQE 338
           V+VL  CAH G +  G  + + +KA   G  PG +     L D++ + G + E
Sbjct: 219 VSVLKTCAHLGALERGRWVHRFLKAERLGGRPGNVMLETALVDMYCKCGCMNE 271


>ref|XP_003572610.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Brachypodium distachyon]
          Length = 454

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/112 (58%), Positives = 83/112 (74%)
 Frame = +3

Query: 3   DMYAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPT 182
           DMY KCGC++ A  +FD ++ +DVVLWN+MI GLA++GHG  ALEL+  M + G +PN +
Sbjct: 254 DMYCKCGCMEEAWCVFDGVRYRDVVLWNSMIGGLAMNGHGDRALELFQRMLQEGFVPNQS 313

Query: 183 TFVTVLSACAHSGMVAEGIEIFKTMKANGIEPGIEHYGCLADIFGRAGRVQE 338
           TF   L AC H+G V EG EIFK+M  +GIEP  EHYGCLAD+ GRAGRV E
Sbjct: 314 TFAGALCACTHTGHVDEGREIFKSMWHHGIEPQREHYGCLADLLGRAGRVGE 365



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
 Frame = +3

Query: 9   YAKCGCIDVALELFDRIKDKDVVLWNAMISGLALHGHGRDALELYFTMRRRGTMPNPTTF 188
           Y K G +  A E+F R+  +++V W+AMI  L       +AL ++  M R G  P+    
Sbjct: 152 YGKSGDLAAAREVFGRMPGRNLVSWSAMIDALVHAEEFGEALSVFDQMMREGFKPDVVVL 211

Query: 189 VTVLSACAHSGMVAEGIEIFKTMKANGI---EPGIEHYGCLADIFGRAGRVQE 338
           V++L ACAH G V  G    + ++  G    +  +     L D++ + G ++E
Sbjct: 212 VSMLKACAHLGAVKRGRWAHQYLETEGFAGRQRNVMVETALVDMYCKCGCMEE 264