BLASTX nr result

ID: Coptis24_contig00019864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019864
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874266.1| hypothetical protein ARALYDRAFT_489409 [Arab...   206   8e-51
ref|NP_197933.1| protein phosphatase 2A regulatory B subunit [Ar...   204   2e-50
ref|XP_003567932.1| PREDICTED: serine/threonine protein phosphat...   200   5e-49
emb|CAC85920.1| protein phosphatase 2A B'kappa subunit [Oryza sa...   195   1e-47
ref|XP_002284853.2| PREDICTED: serine/threonine protein phosphat...   195   1e-47

>ref|XP_002874266.1| hypothetical protein ARALYDRAFT_489409 [Arabidopsis lyrata subsp.
           lyrata] gi|297320103|gb|EFH50525.1| hypothetical protein
           ARALYDRAFT_489409 [Arabidopsis lyrata subsp. lyrata]
          Length = 499

 Score =  206 bits (523), Expect = 8e-51
 Identities = 109/167 (65%), Positives = 129/167 (77%)
 Frame = -2

Query: 501 MLKQLLNRLPRKSSKSDIGDSAGSHSGNNGITVSGTRIQRSNSANVVPNRTNALKRMSSA 322
           M KQ L++LPRKSSKSD G+   S SG     VS    +   SA   P R+N+ KRMSSA
Sbjct: 1   MFKQFLSKLPRKSSKSDSGELNRSSSG----PVSSPVQRSGTSAGSGPVRSNSGKRMSSA 56

Query: 321 VFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQTLIE 142
           VFP++VV GIEPL+ FKDV + EK NLFVSK++LCCV FDFS+P KNS+EKDVKRQTL+E
Sbjct: 57  VFPASVVAGIEPLVPFKDVPSSEKLNLFVSKVSLCCVTFDFSEPGKNSIEKDVKRQTLLE 116

Query: 141 LVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGGEADD 1
           L+DFVASGS +FTEP I  +C+M AVNLFRVFPPNYRSS +GGE DD
Sbjct: 117 LLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSS-SGGENDD 162


>ref|NP_197933.1| protein phosphatase 2A regulatory B subunit [Arabidopsis thaliana]
           gi|75163671|sp|Q93YV6.1|2A5I_ARATH RecName:
           Full=Serine/threonine protein phosphatase 2A 57 kDa
           regulatory subunit B' iota isoform; Short=AtB' iota;
           Short=PP2A, B' subunit, iota isoform
           gi|16604607|gb|AAL24096.1| putative AtBgamma protein
           [Arabidopsis thaliana] gi|23296589|gb|AAN13126.1|
           putative AtBgamma protein [Arabidopsis thaliana]
           gi|332006073|gb|AED93456.1| protein phosphatase 2A
           regulatory B subunit [Arabidopsis thaliana]
          Length = 500

 Score =  204 bits (520), Expect = 2e-50
 Identities = 109/169 (64%), Positives = 131/169 (77%), Gaps = 2/169 (1%)
 Frame = -2

Query: 501 MLKQLLNRLPRKSSKSDIGDSAGSHSG--NNGITVSGTRIQRSNSANVVPNRTNALKRMS 328
           M KQ L++LPRKSSKSD G+   S SG  ++ +  SGT     +     P R+N+ KRMS
Sbjct: 1   MFKQFLSKLPRKSSKSDSGELNRSSSGPVSSPVQRSGT-----SGGGSGPVRSNSGKRMS 55

Query: 327 SAVFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQTL 148
           SAVFP++VV GIEPL+ FKDV + EK NLFVSK++LCCV FDFSDP KNS+EKDVKRQTL
Sbjct: 56  SAVFPASVVAGIEPLVPFKDVPSSEKLNLFVSKVSLCCVTFDFSDPGKNSIEKDVKRQTL 115

Query: 147 IELVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGGEADD 1
           +EL+DFVASGS +FTEP I  +C+M AVNLFRVFPPNYRSS +GGE DD
Sbjct: 116 LELLDFVASGSVKFTEPAILAMCRMCAVNLFRVFPPNYRSS-SGGENDD 163


>ref|XP_003567932.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa
           regulatory subunit B' iota isoform-like [Brachypodium
           distachyon]
          Length = 506

 Score =  200 bits (508), Expect = 5e-49
 Identities = 108/171 (63%), Positives = 128/171 (74%), Gaps = 4/171 (2%)
 Frame = -2

Query: 501 MLKQLLNRLPRKSSKS--DIGDSAGSHSGNNGITVSGTRIQRSNSANVVP--NRTNALKR 334
           M KQ L++LPRKSS S  D  DS    +GN      G+ IQR++S   +P    T+ +KR
Sbjct: 1   MWKQFLSKLPRKSSGSGRDDFDSGQCSNGN------GSSIQRTSSCGSIPAGRSTSTIKR 54

Query: 333 MSSAVFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQ 154
           MSSAVFPS+VV GIEPL+SFKDV   EKQNLFVSKLNLCC VFDFSDP+K+S EKD+KRQ
Sbjct: 55  MSSAVFPSSVVAGIEPLVSFKDVPNSEKQNLFVSKLNLCCAVFDFSDPSKSSAEKDIKRQ 114

Query: 153 TLIELVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGGEADD 1
           TL++LVDFV S S+RF+E VIA   +M AVNLFRVFPPNYRS   GGE D+
Sbjct: 115 TLLDLVDFVDSSSSRFSEAVIAACSRMFAVNLFRVFPPNYRSGSGGGEGDE 165


>emb|CAC85920.1| protein phosphatase 2A B'kappa subunit [Oryza sativa Japonica
           Group] gi|49328037|gb|AAT58738.1| protein phosphatase 2A
           B'kappa subunit [Oryza sativa Japonica Group]
          Length = 510

 Score =  195 bits (496), Expect = 1e-47
 Identities = 102/165 (61%), Positives = 126/165 (76%), Gaps = 2/165 (1%)
 Frame = -2

Query: 501 MLKQLLNRLPRKSSKSDIGDSAGSHSGNNGITVSGTRIQRSNSANVVPN--RTNALKRMS 328
           M K  L++LPRK+S S  G    S   +NG   +G  IQR++S   +P+   T+ +KRMS
Sbjct: 1   MWKGFLSKLPRKTSASGRGADLDSGQCSNGAG-NGNPIQRTSSCGSIPSGRSTSTIKRMS 59

Query: 327 SAVFPSTVVTGIEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQTL 148
           SA+FPS+VV GIEPL+SFKDV   EKQNLFVSKLNLCC VFDFSDPNK+S EKD+KRQTL
Sbjct: 60  SAIFPSSVVAGIEPLVSFKDVPNSEKQNLFVSKLNLCCAVFDFSDPNKSSAEKDIKRQTL 119

Query: 147 IELVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGG 13
           ++L+D+V S S+RF+E VIA   +M AVNLFRVFPPNYRSS +GG
Sbjct: 120 LDLIDYVDSSSSRFSEAVIAASSRMFAVNLFRVFPPNYRSSSSGG 164


>ref|XP_002284853.2| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa
           regulatory subunit B' iota isoform [Vitis vinifera]
          Length = 540

 Score =  195 bits (496), Expect = 1e-47
 Identities = 108/170 (63%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
 Frame = -2

Query: 501 MLKQLLNRLPRKSSKSDIGDSAGSHSGNNGITVSGTRIQRSNSANVVPNRTNALKRMSSA 322
           M+KQ+L++LPRKSSKSD   SAGS S NN  T  G+ IQ SN  NVV       +RMSSA
Sbjct: 42  MIKQILSKLPRKSSKSDTLASAGSDSNNN--TNLGSSIQCSNGLNVV-------RRMSSA 92

Query: 321 VFPSTVVTG---IEPLLSFKDVSTQEKQNLFVSKLNLCCVVFDFSDPNKNSLEKDVKRQT 151
           VFPS V  G   +EP LSFKDV   EKQ LFVSKLNLCCVV+ F+DP+K+  EKD KRQ 
Sbjct: 93  VFPSMVAAGAEAVEPHLSFKDVPNTEKQKLFVSKLNLCCVVYHFNDPDKDQAEKDSKRQA 152

Query: 150 LIELVDFVASGSARFTEPVIAGICKMSAVNLFRVFPPNYRSSLNGGEADD 1
           LIELVDFVASGSA+F+E  IA  CKM A+NLFR FPP YRS+  GGE +D
Sbjct: 153 LIELVDFVASGSAKFSEAAIAATCKMCAINLFRDFPPKYRSNSTGGETED 202


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