BLASTX nr result

ID: Coptis24_contig00019862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019862
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302218.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
emb|CBI18962.3| unnamed protein product [Vitis vinifera]              107   8e-22
ref|XP_002520305.1| ATP binding protein, putative [Ricinus commu...   107   1e-21
ref|XP_002306655.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
gb|AAC34357.1| Putative protein kinase [Arabidopsis thaliana]          98   8e-19

>ref|XP_002302218.1| predicted protein [Populus trichocarpa] gi|222843944|gb|EEE81491.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  110 bits (274), Expect = 2e-22
 Identities = 64/102 (62%), Positives = 73/102 (71%)
 Frame = -3

Query: 406 KLKICRGACIRKVLVHEVKSYLANKIIVGAPSKNRHSIRPSSTSVAKYLAKKLPRECSVI 227
           KLKICRG+  RK+LV EVKSY A K+IVGA +KN  SI  SSTSVAKY AKKLP++CSV+
Sbjct: 83  KLKICRGSSTRKILVREVKSYAATKVIVGA-AKNHPSIW-SSTSVAKYCAKKLPKDCSVL 140

Query: 226 AVNNGKVVFQSERTTLAKNGMDDGKPTSLLLAFHRTLSRNSK 101
           AVNNGKVVFQ ER+       D  K  SLL   HRT+S   K
Sbjct: 141 AVNNGKVVFQRERSPNTSGTKDHSK--SLLSVVHRTISSEKK 180


>emb|CBI18962.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score =  107 bits (268), Expect = 8e-22
 Identities = 59/108 (54%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
 Frame = -3

Query: 406 KLKICRGACIRKVLVHEVKSYLANKIIVGAPSKNRHSIRPSSTSVAKYLAKKLPRECSVI 227
           KLKICRG+ I K+LV EVKSY+A+K+IVG  ++N H+IR SS +VAKY AKKLP++CSV+
Sbjct: 90  KLKICRGSSIGKILVREVKSYVASKVIVGT-ARNHHAIR-SSAAVAKYCAKKLPKDCSVL 147

Query: 226 AVNNGKVVFQSE---RTTLAKNGMDDGKPTSLLLAFHRTLSRNSKVLS 92
           AVNNGKVVFQ E   RTT+     ++ +   LL    +++S+ SK L+
Sbjct: 148 AVNNGKVVFQREASMRTTVDSQEKEEHRRNGLLGGIQQSVSKKSKALN 195


>ref|XP_002520305.1| ATP binding protein, putative [Ricinus communis]
           gi|223540524|gb|EEF42091.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 758

 Score =  107 bits (266), Expect = 1e-21
 Identities = 66/137 (48%), Positives = 92/137 (67%), Gaps = 10/137 (7%)
 Frame = -3

Query: 406 KLKICRGACIRKVLVHEVKSYLANKIIVGAPSKNRHSIRPSSTSVAKYLAKKLPRECSVI 227
           KLKICRG+ IRK+LV E KSY A  IIVGA ++  H+IR S TSVAKY AKKL ++C V+
Sbjct: 92  KLKICRGSSIRKILVREAKSYSATNIIVGA-ARTHHTIR-SPTSVAKYCAKKLSKDCLVL 149

Query: 226 AVNNGKVVFQSERTTLA---KNGMDDGKPTSLLLAFHR--TLSRNSKVLSAAEMLD---- 74
           AV+NGKVVFQ E +T      +G +D +    +  FHR  +LS+NSKV+S + + +    
Sbjct: 150 AVHNGKVVFQKEGSTAKTGDSHGSEDDQRKGFVNIFHRSISLSKNSKVISESGINEAPKY 209

Query: 73  -VNKKSHKTFGEELLKS 26
            V + + +TF + L+K+
Sbjct: 210 VVGEGNEQTFHQALVKA 226


>ref|XP_002306655.1| predicted protein [Populus trichocarpa] gi|222856104|gb|EEE93651.1|
           predicted protein [Populus trichocarpa]
          Length = 697

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 52/74 (70%), Positives = 61/74 (82%)
 Frame = -3

Query: 406 KLKICRGACIRKVLVHEVKSYLANKIIVGAPSKNRHSIRPSSTSVAKYLAKKLPRECSVI 227
           KLKICRG+ IR++LV E KSY A K+IVGA ++N  SI PS TSVAKY AKKLP++CSV+
Sbjct: 83  KLKICRGSSIRRILVREAKSYTATKVIVGA-TRNHLSIWPS-TSVAKYCAKKLPKDCSVL 140

Query: 226 AVNNGKVVFQSERT 185
           A NNGKVVFQ ERT
Sbjct: 141 AFNNGKVVFQRERT 154


>gb|AAC34357.1| Putative protein kinase [Arabidopsis thaliana]
          Length = 781

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 60/124 (48%), Positives = 82/124 (66%), Gaps = 6/124 (4%)
 Frame = -3

Query: 406 KLKICRGACIRKVLVHEVKSYLANKIIVGAPSKNRHSIRPSSTSVAKYLAKKLPRECSVI 227
           KLK+CRG+  RK+LV E KS+ A K++VG  SK+ H+IR SS SVAKY+AKKL ++C VI
Sbjct: 123 KLKLCRGSSARKILVREAKSFSATKVLVGI-SKSHHAIR-SSASVAKYIAKKLSKDCWVI 180

Query: 226 AVNNGKVVFQSE----RTTLAKNGMDDGKPTSLLLAFHR--TLSRNSKVLSAAEMLDVNK 65
           AVNNGK++FQ E     T     G +D +  +LL    R  TL++ +KV+S +E  D N 
Sbjct: 181 AVNNGKILFQKEGSPSSTINQSQGKEDVRRITLLNVLQRSVTLNKTTKVVSHSEE-DSNS 239

Query: 64  KSHK 53
           K  +
Sbjct: 240 KEEE 243


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