BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019861
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328150.1| predicted protein [Populus trichocarpa] gi|2...   293   5e-77
ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containi...   292   1e-76
ref|XP_002514391.1| pentatricopeptide repeat-containing protein,...   291   2e-76
emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]   290   4e-76
ref|XP_003516576.1| PREDICTED: pentatricopeptide repeat-containi...   288   2e-75

>ref|XP_002328150.1| predicted protein [Populus trichocarpa] gi|222837665|gb|EEE76030.1|
            predicted protein [Populus trichocarpa]
          Length = 347

 Score =  293 bits (751), Expect = 5e-77
 Identities = 168/345 (48%), Positives = 204/345 (59%), Gaps = 11/345 (3%)
 Frame = -1

Query: 1213 NSSSRRLYSNLPRDFTTILRNYISRAGTETNQSSLPNVEGDRRIQRTRRDGAGSPPNPIP 1034
            +S SR   S + R F++ ++   + AG   +       E +RR+Q        +PP PIP
Sbjct: 15   HSHSRISLSQILRRFSSSIKGSTAGAGFNFDD------EKERRLQNQ------NPPEPIP 62

Query: 1033 NRPLRGXXXXXXXXXXXXXXXXXXXRT--------EAQRNHPKLDLGSDD---DTPLVHT 887
            NRPLRG                             + Q      +  SDD   D   +H 
Sbjct: 63   NRPLRGPKPNFNNNTNRPARPQPSHHPSTTSPFNLQPQTQTHDFNRISDDAFLDKFKLHP 122

Query: 886  NPAGESXXXXXXXXXXXXXXGPTTNNSGCEPEEASSPPQDSDEIFKKMKETGLIPNAVAM 707
            +                    P   N        S P QD+++IF KMKETGLIPNAVAM
Sbjct: 123  DHNNNVNKDAAAADTKAAAAPPPPKNEQASSASTSEPSQDAEQIFNKMKETGLIPNAVAM 182

Query: 706  LDGLCKDGLVQDAMKLFGLMRDKGTIPEVVIYTAVVDGFSKAHKFDDAKRIFRKMQTNGI 527
            LDGLCKDGLVQ+A+KLFG MR+KGTIPEVVIYTAVVDGF KAHK DDAKRIFRKMQ+NGI
Sbjct: 183  LDGLCKDGLVQEALKLFGTMREKGTIPEVVIYTAVVDGFCKAHKLDDAKRIFRKMQSNGI 242

Query: 526  PPNAFSYTVLIQGLCRGRNLEDAADFCVEMLEAGHLPNVSTFTTLIDGFCKDKGVQEAES 347
             PNAFSY VLIQGL +    +DA DFC EMLE GH PNV+TF  LIDG C++KGV+EA +
Sbjct: 243  TPNAFSYAVLIQGLSKCNLFDDAIDFCFEMLELGHSPNVTTFVGLIDGLCREKGVEEART 302

Query: 346  TVRRLREKGFFVNDKSVREHLDKNGPFSPLLWEAIFGKKISQKLF 212
             +  LR+KGF V+DK+VR+ LDKN P S  +W+AIFGKK S K F
Sbjct: 303  VIGTLRQKGFHVHDKAVRDFLDKNKPLSSSVWDAIFGKKPSHKPF 347


>ref|XP_003537572.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Glycine max]
          Length = 388

 Score =  292 bits (748), Expect = 1e-76
 Identities = 139/190 (73%), Positives = 165/190 (86%)
 Frame = -1

Query: 781 SPPQDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTIPEVVIYTAV 602
           S PQD+DEIFKKMKETGLIPNAVAMLDGLCKDGLVQ+A+KLFGLMR+KGTIPE+VIYTAV
Sbjct: 199 SMPQDADEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLMREKGTIPEIVIYTAV 258

Query: 601 VDGFSKAHKFDDAKRIFRKMQTNGIPPNAFSYTVLIQGLCRGRNLEDAADFCVEMLEAGH 422
           V+G++KAHK DDAKRIFRKMQ++G+ PNAFSY VLIQGL +   L DA +FCVEMLEAGH
Sbjct: 259 VEGYTKAHKADDAKRIFRKMQSSGVSPNAFSYMVLIQGLYKCSRLHDAFEFCVEMLEAGH 318

Query: 421 LPNVSTFTTLIDGFCKDKGVQEAESTVRRLREKGFFVNDKSVREHLDKNGPFSPLLWEAI 242
            PNV+TF  L+DGFC +KGV+EA+S ++ L +KGF VN+K+VR+ LDK  PFSP +WEAI
Sbjct: 319 SPNVTTFVGLVDGFCNEKGVEEAKSAIKTLTDKGFVVNEKAVRQFLDKKAPFSPSVWEAI 378

Query: 241 FGKKISQKLF 212
           FGKK  Q+ F
Sbjct: 379 FGKKAPQRPF 388


>ref|XP_002514391.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223546488|gb|EEF47987.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 313

 Score =  291 bits (745), Expect = 2e-76
 Identities = 158/305 (51%), Positives = 190/305 (62%), Gaps = 3/305 (0%)
 Frame = -1

Query: 1117 SSLPNVEGDRRIQRTRRDGAG---SPPNPIPNRPLRGXXXXXXXXXXXXXXXXXXXRTEA 947
            SS+    G   +   R D +    SPP+PIPNRPLRG                       
Sbjct: 23   SSIRETRGSFSLNGERDDASNVDNSPPHPIPNRPLRGQTSFNQSQSQSPRIP-------- 74

Query: 946  QRNHPKLDLGSDDDTPLVHTNPAGESXXXXXXXXXXXXXXGPTTNNSGCEPEEASSPPQD 767
            +RN  +  L SDD       N                     T+ +          PP D
Sbjct: 75   RRNTNQNHLSSDDFLEKFKLNKRNHKDEIPHQINNH------TSKDENINKSSPPPPPPD 128

Query: 766  SDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTIPEVVIYTAVVDGFS 587
            +++IF KMKETGLIPNAVAMLDGLCKDGLVQ+AMKLFGLMR KGTIPEVV+YTAVVDGF 
Sbjct: 129  ANDIFNKMKETGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRQKGTIPEVVVYTAVVDGFC 188

Query: 586  KAHKFDDAKRIFRKMQTNGIPPNAFSYTVLIQGLCRGRNLEDAADFCVEMLEAGHLPNVS 407
            KAHK DDAKRIF+KM  NGI PNAFSYTV IQGLC+   ++DA DFC +ML+AGH PNV+
Sbjct: 189  KAHKTDDAKRIFKKMIDNGITPNAFSYTVTIQGLCKCNAVDDAVDFCFQMLDAGHSPNVT 248

Query: 406  TFTTLIDGFCKDKGVQEAESTVRRLREKGFFVNDKSVREHLDKNGPFSPLLWEAIFGKKI 227
            TF  L+DG C++KGV EA++ +  LR+KGF++N K++RE LDKN P S  L +AIFGKK 
Sbjct: 249  TFVGLVDGLCREKGVDEAQNVIEDLRKKGFYINGKAIREFLDKNAPLSSDLSQAIFGKKP 308

Query: 226  SQKLF 212
            SQ  F
Sbjct: 309  SQMPF 313


>emb|CAN78573.1| hypothetical protein VITISV_020581 [Vitis vinifera]
          Length = 381

 Score =  290 bits (743), Expect = 4e-76
 Identities = 156/293 (53%), Positives = 189/293 (64%), Gaps = 10/293 (3%)
 Frame = -1

Query: 1060 AGSPPNPIPNRPLRGXXXXXXXXXXXXXXXXXXXRTEA----------QRNHPKLDLGSD 911
            + +PPNPIPNRPLRG                   + E            +  P   +G+ 
Sbjct: 94   SSNPPNPIPNRPLRGEQRMNRPPPHIPQRKLGLPKDEGVDRASQASPFNQPSPAEKVGAT 153

Query: 910  DDTPLVHTNPAGESXXXXXXXXXXXXXXGPTTNNSGCEPEEASSPPQDSDEIFKKMKETG 731
             +   +     G                     N G E      PPQ++DEIF+KMKE+G
Sbjct: 154  LEDGFLERFKLGVQKKERPQESAAAQPSREQDANHGKE-----QPPQNADEIFRKMKESG 208

Query: 730  LIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTIPEVVIYTAVVDGFSKAHKFDDAKRIF 551
            LIPNAVAMLDGLCKDGLVQ+AMKLFGLMR+KGTIPEVVIYTAVV+GF KA + DDA RIF
Sbjct: 209  LIPNAVAMLDGLCKDGLVQEAMKLFGLMREKGTIPEVVIYTAVVEGFCKARQLDDAVRIF 268

Query: 550  RKMQTNGIPPNAFSYTVLIQGLCRGRNLEDAADFCVEMLEAGHLPNVSTFTTLIDGFCKD 371
            RKMQ NGI PNAFSYTVLI+G+ +G  L+ A DFCVEMLEAGH PNV+T   LI  FCK+
Sbjct: 269  RKMQNNGISPNAFSYTVLIRGMYKGNRLDIAVDFCVEMLEAGHSPNVATLVDLIHEFCKE 328

Query: 370  KGVQEAESTVRRLREKGFFVNDKSVREHLDKNGPFSPLLWEAIFGKKISQKLF 212
            KGV+EA++ +  L++KG FV+DK+VRE+LDK GP SPL+WEA FGKK  Q+ F
Sbjct: 329  KGVEEAKNVIVTLKQKGLFVDDKAVREYLDKKGPQSPLVWEAFFGKKSPQRSF 381


>ref|XP_003516576.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Glycine max]
          Length = 397

 Score =  288 bits (738), Expect = 2e-75
 Identities = 138/190 (72%), Positives = 164/190 (86%)
 Frame = -1

Query: 781 SPPQDSDEIFKKMKETGLIPNAVAMLDGLCKDGLVQDAMKLFGLMRDKGTIPEVVIYTAV 602
           S PQD++EIFKKMKETGLIPNAVAMLDGLCKDGLVQ+A+KLFGL+R+KGTIPE+VIYTAV
Sbjct: 208 SMPQDANEIFKKMKETGLIPNAVAMLDGLCKDGLVQEALKLFGLIREKGTIPEIVIYTAV 267

Query: 601 VDGFSKAHKFDDAKRIFRKMQTNGIPPNAFSYTVLIQGLCRGRNLEDAADFCVEMLEAGH 422
           V+G++KAHK DDAKRIFRKMQ++GI PNAFSYTVLIQGL +   L DA +FCVEMLEAGH
Sbjct: 268 VEGYTKAHKADDAKRIFRKMQSSGISPNAFSYTVLIQGLYKCNRLHDAFEFCVEMLEAGH 327

Query: 421 LPNVSTFTTLIDGFCKDKGVQEAESTVRRLREKGFFVNDKSVREHLDKNGPFSPLLWEAI 242
            PNV+ F  L+DGFC +KGV+EA+S ++ L EKGF VN+K+V + LDK  PFSP +WEAI
Sbjct: 328 SPNVTAFVGLVDGFCNEKGVEEAKSAIKTLTEKGFVVNEKAVGQFLDKKAPFSPSVWEAI 387

Query: 241 FGKKISQKLF 212
           FGKK  Q+ F
Sbjct: 388 FGKKAPQRPF 397