BLASTX nr result

ID: Coptis24_contig00019856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019856
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518311.1| serine/threonine-protein kinase bri1, putati...    79   4e-13
ref|XP_002322384.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
gb|ABA94303.1| Leucine Rich Repeat family protein [Oryza sativa ...    71   8e-11
gb|EEC68364.1| hypothetical protein OsI_36499 [Oryza sativa Indi...    71   8e-11
ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10

>ref|XP_002518311.1| serine/threonine-protein kinase bri1, putative [Ricinus communis]
           gi|223542531|gb|EEF44071.1| serine/threonine-protein
           kinase bri1, putative [Ricinus communis]
          Length = 962

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/74 (51%), Positives = 54/74 (72%)
 Frame = -1

Query: 223 RIKNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDLHN 44
           ++KNL   +L WNS  G IPASFG L +L++L L +N+L+G +P  LG+LS LT LD+  
Sbjct: 416 QLKNLVELNLQWNSLQGPIPASFGNLQNLSELRLEANKLNGTLPDSLGQLSELTALDVSI 475

Query: 43  NQLTGVVFEVHLAK 2
           N+LTGV+ EVH ++
Sbjct: 476 NELTGVISEVHFSR 489



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/65 (43%), Positives = 42/65 (64%)
 Frame = -1

Query: 220 IKNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDLHNN 41
           + +L++  LS N   GS+P S G  S L+ LDL+SN LSG++P  LG+L+ L  L L NN
Sbjct: 656 MNSLQVLDLSRNKLTGSVPLSIGNCSLLSALDLQSNNLSGEVPRSLGQLTMLQTLHLSNN 715

Query: 40  QLTGV 26
           + + +
Sbjct: 716 RFSDI 720



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
 Frame = -1

Query: 247 DRMFLTCKRI-----KNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFL 83
           D +   C ++     + +E+   + N   G +PAS G ++ LT  DL  N + G+IP  +
Sbjct: 298 DNLTANCSQLLRGNWERIEVLDFALNKLHGELPASLGNMTFLTYFDLFVNAVEGEIPSSI 357

Query: 82  GRLSNLTNLDLHNNQLTG 29
           G+L NL  LDL  N LTG
Sbjct: 358 GKLCNLQYLDLSGNNLTG 375


>ref|XP_002322384.1| predicted protein [Populus trichocarpa] gi|222869380|gb|EEF06511.1|
           predicted protein [Populus trichocarpa]
          Length = 982

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
 Frame = -1

Query: 220 IKNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDLHNN 41
           +++L   HLS N+F+G IPAS G + SLT L L SN L+G IP  LG L NLT L+L +N
Sbjct: 198 LEHLSALHLSGNNFEGPIPASIGNMRSLTSLLLSSNNLTGAIPASLGNLGNLTTLNLSSN 257

Query: 40  QLTGVV----------FEVHLAK 2
            LTG +           E+HLAK
Sbjct: 258 NLTGTIPASLGNLRSLSELHLAK 280



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/67 (50%), Positives = 42/67 (62%)
 Frame = -1

Query: 223 RIKNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDLHN 44
           RI NL    LS NS  G+IP   G+L SL  LDL  N LSG +P  +G LSNL+ L LH 
Sbjct: 125 RIGNLIKLDLSSNSISGNIPPEVGKLVSLDLLDLSKNNLSGGLPTSIGNLSNLSYLYLHG 184

Query: 43  NQLTGVV 23
           N+L+G +
Sbjct: 185 NELSGFI 191


>gb|ABA94303.1| Leucine Rich Repeat family protein [Oryza sativa Japonica Group]
           gi|125577525|gb|EAZ18747.1| hypothetical protein
           OsJ_34268 [Oryza sativa Japonica Group]
          Length = 921

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = -1

Query: 229 CKRIKNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDL 50
           C   + L+  HL+ N   G IP   GRL+SL  LDL +N ++G++P  +G L+NL NL L
Sbjct: 350 CSPNQQLKEVHLAGNHITGMIPNGIGRLTSLVTLDLFNNNITGKVPSEIGMLTNLKNLYL 409

Query: 49  HNNQLTGVVFEVHLAK 2
           HNN L GV+ E H A+
Sbjct: 410 HNNHLDGVITEKHFAR 425



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 38/64 (59%)
 Frame = -1

Query: 214 NLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDLHNNQL 35
           NL    LSWN F GS+P   G  S+L  L L+ N  SG IP+ + +L  L++LDL  N L
Sbjct: 616 NLSFLDLSWNKFSGSLPTWIGNFSNLEFLRLKHNMFSGNIPVSITKLGRLSHLDLACNCL 675

Query: 34  TGVV 23
           +G +
Sbjct: 676 SGTI 679


>gb|EEC68364.1| hypothetical protein OsI_36499 [Oryza sativa Indica Group]
          Length = 720

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/76 (46%), Positives = 48/76 (63%)
 Frame = -1

Query: 229 CKRIKNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDL 50
           C   + L+  HL+ N   G IP   GRL+SL  LDL +N ++G++P  +G L+NL NL L
Sbjct: 368 CSPNQQLKEVHLAGNHITGMIPNGIGRLTSLVTLDLFNNNITGKVPSEIGMLTNLKNLYL 427

Query: 49  HNNQLTGVVFEVHLAK 2
           HNN L GV+ E H A+
Sbjct: 428 HNNHLDGVITEKHFAR 443


>ref|XP_002315858.1| predicted protein [Populus trichocarpa] gi|222864898|gb|EEF02029.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = -1

Query: 217 KNLEIPHLSWNSFDGSIPASFGRLSSLTQLDLRSNRLSGQIPLFLGRLSNLTNLDLHNNQ 38
           K+L   +L  N+F G IPAS GRLSSL  LDL  N L+G +P  +G+L NL  L++HNN 
Sbjct: 355 KHLVNLNLYSNAFSGPIPASIGRLSSLKLLDLSHNYLNGSVPESVGQLFNLEFLNIHNNS 414

Query: 37  LTGVVFEVHLAK 2
           L+G+V E H +K
Sbjct: 415 LSGIVSERHFSK 426


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