BLASTX nr result
ID: Coptis24_contig00019853
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019853 (546 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002533273.1| conserved hypothetical protein [Ricinus comm... 129 4e-28 ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein ... 127 9e-28 ref|XP_002866989.1| hypothetical protein ARALYDRAFT_490949 [Arab... 123 2e-26 ref|NP_568009.5| PQ-loop repeat family protein / transmembrane f... 122 3e-26 emb|CAB16817.1| putative protein [Arabidopsis thaliana] gi|72706... 122 3e-26 >ref|XP_002533273.1| conserved hypothetical protein [Ricinus communis] gi|223526898|gb|EEF29105.1| conserved hypothetical protein [Ricinus communis] Length = 377 Score = 129 bits (323), Expect = 4e-28 Identities = 58/80 (72%), Positives = 68/80 (85%) Frame = -1 Query: 453 GLNPLMFIFAFVANATYVASILVRSTEWKKIKPNMPWLLDAIVCVVLDLFIILQYIYYRF 274 GLNPLMFIFA VAN TYV SI+VR+TEW+ IK NMPWLLDA VCV LD FIILQY+YYR+ Sbjct: 298 GLNPLMFIFALVANLTYVLSIVVRTTEWESIKANMPWLLDAAVCVALDFFIILQYVYYRY 357 Query: 273 LRKEKPRNGQDYGDYMETEK 214 R++K R+G+DYGDYM+ K Sbjct: 358 FREKKMRHGEDYGDYMDAVK 377 >ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein YOL092W-like [Vitis vinifera] gi|297735218|emb|CBI17580.3| unnamed protein product [Vitis vinifera] Length = 381 Score = 127 bits (320), Expect = 9e-28 Identities = 59/82 (71%), Positives = 69/82 (84%) Frame = -1 Query: 453 GLNPLMFIFAFVANATYVASILVRSTEWKKIKPNMPWLLDAIVCVVLDLFIILQYIYYRF 274 GLNPLMF+FA +AN TYVASILVR+TEW+KIK NMPWLLDA VCV+LDLFIILQYIYY++ Sbjct: 298 GLNPLMFVFALIANVTYVASILVRTTEWEKIKANMPWLLDAAVCVMLDLFIILQYIYYKY 357 Query: 273 LRKEKPRNGQDYGDYMETEKPV 208 LRK+ G+D GDY+ K V Sbjct: 358 LRKKISSAGEDLGDYIAANKAV 379 >ref|XP_002866989.1| hypothetical protein ARALYDRAFT_490949 [Arabidopsis lyrata subsp. lyrata] gi|297312825|gb|EFH43248.1| hypothetical protein ARALYDRAFT_490949 [Arabidopsis lyrata subsp. lyrata] Length = 375 Score = 123 bits (308), Expect = 2e-26 Identities = 59/82 (71%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -1 Query: 453 GLNPLMFIFAFVANATYVASILVRSTEWKKIKPNMPWLLDAIVCVVLDLFIILQYIYYRF 274 GLNPLMFIFA VANATYV SILVR+TEW IKPN+PWLLDAIVCVVLDLFIILQYIYY++ Sbjct: 290 GLNPLMFIFALVANATYVGSILVRTTEWDNIKPNLPWLLDAIVCVVLDLFIILQYIYYKY 349 Query: 273 LRKEKPRNGQD--YGDYMETEK 214 R + ++ YGDY+E K Sbjct: 350 CRMQSLERKEEDVYGDYVEASK 371 >ref|NP_568009.5| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gi|15028159|gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gi|332661309|gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] Length = 392 Score = 122 bits (307), Expect = 3e-26 Identities = 60/82 (73%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -1 Query: 453 GLNPLMFIFAFVANATYVASILVRSTEWKKIKPNMPWLLDAIVCVVLDLFIILQYIYYRF 274 GLNPLMFIFA VANATYV SILVR+TEW IKPN+PWLLDAIVCVVLDLFIILQYIYY++ Sbjct: 307 GLNPLMFIFALVANATYVGSILVRTTEWDNIKPNLPWLLDAIVCVVLDLFIILQYIYYKY 366 Query: 273 LRKE--KPRNGQDYGDYMETEK 214 R + + R YGDY+E K Sbjct: 367 CRIKSLESREEDAYGDYVEASK 388 >emb|CAB16817.1| putative protein [Arabidopsis thaliana] gi|7270634|emb|CAB80351.1| putative protein [Arabidopsis thaliana] Length = 374 Score = 122 bits (307), Expect = 3e-26 Identities = 60/82 (73%), Positives = 67/82 (81%), Gaps = 2/82 (2%) Frame = -1 Query: 453 GLNPLMFIFAFVANATYVASILVRSTEWKKIKPNMPWLLDAIVCVVLDLFIILQYIYYRF 274 GLNPLMFIFA VANATYV SILVR+TEW IKPN+PWLLDAIVCVVLDLFIILQYIYY++ Sbjct: 289 GLNPLMFIFALVANATYVGSILVRTTEWDNIKPNLPWLLDAIVCVVLDLFIILQYIYYKY 348 Query: 273 LRKE--KPRNGQDYGDYMETEK 214 R + + R YGDY+E K Sbjct: 349 CRIKSLESREEDAYGDYVEASK 370