BLASTX nr result

ID: Coptis24_contig00019850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019850
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43567.1| unknown [Lotus japonicus]                              140   1e-31
ref|XP_003566723.1| PREDICTED: uncharacterized protein LOC100829...   140   1e-31
ref|XP_002282371.1| PREDICTED: uncharacterized protein LOC100243...   139   2e-31
emb|CBI29922.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002882327.1| hypothetical protein ARALYDRAFT_477663 [Arab...   139   2e-31

>gb|AFK43567.1| unknown [Lotus japonicus]
          Length = 133

 Score =  140 bits (353), Expect = 1e-31
 Identities = 65/85 (76%), Positives = 72/85 (84%)
 Frame = +2

Query: 20  MEDSKSSCSRCHLCAGPLSKEMETTSWTIAPFVRDSFSMIGSAVGGIASAFYGFNHAMPV 199
           M  SK+   RCH CAGPLSKEMET+ WTIAP VRDSFSMIGSAVGG  SAFYGFNH MPV
Sbjct: 6   MSSSKNDL-RCHHCAGPLSKEMETSDWTIAPLVRDSFSMIGSAVGGTTSAFYGFNHVMPV 64

Query: 200 VQRFIKGPMWVHFLVGAPPVIVVSS 274
           V+R++KGPMW+HFL+G PPVIV SS
Sbjct: 65  VRRYVKGPMWLHFLIGTPPVIVFSS 89


>ref|XP_003566723.1| PREDICTED: uncharacterized protein LOC100829694 [Brachypodium
           distachyon]
          Length = 135

 Score =  140 bits (352), Expect = 1e-31
 Identities = 62/76 (81%), Positives = 69/76 (90%)
 Frame = +2

Query: 47  RCHLCAGPLSKEMETTSWTIAPFVRDSFSMIGSAVGGIASAFYGFNHAMPVVQRFIKGPM 226
           RCH CAGPLSK+MET+SWT+ P VRDSFSMIGSAVGG A AFY FNHAMPVV+R+IKGPM
Sbjct: 12  RCHHCAGPLSKDMETSSWTVTPLVRDSFSMIGSAVGGTAGAFYAFNHAMPVVRRYIKGPM 71

Query: 227 WVHFLVGAPPVIVVSS 274
           W+HFL+GAPPVIV SS
Sbjct: 72  WIHFLIGAPPVIVFSS 87


>ref|XP_002282371.1| PREDICTED: uncharacterized protein LOC100243478 [Vitis vinifera]
          Length = 148

 Score =  139 bits (351), Expect = 2e-31
 Identities = 61/77 (79%), Positives = 72/77 (93%)
 Frame = +2

Query: 44  SRCHLCAGPLSKEMETTSWTIAPFVRDSFSMIGSAVGGIASAFYGFNHAMPVVQRFIKGP 223
           SRCH CAGPLSK+MET++WT+ PF+RDSFSMIG+AVGGIASAFYGFN+ MP+VQ+ +KGP
Sbjct: 25  SRCHHCAGPLSKDMETSAWTVPPFIRDSFSMIGTAVGGIASAFYGFNYVMPIVQKRVKGP 84

Query: 224 MWVHFLVGAPPVIVVSS 274
           MW+HFLVGAPPVIV SS
Sbjct: 85  MWLHFLVGAPPVIVFSS 101


>emb|CBI29922.3| unnamed protein product [Vitis vinifera]
          Length = 134

 Score =  139 bits (351), Expect = 2e-31
 Identities = 61/77 (79%), Positives = 72/77 (93%)
 Frame = +2

Query: 44  SRCHLCAGPLSKEMETTSWTIAPFVRDSFSMIGSAVGGIASAFYGFNHAMPVVQRFIKGP 223
           SRCH CAGPLSK+MET++WT+ PF+RDSFSMIG+AVGGIASAFYGFN+ MP+VQ+ +KGP
Sbjct: 11  SRCHHCAGPLSKDMETSAWTVPPFIRDSFSMIGTAVGGIASAFYGFNYVMPIVQKRVKGP 70

Query: 224 MWVHFLVGAPPVIVVSS 274
           MW+HFLVGAPPVIV SS
Sbjct: 71  MWLHFLVGAPPVIVFSS 87


>ref|XP_002882327.1| hypothetical protein ARALYDRAFT_477663 [Arabidopsis lyrata subsp.
           lyrata] gi|297328167|gb|EFH58586.1| hypothetical protein
           ARALYDRAFT_477663 [Arabidopsis lyrata subsp. lyrata]
          Length = 134

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/86 (75%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
 Frame = +2

Query: 20  MEDS-KSSCSRCHLCAGPLSKEMETTSWTIAPFVRDSFSMIGSAVGGIASAFYGFNHAMP 196
           M DS K   SRCH CAGPL+K +ET  WT+APF+RDSFSMIGSAVGG ASAF GFNH MP
Sbjct: 1   MADSWKEIGSRCHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFNHVMP 60

Query: 197 VVQRFIKGPMWVHFLVGAPPVIVVSS 274
           +V+++IKGPMW+HFLVGAPPVIVVSS
Sbjct: 61  IVRKWIKGPMWLHFLVGAPPVIVVSS 86


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