BLASTX nr result

ID: Coptis24_contig00019838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019838
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    62   4e-08
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    62   4e-08
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    62   4e-08
emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]    59   4e-07
ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232...    56   3e-06

>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 23/39 (58%), Positives = 34/39 (87%)
 Frame = +2

Query: 134 IKRLTPVQMRARREKGLCYNCDDQYKPGHHCKSQQLYML 250
           ++RL+P QM+ RR+KGLCYNCDD++ PGH CKS +L+++
Sbjct: 241 VQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIM 279


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 23/39 (58%), Positives = 34/39 (87%)
 Frame = +2

Query: 134 IKRLTPVQMRARREKGLCYNCDDQYKPGHHCKSQQLYML 250
           ++RL+P QM+ RR+KGLCYNCDD++ PGH CKS +L+++
Sbjct: 239 VQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIM 277


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 23/39 (58%), Positives = 34/39 (87%)
 Frame = +2

Query: 134 IKRLTPVQMRARREKGLCYNCDDQYKPGHHCKSQQLYML 250
           ++RL+P QM+ RR+KGLCYNCDD++ PGH CKS +L+++
Sbjct: 274 VQRLSPSQMKERRDKGLCYNCDDKWAPGHKCKSARLFIM 312


>emb|CAN76938.1| hypothetical protein VITISV_025425 [Vitis vinifera]
          Length = 446

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/71 (36%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
 Frame = +2

Query: 32  LQKLQFHPTRTPNNISLSNLQVLNYNKSTTTVPL-----IKRLTPVQMRARREKGLCYNC 196
           L ++++H     ++ +L   + ++ N + T+ PL     I+RL+P +M+ RR+KGLC+NC
Sbjct: 303 LYEVKYHKR---SSFNLEPKKTVSTNSTVTSRPLSSTPAIRRLSPTEMKERRDKGLCFNC 359

Query: 197 DDQYKPGHHCK 229
           D+++ PGH CK
Sbjct: 360 DEKFAPGHRCK 370


>ref|XP_004160268.1| PREDICTED: uncharacterized protein LOC101232747 [Cucumis sativus]
          Length = 701

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/62 (45%), Positives = 38/62 (61%)
 Frame = +2

Query: 53  PTRTPNNISLSNLQVLNYNKSTTTVPLIKRLTPVQMRARREKGLCYNCDDQYKPGHHCKS 232
           P R+ NN   S LQ  N  K     P IKRL+  + RAR +KGLC+ C+++Y PGH CK 
Sbjct: 191 PKRSENN---SKLQGKNEKKKD---PPIKRLSDTEFRARLDKGLCFRCNEKYSPGHRCKG 244

Query: 233 QQ 238
           ++
Sbjct: 245 RE 246


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