BLASTX nr result
ID: Coptis24_contig00019834
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019834 (332 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio... 56 3e-06 ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2... 56 3e-06 emb|CBI32503.3| unnamed protein product [Vitis vinifera] 56 3e-06 emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] 56 3e-06 >ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Vitis vinifera] Length = 407 Score = 56.2 bits (134), Expect = 3e-06 Identities = 25/50 (50%), Positives = 36/50 (72%) Frame = +3 Query: 48 VTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQKTRIS 197 ++KGW EFV DN+L E D+CVFEL++ + LKV+IFR D + +T+ S Sbjct: 357 LSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLDDARVETQSS 406 >ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1| predicted protein [Populus trichocarpa] Length = 321 Score = 56.2 bits (134), Expect = 3e-06 Identities = 26/65 (40%), Positives = 39/65 (60%) Frame = +3 Query: 3 RTWPVSGSFYNQYYLVTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQ 182 + WPV SF + + +GW EFV +N+L E D+C+FEL+ K LKV +FR +D Sbjct: 256 KQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELIHAKEIVLKVAVFRVLEDAAP 315 Query: 183 KTRIS 197 ++S Sbjct: 316 TGQLS 320 >emb|CBI32503.3| unnamed protein product [Vitis vinifera] Length = 355 Score = 56.2 bits (134), Expect = 3e-06 Identities = 25/50 (50%), Positives = 36/50 (72%) Frame = +3 Query: 48 VTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQKTRIS 197 ++KGW EFV DN+L E D+CVFEL++ + LKV+IFR D + +T+ S Sbjct: 305 LSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLDDARVETQSS 354 >emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] Length = 563 Score = 56.2 bits (134), Expect = 3e-06 Identities = 25/50 (50%), Positives = 36/50 (72%) Frame = +3 Query: 48 VTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQKTRIS 197 ++KGW EFV DN+L E D+CVFEL++ + LKV+IFR D + +T+ S Sbjct: 513 LSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLDDARVETQSS 562