BLASTX nr result

ID: Coptis24_contig00019834 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019834
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    56   3e-06
ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               56   3e-06
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    56   3e-06

>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/50 (50%), Positives = 36/50 (72%)
 Frame = +3

Query: 48  VTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQKTRIS 197
           ++KGW EFV DN+L E D+CVFEL++ +   LKV+IFR   D + +T+ S
Sbjct: 357 LSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLDDARVETQSS 406


>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/65 (40%), Positives = 39/65 (60%)
 Frame = +3

Query: 3   RTWPVSGSFYNQYYLVTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQ 182
           + WPV  SF +    + +GW EFV +N+L E D+C+FEL+  K   LKV +FR  +D   
Sbjct: 256 KQWPVRCSFKDGKAKLGQGWTEFVWENNLEEGDVCIFELIHAKEIVLKVAVFRVLEDAAP 315

Query: 183 KTRIS 197
             ++S
Sbjct: 316 TGQLS 320


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/50 (50%), Positives = 36/50 (72%)
 Frame = +3

Query: 48  VTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQKTRIS 197
           ++KGW EFV DN+L E D+CVFEL++ +   LKV+IFR   D + +T+ S
Sbjct: 305 LSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLDDARVETQSS 354


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/50 (50%), Positives = 36/50 (72%)
 Frame = +3

Query: 48  VTKGWKEFVSDNHLVEDDICVFELVDRKHKKLKVTIFRASQDPKQKTRIS 197
           ++KGW EFV DN+L E D+CVFEL++ +   LKV+IFR   D + +T+ S
Sbjct: 513 LSKGWTEFVKDNNLEEGDVCVFELINMEDVVLKVSIFRVLDDARVETQSS 562


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