BLASTX nr result
ID: Coptis24_contig00019815
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019815 (549 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002325438.1| cationic amino acid transporter [Populus tri... 184 1e-44 gb|AAN77151.1| fiber protein Fb12 [Gossypium barbadense] 182 3e-44 ref|XP_002319189.1| cationic amino acid transporter [Populus tri... 177 1e-42 tpg|DAA47584.1| TPA: hypothetical protein ZEAMMB73_217051 [Zea m... 176 2e-42 ref|NP_198510.2| cationic amino acid transporter 3 [Arabidopsis ... 175 5e-42 >ref|XP_002325438.1| cationic amino acid transporter [Populus trichocarpa] gi|222862313|gb|EEE99819.1| cationic amino acid transporter [Populus trichocarpa] Length = 641 Score = 184 bits (466), Expect = 1e-44 Identities = 83/117 (70%), Positives = 99/117 (84%) Frame = -1 Query: 549 LPSFARISVCAVGGMLLLCGLFILYWVDQDDARHSFGHAGGFLCPFVPLLPIVCILVNVY 370 LPS R + C VGG LLL GL +L ++QDDARHSFGH+GGF+CPFVPLLPIVCILVN+Y Sbjct: 525 LPSPLRFTTCGVGGALLLSGLIVLTCIEQDDARHSFGHSGGFICPFVPLLPIVCILVNIY 584 Query: 369 LMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSSLRNAVYVTTSHAEEIYRSSSEHLA 199 L+INLGA TW RVS+W+I+G+ VY+FYGR HSSLR+AVYV +HA+EIYRSS E LA Sbjct: 585 LLINLGAATWTRVSVWLIVGVLVYVFYGRKHSSLRDAVYVPATHADEIYRSSGESLA 641 >gb|AAN77151.1| fiber protein Fb12 [Gossypium barbadense] Length = 117 Score = 182 bits (462), Expect = 3e-44 Identities = 80/117 (68%), Positives = 100/117 (85%) Frame = -1 Query: 549 LPSFARISVCAVGGMLLLCGLFILYWVDQDDARHSFGHAGGFLCPFVPLLPIVCILVNVY 370 +PS R++ C VGG+LLL GL +L +DQDDARH+FGH GGF+CPFVPLLPIVCIL+NVY Sbjct: 1 IPSLIRLTCCGVGGLLLLSGLIVLTCIDQDDARHNFGHTGGFICPFVPLLPIVCILINVY 60 Query: 369 LMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSSLRNAVYVTTSHAEEIYRSSSEHLA 199 L+INLGA TW RVS+W++IG+ VY+FYGR+HSSL +AVYV +HA+EIYRSS + LA Sbjct: 61 LLINLGAATWARVSVWLLIGVVVYVFYGRSHSSLLDAVYVPAAHADEIYRSSGDSLA 117 >ref|XP_002319189.1| cationic amino acid transporter [Populus trichocarpa] gi|222857565|gb|EEE95112.1| cationic amino acid transporter [Populus trichocarpa] Length = 640 Score = 177 bits (448), Expect = 1e-42 Identities = 79/117 (67%), Positives = 95/117 (81%) Frame = -1 Query: 549 LPSFARISVCAVGGMLLLCGLFILYWVDQDDARHSFGHAGGFLCPFVPLLPIVCILVNVY 370 LP R VC +GG LLL GL +L ++QDDARH+FGH+GGF+CPFVPLLPIVC LVN+Y Sbjct: 524 LPRLLRFIVCGIGGALLLFGLIVLTCIEQDDARHTFGHSGGFICPFVPLLPIVCFLVNIY 583 Query: 369 LMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSSLRNAVYVTTSHAEEIYRSSSEHLA 199 L+INLGA TW RVS+W+I+G+ VY FYGRTHSSL +AVYV +HA+EIYRSS E A Sbjct: 584 LLINLGAATWTRVSVWLIVGVLVYTFYGRTHSSLLDAVYVPATHADEIYRSSGESSA 640 >tpg|DAA47584.1| TPA: hypothetical protein ZEAMMB73_217051 [Zea mays] Length = 624 Score = 176 bits (446), Expect = 2e-42 Identities = 76/113 (67%), Positives = 94/113 (83%) Frame = -1 Query: 549 LPSFARISVCAVGGMLLLCGLFILYWVDQDDARHSFGHAGGFLCPFVPLLPIVCILVNVY 370 LP R SVC +GGMLLL GL +L W+DQDD RHSFGH+GGF+CPFVPLLP++CIL+N Y Sbjct: 506 LPFPVRCSVCVLGGMLLLAGLGMLCWIDQDDGRHSFGHSGGFICPFVPLLPVMCILINTY 565 Query: 369 LMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSSLRNAVYVTTSHAEEIYRSSS 211 L+INLG GTW+RV +W+++G+FVY+FYGRTHSSL + VYV + A EIY SSS Sbjct: 566 LLINLGGGTWMRVGVWLVMGVFVYIFYGRTHSSLTDVVYVPVAEANEIYGSSS 618 >ref|NP_198510.2| cationic amino acid transporter 3 [Arabidopsis thaliana] gi|75299609|sp|Q8GYB4.1|CAAT3_ARATH RecName: Full=Cationic amino acid transporter 3, mitochondrial; Flags: Precursor gi|26450566|dbj|BAC42395.1| putative cationic amino acid transporter [Arabidopsis thaliana] gi|332006747|gb|AED94130.1| cationic amino acid transporter 3 [Arabidopsis thaliana] Length = 609 Score = 175 bits (443), Expect = 5e-42 Identities = 76/117 (64%), Positives = 97/117 (82%) Frame = -1 Query: 549 LPSFARISVCAVGGMLLLCGLFILYWVDQDDARHSFGHAGGFLCPFVPLLPIVCILVNVY 370 LP R S+C VGG+ LL GL +L +DQDDARHSFGH+GGF+CPFVPLLPIVCIL+N+Y Sbjct: 493 LPGLLRYSLCGVGGLFLLVGLIVLICIDQDDARHSFGHSGGFICPFVPLLPIVCILINMY 552 Query: 369 LMINLGAGTWIRVSIWMIIGIFVYLFYGRTHSSLRNAVYVTTSHAEEIYRSSSEHLA 199 L++NLGA TW+RVS+W+ +G+ VY+FYGR +SSL NAVYV+T+H +EI R+S LA Sbjct: 553 LLVNLGAATWVRVSVWLFLGVVVYIFYGRRNSSLVNAVYVSTAHLQEIRRTSGHSLA 609