BLASTX nr result

ID: Coptis24_contig00019812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019812
         (1925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270815.1| PREDICTED: wall-associated receptor kinase-l...   370   e-100
ref|XP_002317644.1| predicted protein [Populus trichocarpa] gi|2...   332   2e-88
ref|XP_002518971.1| receptor protein kinase, putative [Ricinus c...   330   6e-88
ref|XP_002298989.1| predicted protein [Populus trichocarpa] gi|2...   330   8e-88
ref|XP_004166375.1| PREDICTED: probable receptor-like protein ki...   313   8e-83

>ref|XP_002270815.1| PREDICTED: wall-associated receptor kinase-like 10-like [Vitis
            vinifera]
          Length = 661

 Score =  370 bits (950), Expect = e-100
 Identities = 231/461 (50%), Positives = 286/461 (62%), Gaps = 16/461 (3%)
 Frame = +2

Query: 32   VCSWRSCLFVLSFFF--FPHMLTFSVASESVLIASXXXXXXXXIHALGGVAPAPSHIKAH 205
            VC   SC  +LS     FP+ L F VAS+S                       P+     
Sbjct: 29   VCGCWSCWRILSIILLTFPYQLAFCVASDS----------------------PPTRAAPP 66

Query: 206  TPIISPTGVVVLQGNN---HRRLITILSVSAAAGLFIILLSVLFIMGFFKFLRFHNRRRS 376
            TP+    G    Q  +     R++  L VSAA   F+ILL   F+MGF KFLRF  RRR 
Sbjct: 67   TPLFKTRGGGDTQSTDTLADPRIVAALCVSAA---FLILL---FVMGFLKFLRFKLRRRR 120

Query: 377  KRVEDAELPPLNTSNIAQRASSDLSICPPKKNGHPPKEFSWEEIVRLSRNFST--VIGQG 550
             RV   +      S I+   +      P KKNG   K FS EEI R++ NFS   VIG G
Sbjct: 121  NRVVIEDHMGGCESGISVVPNE-----PDKKNGSV-KRFSREEIERVTMNFSQTRVIGSG 174

Query: 551  GFSTIYLASFSDSSLGALKIHQHSERLDRIFKLELEILLRVRHENIVQLLGYCDEAADDG 730
            GFST+YLA F  S++ A+KIH   ERL+R+FK ELEILL + H+NIV+LLGY D+  +  
Sbjct: 175  GFSTVYLAHFPGSTMAAVKIHNGGERLNRVFKQELEILLHLDHDNIVKLLGYGDDREE-- 232

Query: 731  GSALVFEYLPNGNLQEKLQGIG----NGGLPWKSRAWIAFQLARAIDYLHDKCTLPIIHG 898
               LVFE++P G+LQE L        N  L WK+R  IAFQLA AI+YLH+KC LPI+HG
Sbjct: 233  -GVLVFEHVPKGSLQEMLHDSTGAKENSPLSWKNRMAIAFQLAEAIEYLHEKCALPIVHG 291

Query: 899  DIKTSNVLLDDQLNCKLCDFGFAKMGFSATVLPSSS-----LTLMGSPGYIDPHYLRTGI 1063
            DIK SN+LLD+ LNCKLCDFG AKMGFS+TVLP SS     + +MGSPGY+DPHYLRTGI
Sbjct: 292  DIKASNILLDEHLNCKLCDFGSAKMGFSSTVLPPSSSRMNQVMMMGSPGYVDPHYLRTGI 351

Query: 1064 ASKKNDVYSFGVILLELITGIEAFCSEKEQLLTTLAEPLLRGDKVDLQPLMAWGQDLSNS 1243
             SKKND+YSFGVILLEL+TG++AFCSE+EQ LT++A P+LR D   +  ++  G      
Sbjct: 352  PSKKNDIYSFGVILLELLTGMDAFCSEREQPLTSIAGPILR-DASQVGKVVDPGLG-GYF 409

Query: 1244 DLEEVMDVVSIAARCLMQQPSLRPSMADILATMTHKLSSIS 1366
            DLEE   + S+A  CL   P+LRPS +DIL TM HK+SSIS
Sbjct: 410  DLEEAKVMASMAGLCLGPSPTLRPSASDILQTMKHKISSIS 450


>ref|XP_002317644.1| predicted protein [Populus trichocarpa] gi|222860709|gb|EEE98256.1|
            predicted protein [Populus trichocarpa]
          Length = 310

 Score =  332 bits (851), Expect = 2e-88
 Identities = 177/311 (56%), Positives = 228/311 (73%), Gaps = 19/311 (6%)
 Frame = +2

Query: 491  FSWEEIVRLSRNFSTVIGQGGFSTIYLASFSDSSLGALKIHQHSERLDRIFKLELEILLR 670
            +SW EI RLS NFS ++G GGFST+YLA    SS+GA+KIH  S+ L+R+FK EL+ILL+
Sbjct: 1    YSWSEIERLSMNFSQIVGSGGFSTVYLAHLPGSSIGAIKIHCPSDYLNRVFKQELDILLQ 60

Query: 671  VRHENIVQLLGYCDEAADDGGSALVFEYLPNGNLQEKLQGIG--------NGGLPWKSRA 826
            ++H+NIV+LLGYCD   D+G  ALVFEY+ NG LQ+KL G G        +  L W+ R 
Sbjct: 61   LQHDNIVKLLGYCDNQ-DEG--ALVFEYVSNGTLQDKLHGAGREIRESSRSTVLSWRKRM 117

Query: 827  WIAFQLARAIDYLHDKCTLPIIHGDIKTSNVLLDDQLNCKLCDFGFAKMGFSATVLPSSS 1006
             IA+QLA+A++YLH+KC L I+HGDIK SN+LLD+QLNCKLCDFGFAKMGFS+TV+ S++
Sbjct: 118  AIAYQLAQALEYLHEKCPLQIVHGDIKPSNILLDEQLNCKLCDFGFAKMGFSSTVMSSNN 177

Query: 1007 --LTLMGSPGYIDPHYLRTGIASKKNDVYSFGVILLELITGIEAFCSEK--EQLLTTLAE 1174
                +MGSPGY DPHYLRTGIASKKNDVYS+GVI+LEL+TG+EAFC E+   QLLT++  
Sbjct: 178  RKQVMMGSPGYTDPHYLRTGIASKKNDVYSYGVIILELVTGMEAFCEERGQGQLLTSMIG 237

Query: 1175 PLLR-----GDKVDLQPLMAWGQDLSNSDLE--EVMDVVSIAARCLMQQPSLRPSMADIL 1333
            P+L+     GD+ +   +          D E  EVM ++S+AA CL Q PSLRPS A IL
Sbjct: 238  PILKSIIASGDECNPTKVAEMVDPKLGGDFEVKEVMAMISLAALCLGQSPSLRPSAAQIL 297

Query: 1334 ATMTHKLSSIS 1366
             T+   ++SIS
Sbjct: 298  HTIKENVASIS 308


>ref|XP_002518971.1| receptor protein kinase, putative [Ricinus communis]
            gi|223541958|gb|EEF43504.1| receptor protein kinase,
            putative [Ricinus communis]
          Length = 543

 Score =  330 bits (847), Expect = 6e-88
 Identities = 167/288 (57%), Positives = 216/288 (75%), Gaps = 5/288 (1%)
 Frame = +2

Query: 485  KEFSWEEIVRLSRNFSTVIGQGGFSTIYLASFSDSSLGALKIHQHSERLDRIFKLELEIL 664
            K++SW +I RL+ NF+ V+G GGFST++LA     +LGA+KIH +S+ L+R+FK EL+IL
Sbjct: 47   KKYSWNDIERLTMNFARVVGSGGFSTVFLARLPSLTLGAVKIHGNSDHLNRLFKQELDIL 106

Query: 665  LRVRHENIVQLLGYCDEAADDGGSALVFEYLPNGNLQEKLQGIGNGGLPWKSRAWIAFQL 844
            L++RH+NIV+LLG+CD   D    ALV EY+PNG+LQ+KL G     L WK R  IAFQL
Sbjct: 107  LQLRHDNIVKLLGHCD---DQDRGALVLEYVPNGSLQDKLHGAATEILSWKRRMAIAFQL 163

Query: 845  ARAIDYLHDKCTLPIIHGDIKTSNVLLDDQLNCKLCDFGFAKMGFSATVLPSS--SLTLM 1018
            A+A++YLHDKCTL I+HGDIK SN+LLD+ LNCKLCDFG AKMGFS+ V+PSS     +M
Sbjct: 164  AQALEYLHDKCTLQIVHGDIKASNILLDEHLNCKLCDFGSAKMGFSSMVMPSSRTKQVMM 223

Query: 1019 GSPGYIDPHYLRTGIASKKNDVYSFGVILLELITGIEAFCSEKEQLLTTLAEPLLRGDKV 1198
            GSPGY DPHYLRTG+ASKKND+YS+GVI+LEL+TG+EAFC E+ QLLT++  P+LR  + 
Sbjct: 224  GSPGYTDPHYLRTGMASKKNDIYSYGVIILELVTGMEAFCEERGQLLTSMMGPMLRNARD 283

Query: 1199 DLQPLMAWGQD---LSNSDLEEVMDVVSIAARCLMQQPSLRPSMADIL 1333
                 MA   D     + DL+E   ++S++A CL Q P LRPS A IL
Sbjct: 284  CEATKMAEMVDPRLAGDFDLKEARAMLSLSALCLGQSPVLRPSAAQIL 331


>ref|XP_002298989.1| predicted protein [Populus trichocarpa] gi|222846247|gb|EEE83794.1|
            predicted protein [Populus trichocarpa]
          Length = 365

 Score =  330 bits (846), Expect = 8e-88
 Identities = 183/371 (49%), Positives = 250/371 (67%), Gaps = 26/371 (7%)
 Frame = +2

Query: 332  MGFFKFLRFHNRRRSKRVEDAELPPLNTSNIAQRASSDLSICPPKKNGHPP----KEFSW 499
            MG F  LRF ++R +K+V+            A   S+DL     K + H      ++++W
Sbjct: 1    MGCFLGLRFRHKRLAKKVD-----------AASNGSNDLDPKKEKDSDHGTHGCVRKYNW 49

Query: 500  EEIVRLSRNFSTVIGQGGFSTIYLASFSDSSLGALKIHQHSERLDRIFKLELEILLRVRH 679
             EI +LS NFS ++G GGFST+YL     S+LGA+KIH  S+ L+R+FK EL+ILL+++H
Sbjct: 50   SEIEKLSMNFSQIVGSGGFSTVYLGHLPGSNLGAIKIHCPSDYLNRVFKQELDILLQLQH 109

Query: 680  ENIVQLLGYCDEAADDGGSALVFEYLPNGNLQEKLQG--------IGNGGLPWKSRAWIA 835
            +NIV+LLGYCD   D+G  ALVFEY+ NG LQ+KL G          +  + W++R  IA
Sbjct: 110  DNIVKLLGYCD-VQDEG--ALVFEYVSNGTLQDKLHGGEREIKKSSSSSVISWRNRMEIA 166

Query: 836  FQLARAIDYLHDKCTLPIIHGDIKTSNVLLDDQLNCKLCDFGFAKMGFSATVLPSSS--L 1009
            +QLA+A++YLH+KC L I+HGDIK SN+LLD+QLNCKLCDFGFAKMGFS+T++ S++   
Sbjct: 167  YQLAQALEYLHEKCPLQIVHGDIKPSNILLDEQLNCKLCDFGFAKMGFSSTIMTSNNRKQ 226

Query: 1010 TLMGSPGYIDPHYLRTGIASKKNDVYSFGVILLELITGIEAFCSEKE--QLLTTLAEPLL 1183
             +MGSPGY DPHYLRTGIASKKNDVYS+GVI+LEL+TG+EAFC E+E  QLL+++  P+L
Sbjct: 227  VMMGSPGYTDPHYLRTGIASKKNDVYSYGVIILELVTGMEAFCEEREQGQLLSSIMGPIL 286

Query: 1184 RGDKVDLQPLMAW----------GQDLSNSDLEEVMDVVSIAARCLMQQPSLRPSMADIL 1333
            +          A           G+D    +++EV  ++S+AA CL Q PSLRPS   IL
Sbjct: 287  KDIIASDNECKAMKEAEMVDPRLGEDF---EVKEVKVMLSLAALCLGQSPSLRPSATQIL 343

Query: 1334 ATMTHKLSSIS 1366
             T+   ++SIS
Sbjct: 344  HTIKENIASIS 354


>ref|XP_004166375.1| PREDICTED: probable receptor-like protein kinase At1g33260-like,
            partial [Cucumis sativus]
          Length = 324

 Score =  313 bits (803), Expect = 8e-83
 Identities = 168/310 (54%), Positives = 218/310 (70%), Gaps = 19/310 (6%)
 Frame = +2

Query: 491  FSWEEIVRLSRNFSTVIGQGGFSTIYLASFSDSSLGALKIHQHSERLDRIFKLELEILLR 670
            F W EI  L++NFST++G GGFS +YLA  +     A+KI   SERL+R+F+ EL+ILL+
Sbjct: 7    FRWTEIESLTKNFSTLVGSGGFSNVYLARTAPGMAAAVKILGASERLNRMFRQELDILLK 66

Query: 671  VRHENIVQLLGYCDEAADDGGSALVFEYLPNGNLQEKLQGIGNGG-LPWKSRAWIAFQLA 847
            +RH NIV  +GYCDE  D+G  ALVFEY+PNGNLQEKL        LPWK R  IAFQLA
Sbjct: 67   LRHRNIVNFVGYCDER-DEG--ALVFEYVPNGNLQEKLHRRPAASVLPWKIRLLIAFQLA 123

Query: 848  RAIDYLHDKCTLPIIHGDIKTSNVLLDDQLNCKLCDFGFAKMGFSATV-LPSSSLT---- 1012
            +AI+YLH+KC+L I+HGDIK+SN+LLD+QLNCKLCDFG AKMGFS+ V  PSSS +    
Sbjct: 124  QAIEYLHEKCSLQIVHGDIKSSNILLDEQLNCKLCDFGSAKMGFSSAVGNPSSSSSPSSP 183

Query: 1013 ------LMGSPGYIDPHYLRTGIASKKNDVYSFGVILLELITGIEAFCSEKEQLLTTLAE 1174
                  +MGSPGY DP YLRTGIASKKNDVYSFGV+LLEL+TG EAFCSEK Q+LT++  
Sbjct: 184  FRAKQLMMGSPGYTDPQYLRTGIASKKNDVYSFGVVLLELVTGKEAFCSEKGQILTSILP 243

Query: 1175 PLLR-------GDKVDLQPLMAWGQDLSNSDLEEVMDVVSIAARCLMQQPSLRPSMADIL 1333
            P +R        + ++L     WG+     +++E   ++ IAA C+ Q P+ RP + +++
Sbjct: 244  PAVRDGGGIKASEVLELVDPKLWGE----LEVDEAGALIGIAAECVRQPPAPRPRIGEVV 299

Query: 1334 ATMTHKLSSI 1363
              M  K+ S+
Sbjct: 300  EMMREKMGSV 309


Top