BLASTX nr result

ID: Coptis24_contig00019798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019798
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndr...   174   2e-41
ref|XP_002264759.2| PREDICTED: magnesium transporter NIPA2 [Viti...   173   4e-41
emb|CBI29728.3| unnamed protein product [Vitis vinifera]              173   4e-41
emb|CAN81783.1| hypothetical protein VITISV_002232 [Vitis vinifera]   173   4e-41
ref|XP_002526837.1| Non-imprinted in Prader-Willi/Angelman syndr...   172   6e-41

>ref|XP_002529005.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein,
           putative [Ricinus communis] gi|223531545|gb|EEF33375.1|
           Non-imprinted in Prader-Willi/Angelman syndrome region
           protein, putative [Ricinus communis]
          Length = 345

 Score =  174 bits (442), Expect = 2e-41
 Identities = 90/110 (81%), Positives = 98/110 (89%), Gaps = 3/110 (2%)
 Frame = +1

Query: 1   VLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTILASVIMFKDWDRQNATQIVTEMCGFVT 180
           V+TQMNYLNKALDTFNTAVVSPIYYVMFT+LTI+ASVIMFKDWDRQ+ TQIVTEMCGFVT
Sbjct: 235 VVTQMNYLNKALDTFNTAVVSPIYYVMFTSLTIVASVIMFKDWDRQSPTQIVTEMCGFVT 294

Query: 181 ILSGTFLLHKTNNMADG---VPGRIPKHIDEEDGFTSEGIPLRCQESLRS 321
           ILSGTFLLHKT +M DG   +P R+PKH  EED F +EGIPLR QESLRS
Sbjct: 295 ILSGTFLLHKTKDMVDGPTSLPVRLPKH-TEEDSFGAEGIPLRRQESLRS 343


>ref|XP_002264759.2| PREDICTED: magnesium transporter NIPA2 [Vitis vinifera]
          Length = 347

 Score =  173 bits (439), Expect = 4e-41
 Identities = 90/110 (81%), Positives = 97/110 (88%), Gaps = 4/110 (3%)
 Frame = +1

Query: 1   VLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTILASVIMFKDWDRQNATQIVTEMCGFVT 180
           V+TQMNYLNKALDTFNTAVVSPIYYVMFT+LTILASVIMFKDWDRQN TQIVTEMCGFVT
Sbjct: 237 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVT 296

Query: 181 ILSGTFLLHKTNNMADGVPG----RIPKHIDEEDGFTSEGIPLRCQESLR 318
           ILSGTFLLHKT +++DG+      R+ KHI EEDGF  EGIPLR QESLR
Sbjct: 297 ILSGTFLLHKTKDLSDGLSTSLSMRLSKHI-EEDGFGQEGIPLRRQESLR 345


>emb|CBI29728.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score =  173 bits (439), Expect = 4e-41
 Identities = 90/110 (81%), Positives = 97/110 (88%), Gaps = 4/110 (3%)
 Frame = +1

Query: 1   VLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTILASVIMFKDWDRQNATQIVTEMCGFVT 180
           V+TQMNYLNKALDTFNTAVVSPIYYVMFT+LTILASVIMFKDWDRQN TQIVTEMCGFVT
Sbjct: 223 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVT 282

Query: 181 ILSGTFLLHKTNNMADGVPG----RIPKHIDEEDGFTSEGIPLRCQESLR 318
           ILSGTFLLHKT +++DG+      R+ KHI EEDGF  EGIPLR QESLR
Sbjct: 283 ILSGTFLLHKTKDLSDGLSTSLSMRLSKHI-EEDGFGQEGIPLRRQESLR 331


>emb|CAN81783.1| hypothetical protein VITISV_002232 [Vitis vinifera]
          Length = 351

 Score =  173 bits (439), Expect = 4e-41
 Identities = 90/110 (81%), Positives = 97/110 (88%), Gaps = 4/110 (3%)
 Frame = +1

Query: 1   VLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTILASVIMFKDWDRQNATQIVTEMCGFVT 180
           V+TQMNYLNKALDTFNTAVVSPIYYVMFT+LTILASVIMFKDWDRQN TQIVTEMCGFVT
Sbjct: 241 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVT 300

Query: 181 ILSGTFLLHKTNNMADGVPG----RIPKHIDEEDGFTSEGIPLRCQESLR 318
           ILSGTFLLHKT +++DG+      R+ KHI EEDGF  EGIPLR QESLR
Sbjct: 301 ILSGTFLLHKTKDLSDGLSTSLSMRLSKHI-EEDGFGQEGIPLRRQESLR 349


>ref|XP_002526837.1| Non-imprinted in Prader-Willi/Angelman syndrome region protein,
           putative [Ricinus communis] gi|223533841|gb|EEF35572.1|
           Non-imprinted in Prader-Willi/Angelman syndrome region
           protein, putative [Ricinus communis]
          Length = 340

 Score =  172 bits (437), Expect = 6e-41
 Identities = 90/110 (81%), Positives = 95/110 (86%), Gaps = 4/110 (3%)
 Frame = +1

Query: 1   VLTQMNYLNKALDTFNTAVVSPIYYVMFTTLTILASVIMFKDWDRQNATQIVTEMCGFVT 180
           V+TQMNYLNKALDTFNTAVVSPIYYVMFT+LTILASVIMFKDWDRQN TQIVTEMCGFVT
Sbjct: 230 VITQMNYLNKALDTFNTAVVSPIYYVMFTSLTILASVIMFKDWDRQNPTQIVTEMCGFVT 289

Query: 181 ILSGTFLLHKTNNMADG----VPGRIPKHIDEEDGFTSEGIPLRCQESLR 318
           ILSGTFLLHKT +M +G    +P  IPKH  EEDGF  EGIPLR Q SLR
Sbjct: 290 ILSGTFLLHKTKDMVEGSSPSLPLSIPKH-SEEDGFQPEGIPLRRQASLR 338


Top