BLASTX nr result

ID: Coptis24_contig00019785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019785
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317422.1| predicted protein [Populus trichocarpa] gi|2...   168   5e-40
ref|XP_002283150.1| PREDICTED: epidermis-specific secreted glyco...   149   2e-34
dbj|BAD24818.1| cell attachment protein in somatic embryogenesis...   141   5e-32
ref|XP_004170214.1| PREDICTED: epidermis-specific secreted glyco...   130   8e-29
ref|XP_004146093.1| PREDICTED: epidermis-specific secreted glyco...   130   8e-29

>ref|XP_002317422.1| predicted protein [Populus trichocarpa] gi|222860487|gb|EEE98034.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  168 bits (425), Expect = 5e-40
 Identities = 74/100 (74%), Positives = 85/100 (85%)
 Frame = -3

Query: 415 CPRPQGLLGWSKTCAPPSLPPCKTGSQNIDYYKVVGVEHFTYEYSQGVGPMKLADCRERC 236
           CPRPQG LGWSK+CAPP LPPCK G+ N+DYYKVVGVEHF   Y++G GPMKL DCR +C
Sbjct: 316 CPRPQGFLGWSKSCAPPVLPPCKGGA-NVDYYKVVGVEHFLNGYNEGEGPMKLVDCRNKC 374

Query: 235 SKDCGCLGFFYREESSKCLLAPVLGTLAKVSNQTHVAYIK 116
           + DCGCLGFFY+EESSKCLLAPVLGTL  VS+ +HV +IK
Sbjct: 375 NNDCGCLGFFYKEESSKCLLAPVLGTLVGVSSPSHVGFIK 414


>ref|XP_002283150.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Vitis
           vinifera]
          Length = 451

 Score =  149 bits (376), Expect = 2e-34
 Identities = 65/103 (63%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = -3

Query: 415 CPRPQGLLGWSKTCAPPSLPPCKTGSQNIDYYKVVGVEHFTYEY-SQGVGPMKLADCRER 239
           CP P+GLLGWS++CAPP LPPCK G+  +DYYK++GVE+F   Y   G GPMK+ +CRER
Sbjct: 349 CPSPKGLLGWSESCAPPRLPPCKGGAAKVDYYKIIGVENFLNPYLDDGKGPMKVEECRER 408

Query: 238 CSKDCGCLGFFYREESSKCLLAPVLGTLAKVSNQTHVAYIKMS 110
           CS+DC CLGF Y+E++SKCLLAP+L TL K  N T V YIK S
Sbjct: 409 CSRDCKCLGFIYKEDTSKCLLAPLLATLIKDENATSVGYIKYS 451


>dbj|BAD24818.1| cell attachment protein in somatic embryogenesis [Daucus carota]
           gi|55785663|dbj|BAD72577.1| cell attachment protein in
           somatic embryogenesis [Daucus carota]
          Length = 443

 Score =  141 bits (356), Expect = 5e-32
 Identities = 67/103 (65%), Positives = 75/103 (72%)
 Frame = -3

Query: 415 CPRPQGLLGWSKTCAPPSLPPCKTGSQNIDYYKVVGVEHFTYEYSQGVGPMKLADCRERC 236
           CP   GL GWSKTCAPP LP C  G+  IDYYKV GVEHFT   + G     LADCR++C
Sbjct: 343 CPTANGLTGWSKTCAPPVLPACGKGA--IDYYKVAGVEHFTNGVTSGTPRSTLADCRKKC 400

Query: 235 SKDCGCLGFFYREESSKCLLAPVLGTLAKVSNQTHVAYIKMSK 107
             DC C+GFFYREESS CLLA VLG L +V+N +HVAYIKMSK
Sbjct: 401 DSDCKCVGFFYREESSTCLLASVLGALNQVANASHVAYIKMSK 443


>ref|XP_004170214.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like
           [Cucumis sativus]
          Length = 449

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/103 (58%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = -3

Query: 415 CPRPQGLLGWSKTCAPPSLPPCKTGSQNIDYYKVVGVEHFTYEY-SQGVGPMKLADCRER 239
           CP P+GLLGWS+ CAPP  P C  G +   YYK+VGVEHF   Y + G GPMK+ DCR +
Sbjct: 347 CPSPKGLLGWSERCAPPKTPACG-GKEKFGYYKIVGVEHFLNPYKNDGEGPMKVGDCRAK 405

Query: 238 CSKDCGCLGFFYREESSKCLLAPVLGTLAKVSNQTHVAYIKMS 110
           C +DC CLGF Y+E SSKCL  P+LGTL K  N + V YIK S
Sbjct: 406 CDRDCKCLGFIYKEYSSKCLRVPLLGTLIKDINSSSVGYIKYS 448


>ref|XP_004146093.1| PREDICTED: epidermis-specific secreted glycoprotein EP1-like
           [Cucumis sativus]
          Length = 449

 Score =  130 bits (328), Expect = 8e-29
 Identities = 60/103 (58%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
 Frame = -3

Query: 415 CPRPQGLLGWSKTCAPPSLPPCKTGSQNIDYYKVVGVEHFTYEY-SQGVGPMKLADCRER 239
           CP P+GLLGWS+ CAPP  P C  G +   YYK+VGVEHF   Y + G GPMK+ DCR +
Sbjct: 347 CPSPKGLLGWSERCAPPKTPACG-GKEKFGYYKIVGVEHFLNPYKNDGEGPMKVGDCRAK 405

Query: 238 CSKDCGCLGFFYREESSKCLLAPVLGTLAKVSNQTHVAYIKMS 110
           C +DC CLGF Y+E SSKCL  P+LGTL K  N + V YIK S
Sbjct: 406 CDRDCKCLGFIYKEYSSKCLRVPLLGTLIKDINSSSVGYIKYS 448


Top