BLASTX nr result
ID: Coptis24_contig00019780
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019780 (566 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 91 1e-16 ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2... 90 3e-16 ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2... 88 1e-15 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2... 87 1e-15 >gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1447 Score = 90.9 bits (224), Expect = 1e-16 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 1/162 (0%) Frame = -3 Query: 549 LKNIREKVKWYKLIWGRICVPKHSIA-WQLFSGSLSTQDRLIKKNILNHSECIFCRNARE 373 ++ KV WYK +W PK S W LST DR+ ++ C+FC + + Sbjct: 1271 IRTTATKVTWYKGVWFYQATPKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNHPTK 1330 Query: 372 NSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAMVCAV 193 + HLFF+CPY+ EVW + I LT H ++N E+ ++R A Sbjct: 1331 SRDHLFFNCPYSSEVWTVTAKNI-LTTRFTTDWHLLLNTVSSLQQNRVENFLVRYAFQAS 1389 Query: 192 IYAVWNERNCRRFKNRSRSASQVLNDIMKKMQQAIKEVENTG 67 +Y++W+ERN RR N SA++++ I K+++ + + G Sbjct: 1390 VYSIWSERNRRRHGNTLHSATRLIGWIDKQVRNILSSIRIKG 1431 >ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 89.7 bits (221), Expect = 3e-16 Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%) Frame = -3 Query: 561 AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385 A+ L+ R+ V+W+ ++W + VP+HS + W L+TQD+L + I + C C Sbjct: 1202 AWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCL 1261 Query: 384 NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAM 205 E+ +HLFF+C YTK +W R + + + EW R ++ + R + Sbjct: 1262 RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFVNFSRKL 1320 Query: 204 -VCAVIYAVWNERNCRRFKNRSRSASQVLNDI-------MKKMQQAIKEVENT 70 A +Y VW ERN R F SR+ + VLN I + M+ + ENT Sbjct: 1321 SFAATVYHVWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNENT 1373 >ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 87.8 bits (216), Expect = 1e-15 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 2/152 (1%) Frame = -3 Query: 561 AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385 A+ L+ R+ V+W+ ++W + VP+HS + W + L+TQD+L + I + C C Sbjct: 862 AWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCL 921 Query: 384 NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAM 205 E+ +HLFF+C YTK +W R + + + EW R ++ + R + Sbjct: 922 RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFINFSRKL 980 Query: 204 -VCAVIYAVWNERNCRRFKNRSRSASQVLNDI 112 A +Y VW ERN R F SR+++ V N I Sbjct: 981 SFAATVYHVWQERNARIFAGLSRTSNLVFNQI 1012 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 87.4 bits (215), Expect = 1e-15 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%) Frame = -3 Query: 561 AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385 A+ L+ R+ V+W+ ++W + VP+HS + W L+TQD+L + I + C C Sbjct: 329 AWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCL 388 Query: 384 NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRIT-RKNTTESEVIRA 208 E+ +HLFF+C YTK +W R + + + EW R ++ + + + Sbjct: 389 RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFVNFSCKL 447 Query: 207 MVCAVIYAVWNERNCRRFKNRSRSASQVLNDI-------MKKMQQAIKEVENT 70 A +Y VW ERN R F SR+ + VLN I + M+ + ENT Sbjct: 448 SFAATVYHVWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNENT 500 >ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1| predicted protein [Populus trichocarpa] Length = 331 Score = 87.4 bits (215), Expect = 1e-15 Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 2/152 (1%) Frame = -3 Query: 561 AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385 A+ L+ R V+W+ ++W + VP+HS + W + L+TQD+L + I + C C Sbjct: 147 AWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCL 206 Query: 384 NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAM 205 E+ +HLFF+C YTK +W R + + + EW R ++ + R + Sbjct: 207 RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFVNFSRKL 265 Query: 204 -VCAVIYAVWNERNCRRFKNRSRSASQVLNDI 112 A +Y VW ERN R F SR+++ V N I Sbjct: 266 SFAATVYHVWQERNARIFAGLSRTSNLVFNQI 297