BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019780
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD12028.1| putative non-LTR retroelement reverse transcripta...    91   1e-16
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    90   3e-16
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-15
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15

>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1447

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
 Frame = -3

Query: 549  LKNIREKVKWYKLIWGRICVPKHSIA-WQLFSGSLSTQDRLIKKNILNHSECIFCRNARE 373
            ++    KV WYK +W     PK S   W      LST DR+     ++   C+FC +  +
Sbjct: 1271 IRTTATKVTWYKGVWFYQATPKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCNHPTK 1330

Query: 372  NSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAMVCAV 193
            +  HLFF+CPY+ EVW    + I LT       H         ++N  E+ ++R    A 
Sbjct: 1331 SRDHLFFNCPYSSEVWTVTAKNI-LTTRFTTDWHLLLNTVSSLQQNRVENFLVRYAFQAS 1389

Query: 192  IYAVWNERNCRRFKNRSRSASQVLNDIMKKMQQAIKEVENTG 67
            +Y++W+ERN RR  N   SA++++  I K+++  +  +   G
Sbjct: 1390 VYSIWSERNRRRHGNTLHSATRLIGWIDKQVRNILSSIRIKG 1431


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
 Frame = -3

Query: 561  AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385
            A+  L+  R+ V+W+ ++W +  VP+HS + W      L+TQD+L +  I   + C  C 
Sbjct: 1202 AWEHLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLYRFGIHGPNRCSLCL 1261

Query: 384  NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAM 205
               E+ +HLFF+C YTK +W     R  +   + +   EW R   ++    +     R +
Sbjct: 1262 RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFVNFSRKL 1320

Query: 204  -VCAVIYAVWNERNCRRFKNRSRSASQVLNDI-------MKKMQQAIKEVENT 70
               A +Y VW ERN R F   SR+ + VLN I       +  M+  +   ENT
Sbjct: 1321 SFAATVYHVWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNENT 1373


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
 Frame = -3

Query: 561  AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385
            A+  L+  R+ V+W+ ++W +  VP+HS + W +    L+TQD+L +  I   + C  C 
Sbjct: 862  AWEQLRRHRQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCL 921

Query: 384  NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAM 205
               E+ +HLFF+C YTK +W     R  +   + +   EW R   ++    +     R +
Sbjct: 922  RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFINFSRKL 980

Query: 204  -VCAVIYAVWNERNCRRFKNRSRSASQVLNDI 112
               A +Y VW ERN R F   SR+++ V N I
Sbjct: 981  SFAATVYHVWQERNARIFAGLSRTSNLVFNQI 1012


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
 Frame = -3

Query: 561 AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385
           A+  L+  R+ V+W+ ++W +  VP+HS + W      L+TQD+L +  I   + C  C 
Sbjct: 329 AWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLHRFGIHGPNRCSLCL 388

Query: 384 NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRIT-RKNTTESEVIRA 208
              E+ +HLFF+C YTK +W     R  +   + +   EW R   ++    +  +   + 
Sbjct: 389 RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFVNFSCKL 447

Query: 207 MVCAVIYAVWNERNCRRFKNRSRSASQVLNDI-------MKKMQQAIKEVENT 70
              A +Y VW ERN R F   SR+ + VLN I       +  M+  +   ENT
Sbjct: 448 SFAATVYHVWQERNARIFAGMSRTPNLVLNQIECIIRDKLDLMRNVVPTNENT 500


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
 Frame = -3

Query: 561 AYMGLKNIREKVKWYKLIWGRICVPKHS-IAWQLFSGSLSTQDRLIKKNILNHSECIFCR 385
           A+  L+  R  V+W+ ++W +  VP+HS + W +    L+TQD+L +  I   + C  C 
Sbjct: 147 AWEQLRRHRHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKLHRFGIHGPNRCSLCL 206

Query: 384 NARENSHHLFFDCPYTKEVWAGAKRRIGLTDTVLQSNHEWYRIFRITRKNTTESEVIRAM 205
              E+ +HLFF+C YTK +W     R  +   + +   EW R   ++    +     R +
Sbjct: 207 RNNEDHNHLFFECSYTKAIWWDVCDRCDI-PRMTKGWDEWIRWATVSWHGKSFVNFSRKL 265

Query: 204 -VCAVIYAVWNERNCRRFKNRSRSASQVLNDI 112
              A +Y VW ERN R F   SR+++ V N I
Sbjct: 266 SFAATVYHVWQERNARIFAGLSRTSNLVFNQI 297