BLASTX nr result

ID: Coptis24_contig00019763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019763
         (178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884631.1| hypothetical protein ARALYDRAFT_896875 [Arab...    67   2e-09
ref|NP_974245.1| GPI transamidase component PIG-S-related protei...    65   6e-09
ref|NP_187374.2| GPI transamidase component PIG-S-related protei...    65   6e-09
ref|XP_004160758.1| PREDICTED: GPI transamidase component PIG-S-...    65   7e-09
ref|XP_004138391.1| PREDICTED: GPI transamidase component PIG-S-...    65   7e-09

>ref|XP_002884631.1| hypothetical protein ARALYDRAFT_896875 [Arabidopsis lyrata subsp.
           lyrata] gi|297330471|gb|EFH60890.1| hypothetical protein
           ARALYDRAFT_896875 [Arabidopsis lyrata subsp. lyrata]
          Length = 599

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = +1

Query: 58  FDPKTMRKTRPGLKRLILITSVLFSFISGLPFLLKSIEIY 177
           FDPKTMR T+PGLKRL + TSVLFSF+ G+PFL KS+EIY
Sbjct: 16  FDPKTMRSTKPGLKRLFITTSVLFSFLLGVPFLWKSVEIY 55


>ref|NP_974245.1| GPI transamidase component PIG-S-related protein [Arabidopsis
           thaliana] gi|332640988|gb|AEE74509.1| GPI transamidase
           component PIG-S-related protein [Arabidopsis thaliana]
          Length = 454

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +1

Query: 58  FDPKTMRKTRPGLKRLILITSVLFSFISGLPFLLKSIEIY 177
           FDPKTMR T+PGLKRL + +SVLFSF+ G+PFL KS+EIY
Sbjct: 16  FDPKTMRSTKPGLKRLFITSSVLFSFLLGVPFLWKSVEIY 55


>ref|NP_187374.2| GPI transamidase component PIG-S-related protein [Arabidopsis
           thaliana] gi|17065106|gb|AAL32707.1| Unknown protein
           [Arabidopsis thaliana] gi|22136078|gb|AAM91117.1|
           unknown protein [Arabidopsis thaliana]
           gi|332640987|gb|AEE74508.1| GPI transamidase component
           PIG-S-related protein [Arabidopsis thaliana]
          Length = 599

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +1

Query: 58  FDPKTMRKTRPGLKRLILITSVLFSFISGLPFLLKSIEIY 177
           FDPKTMR T+PGLKRL + +SVLFSF+ G+PFL KS+EIY
Sbjct: 16  FDPKTMRSTKPGLKRLFITSSVLFSFLLGVPFLWKSVEIY 55


>ref|XP_004160758.1| PREDICTED: GPI transamidase component PIG-S-like [Cucumis sativus]
          Length = 630

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +1

Query: 22  KMDSTKEEAELL-FDPKTMRKTRPGLKRLILITSVLFSFISGLPFLLKSIEIY 177
           ++DS   EA L  FDPKTMR T+PG KRLIL  SV  SF+ GLPFL KS+EIY
Sbjct: 12  QLDSGSSEAGLSQFDPKTMRNTKPGFKRLILTISVFSSFLLGLPFLWKSVEIY 64


>ref|XP_004138391.1| PREDICTED: GPI transamidase component PIG-S-like [Cucumis sativus]
          Length = 609

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/53 (64%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +1

Query: 22  KMDSTKEEAELL-FDPKTMRKTRPGLKRLILITSVLFSFISGLPFLLKSIEIY 177
           ++DS   EA L  FDPKTMR T+PG KRLIL  SV  SF+ GLPFL KS+EIY
Sbjct: 12  QLDSGSSEAGLSQFDPKTMRNTKPGFKRLILTISVFSSFLLGLPFLWKSVEIY 64


Top