BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019762
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera] gi|2...    72   1e-10
gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]                61   3e-07
ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group] g...    61   3e-07
ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium di...    60   9e-07
ref|XP_004141934.1| PREDICTED: cyclin-H1-1-like [Cucumis sativus...    58   3e-06

>ref|XP_002284178.1| PREDICTED: cyclin-H1-1 [Vitis vinifera]
           gi|296089659|emb|CBI39478.3| unnamed protein product
           [Vitis vinifera]
          Length = 335

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +2

Query: 2   RYLGSIISRQQSMHTSSELIESLDLINSLLMRFSIPSSDDMKPIDRKLKYCLDPSLQD 175
           RYL SI+SRQ   H  SEL ESL+ I+S +M+  +P+++DMK IDRKLK+CLDPS  D
Sbjct: 251 RYLSSILSRQDFSHAFSELTESLNAIDSWVMKHQVPTTEDMKHIDRKLKFCLDPSSHD 308


>gb|AAR07076.1| cyclin H-1 [Oryza sativa Japonica Group]
          Length = 328

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +2

Query: 2   RYLGSIISRQQSMHTSSELIESLDLINSLLMRFSIPSSDDMKPIDRKLKYCLDPSLQDD 178
           RYL S+ SRQ S     + + S+++IN L+ +  IP+  DM+ IDRKLK+CLDPS QD+
Sbjct: 249 RYLESVFSRQHSDCPIEQFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQDE 307


>ref|NP_001051203.1| Os03g0737600 [Oryza sativa Japonica Group]
           gi|122246784|sp|Q10D80.1|CCH11_ORYSJ RecName:
           Full=Cyclin-H1-1; Short=CycH1;1; AltName:
           Full=Cyclin-H-1; Short=CycH-1 gi|9796396|dbj|BAB11694.1|
           cyclin H-1 [Oryza sativa] gi|108710969|gb|ABF98764.1|
           Cyclin, N-terminal domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113549674|dbj|BAF13117.1| Os03g0737600 [Oryza sativa
           Japonica Group] gi|215678822|dbj|BAG95259.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215740606|dbj|BAG97262.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218193718|gb|EEC76145.1| hypothetical protein
           OsI_13435 [Oryza sativa Indica Group]
           gi|222625758|gb|EEE59890.1| hypothetical protein
           OsJ_12494 [Oryza sativa Japonica Group]
          Length = 330

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +2

Query: 2   RYLGSIISRQQSMHTSSELIESLDLINSLLMRFSIPSSDDMKPIDRKLKYCLDPSLQDD 178
           RYL S+ SRQ S     + + S+++IN L+ +  IP+  DM+ IDRKLK+CLDPS QD+
Sbjct: 249 RYLESVFSRQHSDCPIEQFVGSINMINYLVEQLKIPTPKDMRHIDRKLKHCLDPSSQDE 307


>ref|XP_003560004.1| PREDICTED: cyclin-H1-1-like [Brachypodium distachyon]
          Length = 328

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +2

Query: 2   RYLGSIISRQQSMHTSSELIESLDLINSLLMRFSIPSSDDMKPIDRKLKYCLDPSLQDD 178
           RYLGS+ SRQ+S     + +++++ IN L+ +  IP+  DM+  DRKLK+CLDPS  D+
Sbjct: 249 RYLGSVFSRQKSNCPVEQFVQTINAINYLVDQLQIPTLKDMRHADRKLKHCLDPSSHDE 307


>ref|XP_004141934.1| PREDICTED: cyclin-H1-1-like [Cucumis sativus]
           gi|449524742|ref|XP_004169380.1| PREDICTED:
           cyclin-H1-1-like [Cucumis sativus]
          Length = 332

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = +2

Query: 5   YLGSIISRQQSMHTSSELIESLDLINSLLMRFSIPSSDDMKPIDRKLKYC 154
           YL SI+SRQ S HT SEL E ++ I SL+ R++ PS  D+K I+RKLK C
Sbjct: 249 YLDSILSRQNSTHTISELYEGINAIESLVNRYAFPSEKDLKHINRKLKSC 298