BLASTX nr result

ID: Coptis24_contig00019738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019738
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-...   268   3e-70
emb|CBI33563.3| unnamed protein product [Vitis vinifera]              268   3e-70
ref|XP_004157175.1| PREDICTED: methionyl-tRNA formyltransferase-...   263   1e-68
ref|NP_001242068.1| uncharacterized protein LOC100798000 [Glycin...   260   9e-68
ref|XP_004140739.1| PREDICTED: methionyl-tRNA formyltransferase-...   259   2e-67

>ref|XP_002270626.1| PREDICTED: methionyl-tRNA formyltransferase-like [Vitis vinifera]
          Length = 365

 Score =  268 bits (685), Expect = 3e-70
 Identities = 131/162 (80%), Positives = 147/162 (90%)
 Frame = -3

Query: 486 ELFLSNLDALQPEVCITAAYGNILPSKFLKLPSLGTINIHPSILPLYRGAAPVQRALQDG 307
           E+FLS+L ALQPE+CITAAYGNILP KFL++P +GT+NIHPS+LPLYRGAAPVQRALQDG
Sbjct: 110 EIFLSSLRALQPELCITAAYGNILPRKFLEIPPMGTVNIHPSLLPLYRGAAPVQRALQDG 169

Query: 306 VKETGVSLVYTVRAMDAGPVIACERVEVDDHVKAPELLVLLFDQGSKLLIRELPSILDGS 127
           VKETGVSL +TVRA+DAGPVIACER EVDD +KA +LL LLF QGSKLLI ELPSI DGS
Sbjct: 170 VKETGVSLAFTVRALDAGPVIACERFEVDDQIKATDLLALLFSQGSKLLIHELPSIFDGS 229

Query: 126 ARLKAQEQDNSKATLAPKLNPEDAWLSFDQEAVVLHNKVRAF 1
           A LKAQ QD+SKATLAPK+ PE++WLSFDQEA VLHNKVRAF
Sbjct: 230 ANLKAQPQDDSKATLAPKITPEESWLSFDQEASVLHNKVRAF 271


>emb|CBI33563.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  268 bits (685), Expect = 3e-70
 Identities = 131/162 (80%), Positives = 147/162 (90%)
 Frame = -3

Query: 486 ELFLSNLDALQPEVCITAAYGNILPSKFLKLPSLGTINIHPSILPLYRGAAPVQRALQDG 307
           E+FLS+L ALQPE+CITAAYGNILP KFL++P +GT+NIHPS+LPLYRGAAPVQRALQDG
Sbjct: 137 EIFLSSLRALQPELCITAAYGNILPRKFLEIPPMGTVNIHPSLLPLYRGAAPVQRALQDG 196

Query: 306 VKETGVSLVYTVRAMDAGPVIACERVEVDDHVKAPELLVLLFDQGSKLLIRELPSILDGS 127
           VKETGVSL +TVRA+DAGPVIACER EVDD +KA +LL LLF QGSKLLI ELPSI DGS
Sbjct: 197 VKETGVSLAFTVRALDAGPVIACERFEVDDQIKATDLLALLFSQGSKLLIHELPSIFDGS 256

Query: 126 ARLKAQEQDNSKATLAPKLNPEDAWLSFDQEAVVLHNKVRAF 1
           A LKAQ QD+SKATLAPK+ PE++WLSFDQEA VLHNKVRAF
Sbjct: 257 ANLKAQPQDDSKATLAPKITPEESWLSFDQEASVLHNKVRAF 298


>ref|XP_004157175.1| PREDICTED: methionyl-tRNA formyltransferase-like [Cucumis sativus]
          Length = 368

 Score =  263 bits (672), Expect = 1e-68
 Identities = 127/162 (78%), Positives = 148/162 (91%)
 Frame = -3

Query: 486 ELFLSNLDALQPEVCITAAYGNILPSKFLKLPSLGTINIHPSILPLYRGAAPVQRALQDG 307
           ++FLS L AL+PE+CITAAYGNILP+KFL +P+LGT+NIHPS+LPLYRGAAPVQRALQDG
Sbjct: 103 DMFLSTLKALEPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDG 162

Query: 306 VKETGVSLVYTVRAMDAGPVIACERVEVDDHVKAPELLVLLFDQGSKLLIRELPSILDGS 127
           VKETGVSL +TVRA+DAGP+IA E++EVD+H+KAP+LL LLF +GSKLLIRELPSILDGS
Sbjct: 163 VKETGVSLAFTVRALDAGPIIASEKLEVDEHIKAPDLLALLFLEGSKLLIRELPSILDGS 222

Query: 126 ARLKAQEQDNSKATLAPKLNPEDAWLSFDQEAVVLHNKVRAF 1
           A  KAQ QD SKAT APK+ P++AWLSFDQEA VLHNKVRAF
Sbjct: 223 AEKKAQPQDESKATKAPKIAPDEAWLSFDQEACVLHNKVRAF 264


>ref|NP_001242068.1| uncharacterized protein LOC100798000 [Glycine max]
           gi|255644416|gb|ACU22713.1| unknown [Glycine max]
          Length = 353

 Score =  260 bits (664), Expect = 9e-68
 Identities = 127/162 (78%), Positives = 146/162 (90%)
 Frame = -3

Query: 486 ELFLSNLDALQPEVCITAAYGNILPSKFLKLPSLGTINIHPSILPLYRGAAPVQRALQDG 307
           + FLSNL ALQP +CITAAYGNILP+ FL +PS GT+NIHPS+LPLYRGAAPVQRALQDG
Sbjct: 100 DTFLSNLKALQPHLCITAAYGNILPTDFLHIPSFGTVNIHPSLLPLYRGAAPVQRALQDG 159

Query: 306 VKETGVSLVYTVRAMDAGPVIACERVEVDDHVKAPELLVLLFDQGSKLLIRELPSILDGS 127
           VKETGVSL +TVRA+DAGPVIA E ++VDD +KAP+LL LLF +GSKLLI ELPSILDGS
Sbjct: 160 VKETGVSLAFTVRALDAGPVIATETIQVDDQIKAPDLLELLFHKGSKLLIGELPSILDGS 219

Query: 126 ARLKAQEQDNSKATLAPKLNPEDAWLSFDQEAVVLHNKVRAF 1
           AR+KAQ QD+SKATLAPK+NP+++WL FDQEA VLHNKVRAF
Sbjct: 220 ARVKAQPQDDSKATLAPKINPDESWLFFDQEASVLHNKVRAF 261


>ref|XP_004140739.1| PREDICTED: methionyl-tRNA formyltransferase-like [Cucumis sativus]
          Length = 368

 Score =  259 bits (661), Expect = 2e-67
 Identities = 125/162 (77%), Positives = 146/162 (90%)
 Frame = -3

Query: 486 ELFLSNLDALQPEVCITAAYGNILPSKFLKLPSLGTINIHPSILPLYRGAAPVQRALQDG 307
           ++FLS L  L+PE+CITAAYGNILP+KFL +P+LGT+NIHPS+LPLYRGAAPVQRALQDG
Sbjct: 103 DMFLSTLKVLEPELCITAAYGNILPTKFLNIPALGTVNIHPSLLPLYRGAAPVQRALQDG 162

Query: 306 VKETGVSLVYTVRAMDAGPVIACERVEVDDHVKAPELLVLLFDQGSKLLIRELPSILDGS 127
           VKETGVSL +TVRA+DAGP+IA E+ EV++H+KAP+LL LLF +GSKLLIRELPSILDGS
Sbjct: 163 VKETGVSLAFTVRALDAGPIIASEKFEVNEHIKAPDLLALLFLEGSKLLIRELPSILDGS 222

Query: 126 ARLKAQEQDNSKATLAPKLNPEDAWLSFDQEAVVLHNKVRAF 1
           A  KAQ QD SKAT APK+ P++AWLSFDQEA VLHNKVRAF
Sbjct: 223 AEKKAQPQDESKATKAPKIAPDEAWLSFDQEAYVLHNKVRAF 264


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