BLASTX nr result
ID: Coptis24_contig00019733
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019733
(499 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA92085.1| transposon protein, putative, unclassified [Oryza... 89 1e-30
gb|EEE68621.1| hypothetical protein OsJ_27177 [Oryza sativa Japo... 84 4e-28
ref|XP_004143697.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l... 79 2e-27
ref|XP_002447845.1| hypothetical protein SORBIDRAFT_06g016820 [S... 84 2e-27
gb|AAR10861.1| putative transposase [Oryza sativa Japonica Group] 86 3e-27
>gb|ABA92085.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 677
Score = 89.4 bits (220), Expect(2) = 1e-30
Identities = 45/96 (46%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 MKAMDGKKPRTIFTDQCPSMAKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVYK-VDGF 177
+KAM GKKP+TI TD+ +MAKAI V P E + R+C+WH+ N KHL+ V K F
Sbjct: 292 LKAMSGKKPQTILTDEDAAMAKAIKLVMP--ESHHRICVWHMNQNACKHLAGVVKEYKKF 349
Query: 178 TKTLKRCIYNSETVKEFESRWNKMLEDFDLVKNDWL 285
+ CIY+ E EF + WN+ML+ +DL +N WL
Sbjct: 350 NADFQNCIYDKEEEDEFINAWNRMLKKYDLQENKWL 385
Score = 68.9 bits (167), Expect(2) = 1e-30
Identities = 30/71 (42%), Positives = 52/71 (73%)
Frame = +2
Query: 284 YKVHKKWALVYDRDTFCADMTTTQRSESINNFLKKFVKRKYNLMEFVNRYEKALAR*RHT 463
++ ++WALVY R+TF ADM+ TQRSES+NN LK ++ KY+++ F+ +++ L+ R+
Sbjct: 389 FQKKEQWALVYGRNTFSADMSGTQRSESMNNELKGYISVKYDILTFLEHFDRLLSDKRYE 448
Query: 464 ELVSDFEAVKS 496
E+ +DF+ +S
Sbjct: 449 EVKNDFKTTQS 459
>gb|EEE68621.1| hypothetical protein OsJ_27177 [Oryza sativa Japonica Group]
Length = 757
Score = 84.3 bits (207), Expect(2) = 4e-28
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +1
Query: 1 MKAMDGKKPRTIFTDQCPSMAKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVY--KVDG 174
+ AM GK P TIFTDQ +MA AIA VFP RLCLWHI+ NG K+L HV +
Sbjct: 291 LTAMSGKHPSTIFTDQDTAMAAAIALVFP--NTRHRLCLWHIYLNGGKNLGHVIHKHPNK 348
Query: 175 FTKTLKRCIYNSETVKEFESRWNKMLEDFDLVKNDWL 285
F KRC+Y + F W+++ ++ L N W+
Sbjct: 349 FLTDFKRCVYEERSEYHFNKMWHELWSEYKLEDNVWM 385
Score = 65.5 bits (158), Expect(2) = 4e-28
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +2
Query: 284 YKVHKKWALVYDRDTFCADMTTTQRSESINNFLKKFVKRKYNLMEFVNRYEKALAR*RHT 463
Y++ KKWA+V+ RD+F ADMT+TQRSE +NN KK +RK L E + +K A R
Sbjct: 389 YRLKKKWAIVF-RDSFTADMTSTQRSEGMNNVFKKRFRRKLGLSELLVECDKVAASLREN 447
Query: 464 ELVSDFEAVKS 496
EL +DF++ S
Sbjct: 448 ELDADFKSRNS 458
>ref|XP_004143697.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Cucumis sativus]
Length = 652
Score = 78.6 bits (192), Expect(2) = 2e-27
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 MKAMDGKKPRTIFTDQCPSMAKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVYK-VDGF 177
+ M K+P+TI T+Q ++AKAI VFP E RLC+WHIF + AK LSHV+ + F
Sbjct: 306 LSVMSRKQPKTILTNQSSTIAKAICDVFP--EAQHRLCVWHIFQSAAKTLSHVFHGPNQF 363
Query: 178 TKTLKRCIYNSETVKEFESRWNKMLEDFDLVKNDWL 285
+ C+++ E ++ W KML+ + L N WL
Sbjct: 364 VQDFSSCLFDYEDEDDWLLAWQKMLDKYALTNNKWL 399
Score = 68.9 bits (167), Expect(2) = 2e-27
Identities = 29/67 (43%), Positives = 50/67 (74%)
Frame = +2
Query: 284 YKVHKKWALVYDRDTFCADMTTTQRSESINNFLKKFVKRKYNLMEFVNRYEKALAR*RHT 463
+++ +KWA+VY R F ADM +TQRSE +N LKK+++ Y++++F+ +Y++ LA R
Sbjct: 403 FELREKWAIVYGRQAFTADMKSTQRSEIMNEVLKKYLRPDYDILQFLQQYDRFLADRRCE 462
Query: 464 ELVSDFE 484
E+V+DF+
Sbjct: 463 EMVADFK 469
>ref|XP_002447845.1| hypothetical protein SORBIDRAFT_06g016820 [Sorghum bicolor]
gi|241939028|gb|EES12173.1| hypothetical protein
SORBIDRAFT_06g016820 [Sorghum bicolor]
Length = 596
Score = 84.0 bits (206), Expect(2) = 2e-27
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +1
Query: 7 AMDGKKPRTIFTDQCPSMAKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVYK--VDGFT 180
AM GK P TIFTDQ +MA AIA VF + RLCLWHI+ N AKHL + + D F
Sbjct: 258 AMSGKHPNTIFTDQDAAMAGAIAYVF--RNTSHRLCLWHIYLNAAKHLGPIIQNYPDTFL 315
Query: 181 KTLKRCIYNSETVKEFESRWNKMLEDFDLVKNDWL 285
KRC+Y + F +W ++L ++L N W+
Sbjct: 316 PEFKRCVYEDRSEDLFIQKWQELLSKYNLENNQWM 350
Score = 63.5 bits (153), Expect(2) = 2e-27
Identities = 34/68 (50%), Positives = 42/68 (61%)
Frame = +2
Query: 284 YKVHKKWALVYDRDTFCADMTTTQRSESINNFLKKFVKRKYNLMEFVNRYEKALAR*RHT 463
Y + KKWA VY RD+F ADM +TQRSE +NN KK +RK L E + EK A R
Sbjct: 354 YALRKKWAAVY-RDSFTADMNSTQRSEGMNNVFKKRFRRKLGLTELLIECEKVSASLREN 412
Query: 464 ELVSDFEA 487
EL +DF +
Sbjct: 413 ELEADFNS 420
>gb|AAR10861.1| putative transposase [Oryza sativa Japonica Group]
Length = 813
Score = 85.9 bits (211), Expect(2) = 3e-27
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +1
Query: 1 MKAMDGKKPRTIFTDQCPSMAKAIAQVFPVLEINRRLCLWHIFFNGAKHLSHVY--KVDG 174
+ AM GK P TIFTDQ +MA AIA VF + RLCLWHI+ NG K+LSHV +
Sbjct: 354 LTAMSGKHPSTIFTDQDAAMAAAIAFVFR--NTSHRLCLWHIYLNGGKNLSHVIHKHPNK 411
Query: 175 FTKTLKRCIYNSETVKEFESRWNKMLEDFDLVKNDWL*GTQKM 303
F KRC+Y + F W+++L +++L N W+ K+
Sbjct: 412 FLADFKRCVYEDRSEYYFNKMWHELLSEYNLEDNKWISNLYKL 454
Score = 60.8 bits (146), Expect(2) = 3e-27
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +2
Query: 284 YKVHKKWALVYDRDTFCADMTTTQRSESINNFLKKFVKRKYNLMEFVNRYEKALAR*RHT 463
YK+ +KWA+V+ R++F AD+T+TQRSE +NN KK +RK L E + +K A R
Sbjct: 452 YKLREKWAIVF-RNSFTADITSTQRSEGMNNVYKKRFRRKLGLSELLVECDKVSATLREN 510
Query: 464 ELVSDFEA 487
EL +DF++
Sbjct: 511 ELDADFKS 518