BLASTX nr result

ID: Coptis24_contig00019729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019729
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531196.1| zinc finger protein, putative [Ricinus commu...   403   e-110
emb|CAN76714.1| hypothetical protein VITISV_018794 [Vitis vinifera]   397   e-108
ref|XP_002277264.1| PREDICTED: GDSL esterase/lipase At4g26790-li...   397   e-108
emb|CBI26692.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002528958.1| zinc finger protein, putative [Ricinus commu...   392   e-107

>ref|XP_002531196.1| zinc finger protein, putative [Ricinus communis]
            gi|223529198|gb|EEF31173.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 577

 Score =  403 bits (1035), Expect = e-110
 Identities = 188/319 (58%), Positives = 241/319 (75%)
 Frame = +3

Query: 87   VVAKVPAVIVFGDSTVDAGNNNYIPTLVKSNFEPYGRDFEGGKPTGRFCNGRLVTDFVSE 266
            V AKV A+IVFGDS+VD+GNN+YIPT++KSNF PYGRDF GGKPTGRF NGR+ TDF+SE
Sbjct: 21   VNAKVSAIIVFGDSSVDSGNNDYIPTVLKSNFAPYGRDFNGGKPTGRFSNGRIPTDFISE 80

Query: 267  AFGIKPFIPAYLDPAYGIEDFATGVSFASAGSGYDNLTSHSVSVIPMWKELDYFKNYRKR 446
            AFG+KP +PAYLDP Y I+DFA GV FASAG+GYDN TS  +SVIP+WKEL+Y+K Y+K+
Sbjct: 81   AFGLKPTVPAYLDPTYDIQDFAVGVCFASAGTGYDNATSDVLSVIPLWKELEYYKEYQKK 140

Query: 447  LISLMGMNKARQMLHEALYMISIGTNDFILNYYTQPAGRSTQYTIEEYENFLIGIAESFV 626
            L   +G  KA + L EALY++SIGTNDF+ NYY  P GRS+++++ EY+NFL+GIA  F+
Sbjct: 141  LSGYLGHEKANEHLREALYLMSIGTNDFLENYYILP-GRSSEFSVREYQNFLVGIARDFI 199

Query: 627  KEIYQLGARKVSLVGLPPIGCLPLLRTLNYRGGGACREDCNN*ARDFDXXXXXXXXXXXX 806
             E++ LGARK+S+ GLPP+GCLPL RT N   G  C E+ NN A+DF+            
Sbjct: 200  TELHLLGARKISVSGLPPMGCLPLERTTNIFFGSQCIEEYNNVAKDFNEKLNGMLIELNK 259

Query: 807  XXXXVKLLFTDVLNPALQVIENPHAYGFESVAIACCGTGTVELSYLCNGNNPFTCKDASK 986
                +KL+ ++  +   ++IENP ++GF++ A ACCGTG  E+ Y+CN  NPFTC DA+K
Sbjct: 260  NLDGIKLVLSNPYDILSKIIENPSSFGFDNAAEACCGTGLFEMGYMCNKRNPFTCSDANK 319

Query: 987  YVFWDSVHPTEKLYHIVAD 1043
            YVFWDS HPTEK   IVAD
Sbjct: 320  YVFWDSFHPTEKTNQIVAD 338


>emb|CAN76714.1| hypothetical protein VITISV_018794 [Vitis vinifera]
          Length = 344

 Score =  397 bits (1021), Expect = e-108
 Identities = 185/319 (57%), Positives = 240/319 (75%)
 Frame = +3

Query: 93   AKVPAVIVFGDSTVDAGNNNYIPTLVKSNFEPYGRDFEGGKPTGRFCNGRLVTDFVSEAF 272
            AKVPA+IVFGDS+VD+GNNN + T++KSNFEPYGRDF GG+PTGRF NGRL  DF+SEAF
Sbjct: 18   AKVPAIIVFGDSSVDSGNNNQVQTILKSNFEPYGRDFNGGQPTGRFSNGRLPPDFISEAF 77

Query: 273  GIKPFIPAYLDPAYGIEDFATGVSFASAGSGYDNLTSHSVSVIPMWKELDYFKNYRKRLI 452
            G+KP +PAYLDP Y I DFATGV FASAG+GYDN TS+ +SVIP WKEL+Y+K Y+K+L 
Sbjct: 78   GVKPVVPAYLDPTYHITDFATGVCFASAGTGYDNATSNVLSVIPFWKELEYYKEYQKQLR 137

Query: 453  SLMGMNKARQMLHEALYMISIGTNDFILNYYTQPAGRSTQYTIEEYENFLIGIAESFVKE 632
              +G  KA ++L E+LY+IS+GTNDF+ NYY  P GR  ++++EEY++FL+GIA +F+ E
Sbjct: 138  DYLGHQKANEVLSESLYLISLGTNDFLENYYLLP-GRRLKFSVEEYQSFLVGIAGNFITE 196

Query: 633  IYQLGARKVSLVGLPPIGCLPLLRTLNYRGGGACREDCNN*ARDFDXXXXXXXXXXXXXX 812
            ++QLGARK+SL GLPP+GCLPL RT N   G  C E  N  A DF+              
Sbjct: 197  LFQLGARKISLXGLPPMGCLPLERTTNILSGRDCVEKYNIVAWDFNGKLQELVXKLKNEL 256

Query: 813  XXVKLLFTDVLNPALQVIENPHAYGFESVAIACCGTGTVELSYLCNGNNPFTCKDASKYV 992
              ++L+ T+  +  L++I++PH++GFE  A+ACC TG VE+ Y+CN  NP TC DA KYV
Sbjct: 257  SGIRLVLTNPFDILLEIIQSPHSFGFEEAAVACCATGVVEMGYMCNKFNPLTCADADKYV 316

Query: 993  FWDSVHPTEKLYHIVADQL 1049
            FWD+ HPTEK   I+AD +
Sbjct: 317  FWDAFHPTEKTNRIIADHV 335


>ref|XP_002277264.1| PREDICTED: GDSL esterase/lipase At4g26790-like [Vitis vinifera]
          Length = 414

 Score =  397 bits (1019), Expect = e-108
 Identities = 184/319 (57%), Positives = 239/319 (74%)
 Frame = +3

Query: 93   AKVPAVIVFGDSTVDAGNNNYIPTLVKSNFEPYGRDFEGGKPTGRFCNGRLVTDFVSEAF 272
            AKVPA+IVFGDS+VD+GNNN + T++KSNFEPYGRDF GG+PTGRF NGRL  DF+SEAF
Sbjct: 88   AKVPAIIVFGDSSVDSGNNNQVQTILKSNFEPYGRDFNGGQPTGRFSNGRLPPDFISEAF 147

Query: 273  GIKPFIPAYLDPAYGIEDFATGVSFASAGSGYDNLTSHSVSVIPMWKELDYFKNYRKRLI 452
            G+KP +PAYLDP Y I DFATGV FASAG+GYDN TS+ +SVIP WKEL+Y+K Y+K+L 
Sbjct: 148  GVKPVVPAYLDPTYHITDFATGVCFASAGTGYDNATSNVLSVIPFWKELEYYKEYQKQLR 207

Query: 453  SLMGMNKARQMLHEALYMISIGTNDFILNYYTQPAGRSTQYTIEEYENFLIGIAESFVKE 632
              +G  KA ++L E+LY+IS+GTNDF+ NYY  P GR  ++++EEY++FL+GIA +F+ E
Sbjct: 208  DYLGHQKANEVLSESLYLISLGTNDFLENYYLLP-GRRLKFSVEEYQSFLVGIAGNFITE 266

Query: 633  IYQLGARKVSLVGLPPIGCLPLLRTLNYRGGGACREDCNN*ARDFDXXXXXXXXXXXXXX 812
            ++QLGARK+SL GLPP+GCLPL RT N   G  C E  N  A DF+              
Sbjct: 267  LFQLGARKISLGGLPPMGCLPLERTTNILSGRDCVEKYNIVAWDFNGKLQELVMKLKNEL 326

Query: 813  XXVKLLFTDVLNPALQVIENPHAYGFESVAIACCGTGTVELSYLCNGNNPFTCKDASKYV 992
              ++L+ T+  +  L++I++PH++GFE  A+ACC TG VE+ Y+CN  NP TC DA KYV
Sbjct: 327  SGIRLVLTNPFDILLEIIQSPHSFGFEEAAVACCATGVVEMGYMCNKFNPLTCADADKYV 386

Query: 993  FWDSVHPTEKLYHIVADQL 1049
            FWD+ HPTEK   I+AD +
Sbjct: 387  FWDAFHPTEKTNRIIADHV 405


>emb|CBI26692.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  397 bits (1019), Expect = e-108
 Identities = 184/319 (57%), Positives = 239/319 (74%)
 Frame = +3

Query: 93   AKVPAVIVFGDSTVDAGNNNYIPTLVKSNFEPYGRDFEGGKPTGRFCNGRLVTDFVSEAF 272
            AKVPA+IVFGDS+VD+GNNN + T++KSNFEPYGRDF GG+PTGRF NGRL  DF+SEAF
Sbjct: 18   AKVPAIIVFGDSSVDSGNNNQVQTILKSNFEPYGRDFNGGQPTGRFSNGRLPPDFISEAF 77

Query: 273  GIKPFIPAYLDPAYGIEDFATGVSFASAGSGYDNLTSHSVSVIPMWKELDYFKNYRKRLI 452
            G+KP +PAYLDP Y I DFATGV FASAG+GYDN TS+ +SVIP WKEL+Y+K Y+K+L 
Sbjct: 78   GVKPVVPAYLDPTYHITDFATGVCFASAGTGYDNATSNVLSVIPFWKELEYYKEYQKQLR 137

Query: 453  SLMGMNKARQMLHEALYMISIGTNDFILNYYTQPAGRSTQYTIEEYENFLIGIAESFVKE 632
              +G  KA ++L E+LY+IS+GTNDF+ NYY  P GR  ++++EEY++FL+GIA +F+ E
Sbjct: 138  DYLGHQKANEVLSESLYLISLGTNDFLENYYLLP-GRRLKFSVEEYQSFLVGIAGNFITE 196

Query: 633  IYQLGARKVSLVGLPPIGCLPLLRTLNYRGGGACREDCNN*ARDFDXXXXXXXXXXXXXX 812
            ++QLGARK+SL GLPP+GCLPL RT N   G  C E  N  A DF+              
Sbjct: 197  LFQLGARKISLGGLPPMGCLPLERTTNILSGRDCVEKYNIVAWDFNGKLQELVMKLKNEL 256

Query: 813  XXVKLLFTDVLNPALQVIENPHAYGFESVAIACCGTGTVELSYLCNGNNPFTCKDASKYV 992
              ++L+ T+  +  L++I++PH++GFE  A+ACC TG VE+ Y+CN  NP TC DA KYV
Sbjct: 257  SGIRLVLTNPFDILLEIIQSPHSFGFEEAAVACCATGVVEMGYMCNKFNPLTCADADKYV 316

Query: 993  FWDSVHPTEKLYHIVADQL 1049
            FWD+ HPTEK   I+AD +
Sbjct: 317  FWDAFHPTEKTNRIIADHV 335


>ref|XP_002528958.1| zinc finger protein, putative [Ricinus communis]
            gi|223531604|gb|EEF33432.1| zinc finger protein, putative
            [Ricinus communis]
          Length = 352

 Score =  392 bits (1008), Expect = e-107
 Identities = 186/342 (54%), Positives = 251/342 (73%), Gaps = 1/342 (0%)
 Frame = +3

Query: 27   IHQTLPCLLVMNMFSMFYGNVVAKVPAVIVFGDSTVDAGNNNYIPTLVKSNFEPYGRDFE 206
            +H  L   + + + S+F     AKVPAVIVFGDS+VDAGNNN I T++KSNF PYGRDFE
Sbjct: 4    MHVDLFFFITLAVLSLFAAETEAKVPAVIVFGDSSVDAGNNNAISTVLKSNFRPYGRDFE 63

Query: 207  GGKPTGRFCNGRLVTDFVSEAFGIKPFIPAYLDPAYGIEDFATGVSFASAGSGYDNLTSH 386
            GG+PTGRFCNGR+  DF+S+AFG+KP IPAYLDP + I DFATGV FASAG+GYDN TS 
Sbjct: 64   GGRPTGRFCNGRIPPDFISQAFGLKPSIPAYLDPMFSISDFATGVCFASAGTGYDNATSK 123

Query: 387  SVSVIPMWKELDYFKNYRKRLISLMGMNKARQMLHEALYMISIGTNDFILNYYTQPAGRS 566
             ++VIP+WKEL+Y+K+Y+ +L + +G ++A +++ EALY++S+GTNDF+ NYYT P  RS
Sbjct: 124  VLNVIPLWKELEYYKDYQNKLRAYIGNDRASEIISEALYLMSLGTNDFLENYYTFPTRRS 183

Query: 567  TQYTIEEYENFLIGIAESFVKEIYQLGARKVSLVGLPPIGCLPLLRTLNYRGGGACREDC 746
             Q+T+++YE+FL+ +A +F+ E+Y LGARK+SL G+PP+GCLPL RT N+ G   C E+ 
Sbjct: 184  -QFTVKQYEDFLVRLAGNFISELYSLGARKISLTGVPPMGCLPLERTTNFLGHNDCLEEY 242

Query: 747  NN*ARDFDXXXXXXXXXXXXXXXXVKLLFT-DVLNPALQVIENPHAYGFESVAIACCGTG 923
            NN A +F+                +KL+FT +V +    +I  P  YGFE   +ACC TG
Sbjct: 243  NNVALEFNGKLEGIAAQLNKGLPGLKLVFTKNVYDIFYDIIRRPSLYGFEVTGVACCATG 302

Query: 924  TVELSYLCNGNNPFTCKDASKYVFWDSVHPTEKLYHIVADQL 1049
            T E+SYLCN  + FTC DA++YVFWD+ HPTEK   I++DQ+
Sbjct: 303  TFEMSYLCN-EHSFTCPDANRYVFWDAFHPTEKTNQIISDQV 343


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