BLASTX nr result
ID: Coptis24_contig00019718
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019718
(984 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002312645.1| multidrug resistance protein ABC transporter... 287 3e-75
ref|XP_002315633.1| multidrug resistance protein ABC transporter... 276 4e-72
ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 274 3e-71
ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3... 274 3e-71
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6... 272 8e-71
>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
resistance protein ABC transporter family [Populus
trichocarpa]
Length = 1361
Score = 287 bits (734), Expect = 3e-75
Identities = 142/204 (69%), Positives = 169/204 (82%)
Frame = +1
Query: 373 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 552
LFW SPTLVSVVTFGVC+L++TPLT+GTVLSALATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 389 LFWASPTLVSVVTFGVCILLKTPLTTGTVLSALATFRILQEPIYNLPELISMIAQTKVSI 448
Query: 553 DRINDFIREENQEYLTLDYAPNTSSVSIEIASGEFSWETGNAKGNKPTIKIAKDLKIMKG 732
DRI DF+ E++Q+ A S ++IE+ GE++WET + KPTIKI K++KIMKG
Sbjct: 449 DRIQDFLSEDDQKKQIPYQASQASDITIEMKCGEYAWETIDQNSTKPTIKITKNMKIMKG 508
Query: 733 SKIAVSGMVGSGKSSFLCSILGEIPWISGMGVKVYWSKAYVPQSAWIQTSTVRENVLFGK 912
K+AV G VGSGKSS LCSILGEIP ISG GVKV+ +KAYVPQSAWIQT TVR+NVLFGK
Sbjct: 509 YKVAVCGSVGSGKSSLLCSILGEIPMISGAGVKVHGTKAYVPQSAWIQTGTVRDNVLFGK 568
Query: 913 EMKKCYYKDVLKACALNRDIDMWA 984
+M K Y+DVL+ CALN+DI++WA
Sbjct: 569 DMSKEIYEDVLEGCALNQDIEIWA 592
Score = 80.1 bits (196), Expect = 8e-13
Identities = 35/48 (72%), Positives = 44/48 (91%)
Frame = -3
Query: 145 KEEVTETGRMKWQVYSTFVSSAYKGSLITVILLCQVLFQLL*IGSNYW 2
+EEV+ETGR+KW VYSTF++SAYKG+L+ +ILLCQVLFQ L +GSNYW
Sbjct: 779 QEEVSETGRVKWSVYSTFITSAYKGALVPIILLCQVLFQGLQMGSNYW 826
>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
resistance protein ABC transporter family [Populus
trichocarpa]
Length = 1044
Score = 276 bits (707), Expect = 4e-72
Identities = 136/204 (66%), Positives = 166/204 (81%)
Frame = +1
Query: 373 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 552
LFW SPTLVSVVTFGVC++++TPLT+GTVLSALATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 128 LFWASPTLVSVVTFGVCIILKTPLTTGTVLSALATFRILQEPIYNLPELISMIAQTKVSI 187
Query: 553 DRINDFIREENQEYLTLDYAPNTSSVSIEIASGEFSWETGNAKGNKPTIKIAKDLKIMKG 732
DRI DF+RE++Q+ S ++IE+ SGE++WET + K TIKI K++KIMK
Sbjct: 188 DRIQDFLREKDQKKQIPYQTSQASDIAIEMKSGEYAWETKDQISTKTTIKITKNMKIMKL 247
Query: 733 SKIAVSGMVGSGKSSFLCSILGEIPWISGMGVKVYWSKAYVPQSAWIQTSTVRENVLFGK 912
K+AV G VGSGKSS LCSI+GEIP ISG G+KV+ +KAYVPQ AWIQT TVR+NVLFGK
Sbjct: 248 YKVAVCGSVGSGKSSLLCSIIGEIPRISGAGIKVHGTKAYVPQRAWIQTRTVRDNVLFGK 307
Query: 913 EMKKCYYKDVLKACALNRDIDMWA 984
+M + +Y+DVLK CAL +DI+ WA
Sbjct: 308 DMNRDFYEDVLKGCALKQDIEQWA 331
Score = 80.9 bits (198), Expect = 4e-13
Identities = 35/51 (68%), Positives = 45/51 (88%)
Frame = -3
Query: 154 DNNKEEVTETGRMKWQVYSTFVSSAYKGSLITVILLCQVLFQLL*IGSNYW 2
+ +EEV+ETGR+KW VYSTF++SAYKG+L+ +ILLCQVLFQ L +GSNYW
Sbjct: 472 ERTQEEVSETGRVKWSVYSTFITSAYKGALVPIILLCQVLFQGLQMGSNYW 522
>ref|XP_004169512.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter C family member
3-like [Cucumis sativus]
Length = 1444
Score = 274 bits (700), Expect = 3e-71
Identities = 136/203 (66%), Positives = 164/203 (80%)
Frame = +1
Query: 373 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 552
LFW+SPTLVSV TFG CV+++ PLT+GTVLSA+ATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 479 LFWVSPTLVSVFTFGACVMMKVPLTAGTVLSAIATFRILQEPIYNLPELISMIAQTKVSL 538
Query: 553 DRINDFIREENQEYLTLDYAPNTSSVSIEIASGEFSWETGNAKGNKPTIKIAKDLKIMKG 732
DRI +FIREE+Q N S V+IE+ GE+SWE + KPTIK+A+ ++I KG
Sbjct: 539 DRIQEFIREEDQRKRIYYPPSNPSDVAIEMEVGEYSWEASDQNFKKPTIKVAEKMQIPKG 598
Query: 733 SKIAVSGMVGSGKSSFLCSILGEIPWISGMGVKVYWSKAYVPQSAWIQTSTVRENVLFGK 912
K+AV G VGSGKSS LCSILGEIP +SG +KV+ SKAYVPQSAWIQ+ TVRENVLFGK
Sbjct: 599 YKVAVCGSVGSGKSSLLCSILGEIPQVSGTQMKVHGSKAYVPQSAWIQSGTVRENVLFGK 658
Query: 913 EMKKCYYKDVLKACALNRDIDMW 981
E+ K +Y+DVL+ACALN+DI +W
Sbjct: 659 EIDKHFYEDVLEACALNQDIKLW 681
Score = 78.2 bits (191), Expect = 3e-12
Identities = 33/48 (68%), Positives = 43/48 (89%)
Frame = -3
Query: 145 KEEVTETGRMKWQVYSTFVSSAYKGSLITVILLCQVLFQLL*IGSNYW 2
+EE +TGR+KW VYSTF++SAYKG+L+ +ILLCQVLFQ+L +GSNYW
Sbjct: 843 QEEEIQTGRVKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYW 890
>ref|XP_004135511.1| PREDICTED: ABC transporter C family member 3-like [Cucumis sativus]
Length = 1444
Score = 274 bits (700), Expect = 3e-71
Identities = 136/203 (66%), Positives = 164/203 (80%)
Frame = +1
Query: 373 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 552
LFW+SPTLVSV TFG CV+++ PLT+GTVLSA+ATFRILQEPIYNLPELIS IAQ KVS+
Sbjct: 479 LFWVSPTLVSVFTFGACVMMKVPLTAGTVLSAIATFRILQEPIYNLPELISMIAQTKVSL 538
Query: 553 DRINDFIREENQEYLTLDYAPNTSSVSIEIASGEFSWETGNAKGNKPTIKIAKDLKIMKG 732
DRI +FIREE+Q N S V+IE+ GE+SWE + KPTIK+A+ ++I KG
Sbjct: 539 DRIQEFIREEDQRKRIYYPPSNPSDVAIEMEVGEYSWEASDQNFKKPTIKVAEKMQIPKG 598
Query: 733 SKIAVSGMVGSGKSSFLCSILGEIPWISGMGVKVYWSKAYVPQSAWIQTSTVRENVLFGK 912
K+AV G VGSGKSS LCSILGEIP +SG +KV+ SKAYVPQSAWIQ+ TVRENVLFGK
Sbjct: 599 YKVAVCGSVGSGKSSLLCSILGEIPQVSGTQMKVHGSKAYVPQSAWIQSGTVRENVLFGK 658
Query: 913 EMKKCYYKDVLKACALNRDIDMW 981
E+ K +Y+DVL+ACALN+DI +W
Sbjct: 659 EIDKHFYEDVLEACALNQDIKLW 681
Score = 78.2 bits (191), Expect = 3e-12
Identities = 33/48 (68%), Positives = 43/48 (89%)
Frame = -3
Query: 145 KEEVTETGRMKWQVYSTFVSSAYKGSLITVILLCQVLFQLL*IGSNYW 2
+EE +TGR+KW VYSTF++SAYKG+L+ +ILLCQVLFQ+L +GSNYW
Sbjct: 843 QEEEIQTGRVKWSVYSTFITSAYKGALVPIILLCQVLFQILQMGSNYW 890
>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
abc-transoprter, putative [Ricinus communis]
gi|223546054|gb|EEF47557.1| multidrug
resistance-associated protein 2, 6 (mrp2, 6),
abc-transoprter, putative [Ricinus communis]
Length = 1464
Score = 272 bits (696), Expect = 8e-71
Identities = 135/203 (66%), Positives = 161/203 (79%)
Frame = +1
Query: 373 LFWISPTLVSVVTFGVCVLVRTPLTSGTVLSALATFRILQEPIYNLPELISAIAQMKVSV 552
LFW SPTLVSV+TFGVC+L++ PLT+GTVLSALATFRILQEPIYNLPELIS IAQ KVSV
Sbjct: 511 LFWASPTLVSVITFGVCILLKIPLTTGTVLSALATFRILQEPIYNLPELISMIAQTKVSV 570
Query: 553 DRINDFIREENQEYLTLDYAPNTSSVSIEIASGEFSWETGNAKGNKPTIKIAKDLKIMKG 732
RI +FI++E Q + S ++IEI +GE++WE + KP IKI + LKIMKG
Sbjct: 571 YRIQEFIKDEGQRKQISYHNSQASDIAIEIETGEYAWERSDRDIRKPIIKITEKLKIMKG 630
Query: 733 SKIAVSGMVGSGKSSFLCSILGEIPWISGMGVKVYWSKAYVPQSAWIQTSTVRENVLFGK 912
K+AV G VGSGKSS LCSILGEIP ISG G+KVY KAYVPQSAWIQT V+ENVLFGK
Sbjct: 631 YKVAVCGSVGSGKSSLLCSILGEIPRISGAGIKVYGKKAYVPQSAWIQTGIVKENVLFGK 690
Query: 913 EMKKCYYKDVLKACALNRDIDMW 981
+M K +Y+DV++ CALN+DI +W
Sbjct: 691 DMDKAFYEDVMEGCALNQDIRIW 713
Score = 79.3 bits (194), Expect = 1e-12
Identities = 36/51 (70%), Positives = 43/51 (84%)
Frame = -3
Query: 154 DNNKEEVTETGRMKWQVYSTFVSSAYKGSLITVILLCQVLFQLL*IGSNYW 2
+ +EE TETGR+KW VYSTFV+SAYKG+L+ VILLCQV FQ L +GSNYW
Sbjct: 872 EGTQEEETETGRVKWSVYSTFVTSAYKGALVPVILLCQVFFQGLQMGSNYW 922