BLASTX nr result

ID: Coptis24_contig00019711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019711
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17102.3| unnamed protein product [Vitis vinifera]              116   5e-24
ref|XP_002527429.1| conserved hypothetical protein [Ricinus comm...   102   9e-20
ref|XP_003550607.1| PREDICTED: uncharacterized protein LOC100795...   102   1e-19
dbj|BAF36360.1| hypothetical protein [Ipomoea trifida]                100   4e-19
ref|XP_004160100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   100   5e-19

>emb|CBI17102.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  116 bits (291), Expect = 5e-24
 Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 1/142 (0%)
 Frame = -3

Query: 786 APEISXXXXXXXXXXXLFPSVSNDLEARSALWSVLGRVLVWVEEDKMSPLNLHQYIAVLV 607
           A EIS           +FP  S+D EARSALWS++ R+LV VEE ++S  +L QY++VLV
Sbjct: 388 ASEISQDLPFLEGLLDIFPFASDDPEARSALWSIMARLLVQVEESEISSSSLQQYVSVLV 447

Query: 606 GKLDVIEEDLIDHHVEDSNEDHESLNSSLTKAIARPSLSR-ISSILKQWTAIRGSTAQKD 430
            K D+IE+DL+DH + DSNE++ S  +S  K  AR +  R I +IL QWT  +    + +
Sbjct: 448 SKSDLIEDDLLDHQLHDSNENNVSSITSAAKQNARTTALRGIFNILNQWTTSKDCDMKNN 507

Query: 429 SVSEDSADDENIDKLLRCCQKY 364
            +  D  + EN+++LL CC+KY
Sbjct: 508 LMGADHDNGENVERLLNCCRKY 529


>ref|XP_002527429.1| conserved hypothetical protein [Ricinus communis]
           gi|223533164|gb|EEF34921.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 596

 Score =  102 bits (254), Expect = 9e-20
 Identities = 56/143 (39%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
 Frame = -3

Query: 786 APEISXXXXXXXXXXXLFPSVSNDLEARSALWSVLGRVLVWVEEDKMSPLNLHQYIAVLV 607
           A E+S           +F   S+D EARSALWS++ ++LV V+E +M   +LHQY+ VLV
Sbjct: 401 ASEVSYDLTFLQGLFDIFALASDDFEARSALWSIIAKLLVRVKESEMGLSSLHQYVLVLV 460

Query: 606 GKLDVIEEDLIDHHVEDSNEDHESLNSSLTKAIAR-PSLSRISSILKQWTAIRGSTAQKD 430
            K ++IE++L+D  ++ SNE+  S  SS  K+ AR  +L RI  IL QW A+R    + D
Sbjct: 461 SKAELIEDNLLDQQLDSSNEESRSSTSSHAKSNARNTALQRIVGILNQWIALRDCQEEGD 520

Query: 429 SVSEDSADDENIDKLLRCCQKYI 361
            + E +  D ++ +L+  C K+I
Sbjct: 521 RMDEPNDIDLSVCRLMDSCSKHI 543


>ref|XP_003550607.1| PREDICTED: uncharacterized protein LOC100795265 [Glycine max]
          Length = 522

 Score =  102 bits (253), Expect = 1e-19
 Identities = 56/126 (44%), Positives = 85/126 (67%), Gaps = 1/126 (0%)
 Frame = -3

Query: 735 FPSVSNDLEARSALWSVLGRVLVWVEEDKMSPLNLHQYIAVLVGKLDVIEEDLIDHHVED 556
           FP  S+D+EAR+ALW+V+ R+LV + E +MSP ++H Y++VLV KLD+IE++L++  VE 
Sbjct: 398 FPFASDDVEARNALWNVIARILVRIRETEMSPSSVHHYVSVLVRKLDLIEDELLNQQVE- 456

Query: 555 SNEDHESLNSSLTKAIAR-PSLSRISSILKQWTAIRGSTAQKDSVSEDSADDENIDKLLR 379
           S  + ESL+   + A AR  SL RI SIL QWTA +   A+ +  +E    + +  +LL 
Sbjct: 457 SGHEQESLSYPGSTANARDTSLGRIISILNQWTAEK-ENAKNNGNAEVPVSETDAKRLLD 515

Query: 378 CCQKYI 361
           CC K++
Sbjct: 516 CCHKFL 521


>dbj|BAF36360.1| hypothetical protein [Ipomoea trifida]
          Length = 611

 Score =  100 bits (249), Expect = 4e-19
 Identities = 55/130 (42%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
 Frame = -3

Query: 735 FPSVSNDLEARSALWSVLGRVLVWVEEDKMSPLNLHQYIAVLVGKLDVIEEDLIDHHVED 556
           FP  S D EARSALWS++ R+L+ V+E ++SPL LHQY++V+  + +VIEE+L+DH   D
Sbjct: 420 FPFASADAEARSALWSIIARLLIQVQEIELSPLQLHQYVSVITSETEVIEEELLDHQSND 479

Query: 555 SNEDHESLNSSLTKAIARP-----SLSRISSILKQWTAIRGSTAQKDSVSEDSADDENID 391
           SNE+  S +++L K  AR       L+ I  IL QW  +     +   + E   +  +  
Sbjct: 480 SNEECGS-SATLAKLAARNVAVSLQLNGIVRILSQWMDLEDRVKESLRMGEYHVNKGDAY 538

Query: 390 KLLRCCQKYI 361
           KLL CC KYI
Sbjct: 539 KLLHCCGKYI 548


>ref|XP_004160100.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101215373
           [Cucumis sativus]
          Length = 544

 Score =  100 bits (248), Expect = 5e-19
 Identities = 52/125 (41%), Positives = 82/125 (65%), Gaps = 1/125 (0%)
 Frame = -3

Query: 735 FPSVSNDLEARSALWSVLGRVLVWVEEDKMSPLNLHQYIAVLVGKLDVIEEDLIDHHVED 556
           F  V +D EAR A+WS++ R+LV V+E+ MS   L +Y+++LV K D+IE+DL+DH + +
Sbjct: 410 FSFVGDDFEARDAVWSIIARILVRVQENVMSRPKLFEYVSLLVSKTDLIEDDLLDHCMTE 469

Query: 555 SNEDHESLNSSLTKAIAR-PSLSRISSILKQWTAIRGSTAQKDSVSEDSADDENIDKLLR 379
           SN++ + + S+ TK+ +R  SL RI SIL  WTA +      D   E   +D ++++LL 
Sbjct: 470 SNKEEDGMTSACTKSNSRCISLRRIISILNHWTASKDEGT--DVRDEYCLEDVDVNRLLT 527

Query: 378 CCQKY 364
           CC K+
Sbjct: 528 CCSKH 532


Top