BLASTX nr result

ID: Coptis24_contig00019705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019705
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63485.1| hypothetical protein VITISV_017086 [Vitis vinifera]    79   3e-13
ref|XP_002281981.1| PREDICTED: uncharacterized protein LOC100253...    79   4e-13
emb|CBI19571.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002282303.1| PREDICTED: uncharacterized protein LOC100243...    76   3e-12
ref|XP_002521862.1| conserved hypothetical protein [Ricinus comm...    68   9e-10

>emb|CAN63485.1| hypothetical protein VITISV_017086 [Vitis vinifera]
          Length = 366

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/81 (54%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
 Frame = -3

Query: 230 APSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXXXXXXXXXXXXXXSVIPYDWEEK 51
           APSSP+RFG ++FSAPTSPSR S FYR+FN+F+F                SVIP+DWEEK
Sbjct: 27  APSSPQRFG-NFFSAPTSPSRASAFYREFNDFNF------SGRDSSASAASVIPFDWEEK 79

Query: 50  PGTPK-----GNNTERNEDDD 3
           PG PK       +T R+EDDD
Sbjct: 80  PGIPKVKTAATRSTTRDEDDD 100


>ref|XP_002281981.1| PREDICTED: uncharacterized protein LOC100253812 [Vitis vinifera]
          Length = 365

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/81 (54%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
 Frame = -3

Query: 230 APSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXXXXXXXXXXXXXXSVIPYDWEEK 51
           APSSP+RFG  +FSAPTSPSR S FYR+FN+F+F                SVIP+DWEEK
Sbjct: 27  APSSPQRFGS-FFSAPTSPSRASAFYREFNDFNF------SGRDSSASAASVIPFDWEEK 79

Query: 50  PGTPK-----GNNTERNEDDD 3
           PG PK       +T R+EDDD
Sbjct: 80  PGIPKVKTAATRSTTRDEDDD 100


>emb|CBI19571.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = -3

Query: 227 PSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXXXXXXXXXXXXXXSVIPYDWEEKP 48
           PS+PKR G +YFSAPTSPSR+S  YRDF++FS                   +P+DWEEKP
Sbjct: 88  PSTPKRLGSYYFSAPTSPSRLSEIYRDFDHFSSTKSNGSPPR---------VPFDWEEKP 138

Query: 47  GTPKGNN--TERNEDDD 3
           GTPK ++     N+DDD
Sbjct: 139 GTPKSSSKVVTANKDDD 155


>ref|XP_002282303.1| PREDICTED: uncharacterized protein LOC100243808 [Vitis vinifera]
          Length = 357

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/77 (49%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = -3

Query: 227 PSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXXXXXXXXXXXXXXSVIPYDWEEKP 48
           PS+PKR G +YFSAPTSPSR+S  YRDF++FS                   +P+DWEEKP
Sbjct: 28  PSTPKRLGSYYFSAPTSPSRLSEIYRDFDHFSSTKSNGSPPR---------VPFDWEEKP 78

Query: 47  GTPKGNN--TERNEDDD 3
           GTPK ++     N+DDD
Sbjct: 79  GTPKSSSKVVTANKDDD 95


>ref|XP_002521862.1| conserved hypothetical protein [Ricinus communis]
           gi|223538900|gb|EEF40498.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 382

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/76 (43%), Positives = 43/76 (56%)
 Frame = -3

Query: 230 APSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXXXXXXXXXXXXXXSVIPYDWEEK 51
           APSSP+RFG  + SAPTSP+R S F+R+ N+ S                   IP+DWEEK
Sbjct: 29  APSSPQRFGNFFSSAPTSPTRSSSFFRELNDVSLATNSSS------------IPFDWEEK 76

Query: 50  PGTPKGNNTERNEDDD 3
           PGTPK      ++ +D
Sbjct: 77  PGTPKARKNTNHDSED 92


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