BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019691
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004940538.1| psbH gene product (chloroplast) [Boea hygrom...   142   3e-32
gb|AAZ04054.1| photosystem II phosphoprotein [Ranunculus macrant...   142   4e-32
gb|AFB70616.1| photosystem II reaction center protein H, partial...   141   5e-32
ref|YP_004465216.1| photosystem II phosphoprotein [Jacobaea vulg...   141   5e-32
gb|ADM92704.1| photosystem II phosphoprotein [Franklinia alatamaha]   141   5e-32

>ref|YP_004940538.1| psbH gene product (chloroplast) [Boea hygrometrica]
           gi|291059281|gb|ADD72117.1| photosystem II
           phosphoprotein [Olea europaea]
           gi|340549436|gb|AEK53258.1| photosystem II
           phosphoprotein (chloroplast) [Boea hygrometrica]
          Length = 79

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/78 (92%), Positives = 73/78 (93%)
 Frame = +3

Query: 84  NAIGFMATQTVEGSSRSRPRRTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLA 263
           N IGFMATQTVE SSRS PRRT  GSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL+
Sbjct: 2   NTIGFMATQTVENSSRSGPRRTTVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLS 61

Query: 264 IILEIYNSSVLLDGISMN 317
           IILEIYNSSVLLDGISMN
Sbjct: 62  IILEIYNSSVLLDGISMN 79


>gb|AAZ04054.1| photosystem II phosphoprotein [Ranunculus macranthus]
          Length = 78

 Score =  142 bits (357), Expect = 4e-32
 Identities = 71/78 (91%), Positives = 74/78 (94%)
 Frame = +3

Query: 84  NAIGFMATQTVEGSSRSRPRRTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLA 263
           NAIGFMATQT+EGSS+S PR T  GSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL+
Sbjct: 1   NAIGFMATQTIEGSSKSGPRGTTVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLS 60

Query: 264 IILEIYNSSVLLDGISMN 317
           IILEIYNSSVLLDGISMN
Sbjct: 61  IILEIYNSSVLLDGISMN 78


>gb|AFB70616.1| photosystem II reaction center protein H, partial (chloroplast)
           [Mollugo verticillata]
          Length = 79

 Score =  141 bits (356), Expect = 5e-32
 Identities = 70/78 (89%), Positives = 73/78 (93%)
 Frame = +3

Query: 84  NAIGFMATQTVEGSSRSRPRRTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLA 263
           N IGFMATQTVEGSSRSRP+ T  G+LLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FL 
Sbjct: 2   NTIGFMATQTVEGSSRSRPKPTTVGALLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLC 61

Query: 264 IILEIYNSSVLLDGISMN 317
           IILEIYNSSVLLDGISMN
Sbjct: 62  IILEIYNSSVLLDGISMN 79


>ref|YP_004465216.1| photosystem II phosphoprotein [Jacobaea vulgaris]
           gi|308156111|gb|ADO15439.1| photosystem II
           phosphoprotein [Jacobaea vulgaris]
          Length = 79

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/78 (91%), Positives = 72/78 (92%)
 Frame = +3

Query: 84  NAIGFMATQTVEGSSRSRPRRTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLA 263
           N IGFMATQTVE  SRS PRRT  GSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFL+
Sbjct: 2   NKIGFMATQTVENGSRSAPRRTNVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLS 61

Query: 264 IILEIYNSSVLLDGISMN 317
           IILEIYNSSVLLDGISMN
Sbjct: 62  IILEIYNSSVLLDGISMN 79


>gb|ADM92704.1| photosystem II phosphoprotein [Franklinia alatamaha]
          Length = 79

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/78 (91%), Positives = 73/78 (93%)
 Frame = +3

Query: 84  NAIGFMATQTVEGSSRSRPRRTGAGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAVFLA 263
           N IGFMATQTVE SSRS PRRT  GSLLKPLNSEYGKVAPGWGTTPLMGVAMALFA+FL+
Sbjct: 2   NIIGFMATQTVENSSRSGPRRTTVGSLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLS 61

Query: 264 IILEIYNSSVLLDGISMN 317
           IILEIYNSSVLLDGISMN
Sbjct: 62  IILEIYNSSVLLDGISMN 79