BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019683
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis...   100   5e-29
ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi...    96   3e-28
emb|CAN64562.1| hypothetical protein VITISV_038233 [Vitis vinifera]    96   3e-28
ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG3...    98   1e-27
gb|AFW62152.1| tRNA modification GTPase trmE [Zea mays]                98   1e-27

>ref|XP_002513878.1| gtpase mss1/trme, putative [Ricinus communis]
           gi|223546964|gb|EEF48461.1| gtpase mss1/trme, putative
           [Ricinus communis]
          Length = 557

 Score = 99.8 bits (247), Expect(2) = 5e-29
 Identities = 52/79 (65%), Positives = 63/79 (79%)
 Frame = -1

Query: 373 LLDTAGIWETEDIVEKIGVERSEAIAIGADVIIMAVSAMDG*TSDDAELLERIEVNQEIT 194
           LLDTAGI ET+DIVEKIGVERSEA+A+GADVII+ +SA DG TS+D+ELL RIE N++  
Sbjct: 362 LLDTAGIRETDDIVEKIGVERSEAVAMGADVIILTISAFDGWTSEDSELLSRIESNKKSV 421

Query: 193 GSSALTILVINKIHCTCSI 137
           GSS   +L INKI    S+
Sbjct: 422 GSSTPVVLAINKIDTAPSL 440



 Score = 53.1 bits (126), Expect(2) = 5e-29
 Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
 Frame = -2

Query: 144 APSESVETLKR---VVNKHVLTCAVNGQGIPDVESALVEIAGLDRIPAGRR 1
           APS S+E + R     +KHV TCAV GQGI ++E A+ EI GL+RIP G R
Sbjct: 437 APSLSMEWIGRYSKAFSKHVFTCAVTGQGIKELEMAISEIVGLNRIPTGGR 487


>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
           gi|302141924|emb|CBI19127.3| unnamed protein product
           [Vitis vinifera]
          Length = 571

 Score = 95.5 bits (236), Expect(2) = 3e-28
 Identities = 51/78 (65%), Positives = 59/78 (75%)
 Frame = -1

Query: 373 LLDTAGIWETEDIVEKIGVERSEAIAIGADVIIMAVSAMDG*TSDDAELLERIEVNQEIT 194
           LLDTAGI ET+DIVEKIGVERSEA+AI ADVIIM +SA+DG TS D +L  RI  N++  
Sbjct: 377 LLDTAGIRETDDIVEKIGVERSEAVAISADVIIMTISALDGWTSQDTKLFNRIISNKKFV 436

Query: 193 GSSALTILVINKIHCTCS 140
            SS   ILV+NKI C  S
Sbjct: 437 ESSTPVILVVNKIDCAPS 454



 Score = 54.7 bits (130), Expect(2) = 3e-28
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 105 NKHVLTCAVNGQGIPDVESALVEIAGLDRIPAGRR 1
           +KH+ TCAV GQGI D+ESA++EI GL++IPAG R
Sbjct: 467 SKHIFTCAVTGQGISDLESAIIEIVGLNKIPAGGR 501


>emb|CAN64562.1| hypothetical protein VITISV_038233 [Vitis vinifera]
          Length = 434

 Score = 95.5 bits (236), Expect(2) = 3e-28
 Identities = 51/78 (65%), Positives = 59/78 (75%)
 Frame = -1

Query: 373 LLDTAGIWETEDIVEKIGVERSEAIAIGADVIIMAVSAMDG*TSDDAELLERIEVNQEIT 194
           LLDTAGI ET+DIVEKIGVERSEA+AI ADVIIM +SA+DG TS D +L  RI  N++  
Sbjct: 214 LLDTAGIRETDDIVEKIGVERSEAVAISADVIIMTISALDGWTSQDTKLFNRIISNKKFV 273

Query: 193 GSSALTILVINKIHCTCS 140
            SS   ILV+NKI C  S
Sbjct: 274 ESSTPVILVVNKIDCAPS 291



 Score = 54.7 bits (130), Expect(2) = 3e-28
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = -2

Query: 105 NKHVLTCAVNGQGIPDVESALVEIAGLDRIPAGRR 1
           +KH+ TCAV GQGI D+ESA++EI GL++IPAG R
Sbjct: 304 SKHIFTCAVTGQGISDLESAIIEIVGLNKIPAGGR 338


>ref|NP_001149416.1| LOC100283042 [Zea mays] gi|195627080|gb|ACG35370.1| tRNA
           modification GTPase trmE [Zea mays]
          Length = 546

 Score = 97.8 bits (242), Expect(2) = 1e-27
 Identities = 46/75 (61%), Positives = 63/75 (84%)
 Frame = -1

Query: 373 LLDTAGIWETEDIVEKIGVERSEAIAIGADVIIMAVSAMDG*TSDDAELLERIEVNQEIT 194
           LLDTAGI ET+D+VEKIGV+RSEA A+GAD+I+MA+SA+DG T DD +L+E + VN++ +
Sbjct: 351 LLDTAGIRETDDVVEKIGVKRSEAAAMGADLIVMAISAVDGWTDDDTKLMEHVSVNRKSS 410

Query: 193 GSSALTILVINKIHC 149
           GS+   +LVINK+ C
Sbjct: 411 GSAVPMVLVINKVDC 425



 Score = 50.1 bits (118), Expect(2) = 1e-27
 Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = -2

Query: 141 PSESVETLKRVVNKHVLTCAVNGQGIPDVESALVEIAGLDRIPA-GRR 1
           P E  +    +  KHV TCAV G+GI D+ESA++E+ G++ +P+ GRR
Sbjct: 430 PGEQFKQFSGLFRKHVQTCAVTGKGISDLESAVIEVRGIEHVPSEGRR 477


>gb|AFW62152.1| tRNA modification GTPase trmE [Zea mays]
          Length = 545

 Score = 97.8 bits (242), Expect(2) = 1e-27
 Identities = 46/75 (61%), Positives = 63/75 (84%)
 Frame = -1

Query: 373 LLDTAGIWETEDIVEKIGVERSEAIAIGADVIIMAVSAMDG*TSDDAELLERIEVNQEIT 194
           LLDTAGI ET+D+VEKIGV+RSEA A+GAD+I+MA+SA+DG T DD +L+E + VN++ +
Sbjct: 350 LLDTAGIRETDDVVEKIGVKRSEAAAMGADLIVMAISAVDGWTDDDTKLMEHVSVNRKSS 409

Query: 193 GSSALTILVINKIHC 149
           GS+   +LVINK+ C
Sbjct: 410 GSAVPMVLVINKVDC 424



 Score = 50.1 bits (118), Expect(2) = 1e-27
 Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
 Frame = -2

Query: 141 PSESVETLKRVVNKHVLTCAVNGQGIPDVESALVEIAGLDRIPA-GRR 1
           P E  +    +  KHV TCAV G+GI D+ESA++E+ G++ +P+ GRR
Sbjct: 429 PGEQFKQFSGLFRKHVQTCAVTGKGISDLESAVIEVRGIEHVPSEGRR 476