BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019680
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [S...   143   2e-32
ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cuc...   142   2e-32
ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protei...   137   1e-30

>ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
           gi|241919651|gb|EER92795.1| hypothetical protein
           SORBIDRAFT_01g045970 [Sorghum bicolor]
          Length = 531

 Score =  143 bits (360), Expect = 2e-32
 Identities = 70/165 (42%), Positives = 108/165 (65%)
 Frame = -2

Query: 532 PCILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMV 353
           P +L+ACAA+ ++  G Q+HA +VK+ G   + FV N+L+ M+  C    AA  +F    
Sbjct: 118 PFVLRACAAMGASETGAQVHAHVVKA-GCESDAFVRNALIGMHATCGDLGAAAALFDGEA 176

Query: 352 EPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAYAKSGDIENARKLFKE 173
             D+ +W+ M+SG    G++ AA +LF+E P +D+VSWN M++AYAK GD+  AR+LF  
Sbjct: 177 REDAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDG 236

Query: 172 MPNRNVVSWNALLAGLSQNGQYDEALSVFSQMLTSGIKPDNATIL 38
            P+R+VVSWNA+++G  + G + +A+ +F QM   G KPD  T+L
Sbjct: 237 APDRDVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTML 281



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/139 (29%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
 Frame = -2

Query: 424 NSLLDMYFKCRRDEAAMLVFQQMV----EPDSTSWNIMVSGLLSAGNLEAAGKLFNEMPH 257
           N+++  Y +C   + AM +F+QM     +PD+ +   ++S    +G+++A  +L   +  
Sbjct: 246 NAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLHRFLSG 305

Query: 256 R------DVVSWNTMVSAYAKSGDIENARKLFKEMPNRNVVSWNALLAGLSQNGQYDEAL 95
           R        V  N ++  YAK G + +A ++F  M ++NV +WN+++ GL+ +G   EA+
Sbjct: 306 RFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGHVTEAI 365

Query: 94  SVFSQMLTSGIKPDNATIL 38
            VF +ML   +KPD  T +
Sbjct: 366 DVFQKMLQGNVKPDEITFV 384


>ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/164 (42%), Positives = 110/164 (67%), Gaps = 1/164 (0%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           +LKACA +     GQ++H  + K  G   N+FV NSL+D+YFK   +  A  +F +MV  
Sbjct: 133 VLKACAGLAQVLEGQKVHCFVTKY-GCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVR 191

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAYAKSGDIENARKLFKEMP 167
           D  SWN ++SG   +G ++ A  +F+ M  +++VSW+TM+S YA+ G++E AR+LF+ MP
Sbjct: 192 DVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMP 251

Query: 166 NRNVVSWNALLAGLSQNGQYDEALSVFSQML-TSGIKPDNATIL 38
            RNVVSWNA++AG +QN +Y +A+ +F QM    G+ P++ T++
Sbjct: 252 MRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLV 295



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           +L ACA + +  LG+ IH  + ++K +   +F+ N+L DMY KC     A  VF +M E 
Sbjct: 297 VLSACAHLGALDLGKWIHRFIRRNK-IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER 355

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDV----VSWNTMVSAYAKSGDIENARKLF 179
           D  SW+I++ GL   G    A   F EM    +    +S+  +++A   +G ++   + F
Sbjct: 356 DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYF 415

Query: 178 KEMP-----NRNVVSWNALLAGLSQNGQYDEALSVFSQM 77
             MP        +  +  ++  LS+ G+ D+A S+ + M
Sbjct: 416 DMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSM 454


>ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 697

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/162 (40%), Positives = 103/162 (63%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           ++KAC  + +  LGQ +H  + K KG   ++FV  +L+D Y K      A  VF +M E 
Sbjct: 241 LVKACTFMCAVELGQMVHCHIWK-KGFESHLFVQTALVDFYSKLEILSEARKVFDEMCER 299

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAYAKSGDIENARKLFKEMP 167
           D+ +W  MVS L   G++++A KLF EMP R+  +WNTM+  YA+ G++E+A  LF +MP
Sbjct: 300 DAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMP 359

Query: 166 NRNVVSWNALLAGLSQNGQYDEALSVFSQMLTSGIKPDNATI 41
            ++++SW  ++   SQN QY +AL+++S+M  +GI PD  T+
Sbjct: 360 TKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTM 401



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/159 (27%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           +  ACA I +  LG++IH   V S+G++ +V++ ++L+DMY KC   + ++L+F ++ + 
Sbjct: 404 VASACAHIGALELGKEIH-HYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDK 462

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDV----VSWNTMVSAYAKSGDIENARKLF 179
           +   WN ++ GL   G  E A ++F  M    +    V++ +++SA   +G ++  R  F
Sbjct: 463 NLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRF 522

Query: 178 KEMP-----NRNVVSWNALLAGLSQNGQYDEALSVFSQM 77
             M        ++  +  ++  LS++G  +EAL +   M
Sbjct: 523 LSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSM 561



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/159 (22%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
 Frame = -2

Query: 490 LGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQM----VEPDSTSWNIM 323
           LG    A L+ ++  + ++    +++  Y + ++ + A+ ++ +M    + PD  + + +
Sbjct: 345 LGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTV 404

Query: 322 VSGLLSAGNLEAAGKLFNEMPHR----DVVSWNTMVSAYAKSGDIENARKLFKEMPNRNV 155
            S     G LE   ++ + +  +    DV   + +V  YAK G ++ +  +F ++ ++N+
Sbjct: 405 ASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNL 464

Query: 154 VSWNALLAGLSQNGQYDEALSVFSQMLTSGIKPDNATIL 38
             WNA++ GL+ +G  ++AL +F+ M    I P+  T +
Sbjct: 465 YCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFI 503


>ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/162 (38%), Positives = 102/162 (62%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           ++KAC  + +  LGQ +H  + K KG   ++FV  +L+D Y K      A  VF +M E 
Sbjct: 144 LVKACTFMCAVELGQMVHCHIWK-KGFESHLFVQTALVDFYSKLEILSEARKVFDEMCER 202

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAYAKSGDIENARKLFKEMP 167
           D+ +W  M+S L   G++++A KLF EMP R+  +WNTM+  Y + G++E+A  LF +MP
Sbjct: 203 DAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMP 262

Query: 166 NRNVVSWNALLAGLSQNGQYDEALSVFSQMLTSGIKPDNATI 41
            ++++SW  ++   SQN QY +AL+++S+M  +GI PD  T+
Sbjct: 263 TKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTM 304



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/159 (27%), Positives = 86/159 (54%), Gaps = 9/159 (5%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           +  ACA I +  LG++IH   V S+G++ +V++ ++L+DMY KC   + ++L+F ++ + 
Sbjct: 307 VASACAHIGALELGKEIH-HYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDK 365

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDV----VSWNTMVSAYAKSGDIENARKLF 179
           +   WN ++ GL   G  E A ++F  M    +    V++ +++SA   +G ++  R  F
Sbjct: 366 NLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRF 425

Query: 178 KEMP-----NRNVVSWNALLAGLSQNGQYDEALSVFSQM 77
             M        ++  +  ++  LS++G  +EAL +   M
Sbjct: 426 LSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSM 464



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 36/161 (22%), Positives = 83/161 (51%), Gaps = 8/161 (4%)
 Frame = -2

Query: 496 TGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQM----VEPDSTSWN 329
           T LG    A L+ ++  + ++    +++  Y + ++ + A+ ++ +M    + PD  + +
Sbjct: 246 TRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMS 305

Query: 328 IMVSGLLSAGNLEAAGKLFNEMPHR----DVVSWNTMVSAYAKSGDIENARKLFKEMPNR 161
            + S     G LE   ++ + +  +    DV   + +V  YAK G ++ +  +F ++ ++
Sbjct: 306 TVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDK 365

Query: 160 NVVSWNALLAGLSQNGQYDEALSVFSQMLTSGIKPDNATIL 38
           N+  WNA++ GL+ +G  ++AL +F+ M    I P+  T +
Sbjct: 366 NLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFI 406


>dbj|BAD37280.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group] gi|125596587|gb|EAZ36367.1|
           hypothetical protein OsJ_20695 [Oryza sativa Japonica
           Group] gi|218197849|gb|EEC80276.1| hypothetical protein
           OsI_22264 [Oryza sativa Indica Group]
          Length = 517

 Score =  137 bits (345), Expect = 1e-30
 Identities = 63/163 (38%), Positives = 104/163 (63%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           +L+ACA +  +  G+Q+H ++VK  G   + +V N+L++M+ KC     A ++  +  E 
Sbjct: 106 LLRACAGLPGSRAGRQVHGAVVKL-GFLKDAYVRNALINMFAKCGDLRVASVLLDEAGEG 164

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEMPHRDVVSWNTMVSAYAKSGDIENARKLFKEMP 167
           D  +W+ +++G  + G++ AA K+F+E  H+D+V WN M+ AYAK G++ENAR+LF   P
Sbjct: 165 DVVAWSAVIAGHAARGDMAAARKMFDECTHKDIVCWNVMLGAYAKHGEMENARELFDRAP 224

Query: 166 NRNVVSWNALLAGLSQNGQYDEALSVFSQMLTSGIKPDNATIL 38
            ++VVSWN ++ G +  G    AL VF +M  +G  PD ATI+
Sbjct: 225 EKDVVSWNTIITGYAAQGMLKHALEVFDEMRAAGWTPDEATIV 267



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 40/169 (23%)
 Frame = -2

Query: 424 NSLLDMYFKCRRDEAAMLVFQQMVEPDSTSWNIMVSGLLSAGNLEAAGKLFNEM------ 263
           N +L  Y K    E A  +F +  E D  SWN +++G  + G L+ A ++F+EM      
Sbjct: 201 NVMLGAYAKHGEMENARELFDRAPEKDVVSWNTIITGYAAQGMLKHALEVFDEMRAAGWT 260

Query: 262 ----------------------------------PHRDVVSWNTMVSAYAKSGDIENARK 185
                                             P   +V  N +VS YAK GD+  A +
Sbjct: 261 PDEATIVSLLSCCANTGLLDAGRMIHHQLHLERRPWISIVVGNALVSMYAKCGDLHTAVE 320

Query: 184 LFKEMPNRNVVSWNALLAGLSQNGQYDEALSVFSQMLTSGIKPDNATIL 38
            F  M + +V +WN+++ GL+ +GQ ++++  F +ML   I P+  + L
Sbjct: 321 GFNTMKDTDVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRIHPNEISFL 369



 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
 Frame = -2

Query: 526 ILKACAAITSTGLGQQIHASLVKSKGVSDNVFVLNSLLDMYFKCRRDEAAMLVFQQMVEP 347
           +L  CA       G+ IH  L   +    ++ V N+L+ MY KC     A+  F  M + 
Sbjct: 269 LLSCCANTGLLDAGRMIHHQLHLERRPWISIVVGNALVSMYAKCGDLHTAVEGFNTMKDT 328

Query: 346 DSTSWNIMVSGLLSAGNLEAAGKLFNEM----PHRDVVSWNTMVSAYAKSGDIENARKLF 179
           D  +WN ++ GL   G  E + + F +M     H + +S+  ++ A + +G +E+ +K F
Sbjct: 329 DVWTWNSVIGGLAFHGQAEQSVRFFKKMLEKRIHPNEISFLCVLGACSHAGLVEDGQKFF 388

Query: 178 KEMPNR-----NVVSWNALLAGLSQNGQYDEALSVFSQM 77
             M +R     N   ++ ++  L + G  DEA ++ S M
Sbjct: 389 YLMKDRYGIEPNARHYSCIVDMLGRAGLLDEAYAIVSNM 427