BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019677
         (1966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22633.3| unnamed protein product [Vitis vinifera]              406   e-110
ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing pro...   404   e-110
ref|XP_002513641.1| conserved hypothetical protein [Ricinus comm...   367   8e-99
ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008...   346   1e-92
ref|XP_003533145.1| PREDICTED: coiled-coil domain-containing pro...   345   2e-92

>emb|CBI22633.3| unnamed protein product [Vitis vinifera]
          Length = 606

 Score =  406 bits (1043), Expect = e-110
 Identities = 198/331 (59%), Positives = 253/331 (76%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1965 SGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSILLPTSRF 1786
            S  + D   +KLF+SK  +S E    LFVDTAVYSRNRCFRLALSSKAGK S+LLPT RF
Sbjct: 274  SAGEGDGNFKKLFISKGSTSAEFPCQLFVDTAVYSRNRCFRLALSSKAGKNSVLLPTGRF 333

Query: 1785 KCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYENLSTAPS-LA 1609
            KCK++CE++MFM SLIC +D DC+K L+CKMD++C+KTL FD E+  +    S++P   A
Sbjct: 334  KCKDMCEEEMFMASLICNIDVDCEKFLVCKMDLNCVKTLHFDMEENHNCRKHSSSPQDFA 393

Query: 1608 LHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRNRY 1429
            L ACT++   T F+G SPFPALD+FVESIASIGNVSG+IRSWYWFSEY ++VY+M RNRY
Sbjct: 394  LSACTSNVSGTCFMGNSPFPALDIFVESIASIGNVSGKIRSWYWFSEYRLMVYSMSRNRY 453

Query: 1428 CERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSIQS 1249
            CERIGRQHKSNHV+YVVD +R ++YQKC+DPDC+GYRSP RPIP DVIP+T+   +S+Q+
Sbjct: 454  CERIGRQHKSNHVIYVVDLRRAIFYQKCHDPDCRGYRSPSRPIPMDVIPNTAVLMDSVQT 513

Query: 1248 DDH-RVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQNP 1072
            + H    +N L + L +N+ + +   +D+ ITDSCKKD WWLEA++ AD  ES + M++ 
Sbjct: 514  EHHVESTSNHLGYSLVENDQECVSLYNDKSITDSCKKDAWWLEAIRFADNVESVQHMRD- 572

Query: 1071 GKLVADQGFDDDEGDCEWWMAVERTTSQTEQ 979
               ++D    DDE D +WWMA ERT SQTEQ
Sbjct: 573  ---LSDTENIDDEDD-DWWMAAERTASQTEQ 599


>ref|XP_002274252.2| PREDICTED: coiled-coil domain-containing protein 111 homolog [Vitis
            vinifera]
          Length = 632

 Score =  404 bits (1038), Expect = e-110
 Identities = 198/331 (59%), Positives = 252/331 (76%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1965 SGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSILLPTSRF 1786
            S  + D   +KLF+SK  +S E    LFVDTAVYSRNRCFRLALSSKAGK S+LLPT RF
Sbjct: 300  SAGEGDGNFKKLFISKGSTSAEFPCQLFVDTAVYSRNRCFRLALSSKAGKNSVLLPTGRF 359

Query: 1785 KCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYENLSTAPS-LA 1609
            KCK++CE++MFM SLIC +D DC+K L+CKMD++C+KTL FD E   +    S++P   A
Sbjct: 360  KCKDMCEEEMFMASLICNIDVDCEKFLVCKMDLNCVKTLHFDMEVNHNCRKHSSSPQDFA 419

Query: 1608 LHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRNRY 1429
            L ACT++   T F+G SPFPALD+FVESIASIGNVSG+IRSWYWFSEY ++VY+M RNRY
Sbjct: 420  LSACTSNVSGTCFMGNSPFPALDIFVESIASIGNVSGKIRSWYWFSEYRLMVYSMSRNRY 479

Query: 1428 CERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSIQS 1249
            CERIGRQHKSNHV+YVVD +R ++YQKC+DPDC+GYRSP RPIP DVIP+T+   +S+Q+
Sbjct: 480  CERIGRQHKSNHVIYVVDLRRAIFYQKCHDPDCRGYRSPSRPIPMDVIPNTAVLMDSVQT 539

Query: 1248 DDH-RVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQNP 1072
            + H    +N L + L +N+ + +   +D+ ITDSCKKD WWLEA++ AD  ES + M++ 
Sbjct: 540  EHHVESTSNHLGYSLVENDQECVSLYNDKSITDSCKKDAWWLEAIRFADNVESVQHMRD- 598

Query: 1071 GKLVADQGFDDDEGDCEWWMAVERTTSQTEQ 979
               ++D    DDE D +WWMA ERT SQTEQ
Sbjct: 599  ---LSDTENIDDEDD-DWWMAAERTASQTEQ 625


>ref|XP_002513641.1| conserved hypothetical protein [Ricinus communis]
            gi|223547549|gb|EEF49044.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 601

 Score =  367 bits (941), Expect = 8e-99
 Identities = 189/332 (56%), Positives = 236/332 (71%), Gaps = 4/332 (1%)
 Frame = -2

Query: 1965 SGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSILLPTSRF 1786
            S R++D + +KLFV K  SS E     F+DTAVYSRNR FRLALSSKAGK S+LLPT RF
Sbjct: 281  SSREKDGRYKKLFVRKG-SSSESASQPFIDTAVYSRNRVFRLALSSKAGKNSVLLPTGRF 339

Query: 1785 KCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYEN---LSTAPS 1615
            KCK++CE+DMFM SLIC MD DC+KLL+CKMD+DC+KTL FD+E   +Y +    +T  +
Sbjct: 340  KCKDMCEEDMFMASLICNMDADCEKLLVCKMDLDCVKTLHFDTE--ANYYSRRCFTTQEN 397

Query: 1614 LALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRN 1435
             A   CTT        GKSPFP+LD FVESIA++G++SG+IRSWYWFSEY ++VY+M RN
Sbjct: 398  DASMTCTT--------GKSPFPSLDKFVESIATVGSLSGKIRSWYWFSEYELMVYSMSRN 449

Query: 1434 RYCERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSI 1255
            RYCERIGRQHKSNHV+YVVD +R VYYQKC+DPDC+GYRSP RP+P  +IPD S  + S 
Sbjct: 450  RYCERIGRQHKSNHVIYVVDLRRAVYYQKCHDPDCQGYRSPLRPVPLYLIPDPSFSYASA 509

Query: 1254 QSDDH-RVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQ 1078
            Q  +H  + N  LD+Q   N  + I   S++   DS  KD WWLEA K+AD+ E+ +K  
Sbjct: 510  QVANHIGLANGTLDYQSANNNHEGIMLFSEEYDIDSSSKDSWWLEAAKVADDIENMKKTM 569

Query: 1077 NPGKLVADQGFDDDEGDCEWWMAVERTTSQTE 982
                L  + G +DD     WW+AVERT SQ E
Sbjct: 570  ELSTL-ENIGEEDD----NWWVAVERTASQAE 596


>ref|NP_001154775.1| DNA primase [Arabidopsis thaliana] gi|332008880|gb|AED96263.1| DNA
            primase [Arabidopsis thaliana]
          Length = 614

 Score =  346 bits (887), Expect = 1e-92
 Identities = 174/322 (54%), Positives = 222/322 (68%), Gaps = 3/322 (0%)
 Frame = -2

Query: 1965 SGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSILLPTSRF 1786
            + ++ D +L+KLFV K+ +    L  LFVDTAVYSRNRCFRLALSSKAGK S+LLPT RF
Sbjct: 294  NAKETDERLRKLFVHKEANDSASL--LFVDTAVYSRNRCFRLALSSKAGKTSVLLPTGRF 351

Query: 1785 KCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYENL---STAPS 1615
            KCK++ E+D+FM SLIC ++ DC+KLL+CKM+ DCMKTLCFD+E   +  NL     A  
Sbjct: 352  KCKDMGERDVFMTSLICNVESDCEKLLVCKMESDCMKTLCFDTE--VNSNNLVRDQNAQK 409

Query: 1614 LALHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRN 1435
              L+A T+D  T+YF GKSPFP LD F+ES AS GNV G+IR WYWFSE G+IVY+MLRN
Sbjct: 410  FQLNASTSDMSTSYFGGKSPFPQLDQFIESTASTGNVPGKIRCWYWFSEDGLIVYSMLRN 469

Query: 1434 RYCERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSI 1255
            RYCERIGR+HKSNHVMY+VD +R +YYQKCYDPDC+ YRSP RP+PD  +P+    +   
Sbjct: 470  RYCERIGREHKSNHVMYIVDLRRGIYYQKCYDPDCRDYRSPIRPVPDSYLPEDMVYYQGA 529

Query: 1254 QSDDHRVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQN 1075
              +       D  +  G+  VD   CD D     +  +  WWLEAVK+AD+ ES+ K   
Sbjct: 530  TQN-----LCDNLYSEGECHVDK-ECDPD----SAASRGSWWLEAVKVADDLESKPKTLE 579

Query: 1074 PGKLVADQGFDDDEGDCEWWMA 1009
            P        +++ E D +WW+A
Sbjct: 580  P------LTWENYEEDDDWWVA 595


>ref|XP_003533145.1| PREDICTED: coiled-coil domain-containing protein 111 homolog [Glycine
            max]
          Length = 634

 Score =  345 bits (886), Expect = 2e-92
 Identities = 172/330 (52%), Positives = 224/330 (67%), Gaps = 2/330 (0%)
 Frame = -2

Query: 1965 SGRDRDHKLQKLFVSKDLSSHEPLHHLFVDTAVYSRNRCFRLALSSKAGKKSILLPTSRF 1786
            + R++D   +KLFV KD S++E    LFVDTAVYSRNRCFRL LSSKAGK+S+LLPT RF
Sbjct: 304  NAREKDKSFEKLFVMKDSSNNESAGQLFVDTAVYSRNRCFRLPLSSKAGKRSVLLPTKRF 363

Query: 1785 KCKNLCEQDMFMDSLICKMDGDCQKLLICKMDVDCMKTLCFDSEDKCDYENLSTAP-SLA 1609
            KCK+L E+D+FM SLIC MD DC+  L+CK D+DC+KTL FD+E+  +  N +  P    
Sbjct: 364  KCKDLGEEDIFMASLICNMDVDCKTYLVCKTDLDCVKTLHFDTEENSNVSNSTQIPPEFT 423

Query: 1608 LHACTTDFPTTYFVGKSPFPALDMFVESIASIGNVSGRIRSWYWFSEYGVIVYNMLRNRY 1429
            L   T+D  TTYF+GKSPFP LD F+ S+AS+GN+ G I SWY+FSE+G++VY+M +NRY
Sbjct: 424  LGTSTSDVSTTYFMGKSPFPFLDKFILSVASVGNIPGNIHSWYYFSEFGLMVYSMTKNRY 483

Query: 1428 CERIGRQHKSNHVMYVVDFKRTVYYQKCYDPDCKGYRSPFRPIPDDVIPDTSTCFNSI-Q 1252
            CERIGRQHKSN+V+YVVD +  VYYQKC+DPDC+GYRSP R IP  V  + S    S   
Sbjct: 484  CERIGRQHKSNNVIYVVDLRMAVYYQKCHDPDCRGYRSPSRQIPVHVFSNPSDVIGSFGL 543

Query: 1251 SDDHRVGNNDLDHQLGQNEVDHIPCDSDQKITDSCKKDGWWLEAVKIADEFESRRKMQNP 1072
             DD +  ++ L HQL  N+  ++    D    +    D WWLEA+++ ++      M+N 
Sbjct: 544  LDDEQPVDDKLRHQLDDNKEQNLLQFKD--TVEDNSNDSWWLEAIRVVED------MENK 595

Query: 1071 GKLVADQGFDDDEGDCEWWMAVERTTSQTE 982
                  +  D+DE   EWW AVE T SQ E
Sbjct: 596  QTKTEQEVIDEDE---EWWQAVESTASQVE 622