BLASTX nr result

ID: Coptis24_contig00019673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019673
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524389.1| protein binding protein, putative [Ricinus c...   181   2e-43
emb|CBI27081.3| unnamed protein product [Vitis vinifera]              171   2e-40
ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242...   169   1e-39
ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782...   168   1e-39
ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|2...   166   6e-39

>ref|XP_002524389.1| protein binding protein, putative [Ricinus communis]
            gi|223536350|gb|EEF38000.1| protein binding protein,
            putative [Ricinus communis]
          Length = 665

 Score =  181 bits (459), Expect = 2e-43
 Identities = 133/342 (38%), Positives = 180/342 (52%), Gaps = 28/342 (8%)
 Frame = -1

Query: 943  NMSAPNFSLWNMSSPNLTSSNMSAPYFPASNMSASNFTASNIIAPSFHAFSSREYSPPVL 764
            N+  PN    N+  PNL +SN+ A   P +N+ ASN   +N++A +       + S P+L
Sbjct: 239  NLPGPNLPTSNLPVPNLPTSNLPASNLPTTNLPASNLPTTNLLASNLPV-PLPDISSPLL 297

Query: 763  PPFSGGSINLVSSALQSTVLPS---------QPAAVASDXXXXXXXXXXXXXXXXXXXXS 611
               S GS+NL S++   + LP+           A++AS+                    S
Sbjct: 298  SA-STGSLNLASTSSAPSTLPATLPSTLPSVHSASLASETIPSLVPNKTPSSTLPAANLS 356

Query: 610  AYLP-------SSLDIHAVTHPTLETAPMLS---VPYQTKPHYVSPMLGTFNYSQSETST 461
              LP       S  +++ +  P    +  +S   VPYQ+     + ++ + N  ++E  T
Sbjct: 357  PSLPALSPLTSSGPELNTIIPPLSNKSNAISGPTVPYQSIAQPTALVVPS-NSLRTEAPT 415

Query: 460  TSLVTPGQLLQPVPTSISSPVSLDPAKKDVEAVRVES-SKPLPSAPVTTQA--PILPLPS 290
             SLVTPGQLLQ  PT++++   +    KDVE V+V S S   PS PV T+A  PILPLP 
Sbjct: 416  PSLVTPGQLLQSGPTTVTTLQPVQTVHKDVEVVQVSSTSSTEPSVPVVTEAQPPILPLPV 475

Query: 289  PT--DQKLNGPPFTHHNRTNRGHERGRRSGISRPVTTFTEEFDFTAMNEKFKKDEVWGDL 116
            P     K NG PF H  +  RG ERGR +G S PVT FTE+FDF AMNEKFKKDEVWG L
Sbjct: 476  PARASHKPNGAPF-HSRQGYRGRERGRGTGNSHPVTKFTEDFDFMAMNEKFKKDEVWGHL 534

Query: 115  GKANK---ESDSKHDGDVSYNSDNLGSVKLE-KPVYVKDDFF 2
            GK+NK   E     D D S   D+    K++ KPVY KDDFF
Sbjct: 535  GKSNKKDREDGKASDEDDSQEEDDDELNKIDTKPVYNKDDFF 576


>emb|CBI27081.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score =  171 bits (433), Expect = 2e-40
 Identities = 139/324 (42%), Positives = 170/324 (52%), Gaps = 24/324 (7%)
 Frame = -1

Query: 901  PNLTSSNMSAPYFPAS-NMSASNFTASNIIAPSFHAFSSREYSPPVLPPFSGGSINLVSS 725
            P L+   M  P F AS    A N   SN+           EYS P+LP  S GS+NL S+
Sbjct: 181  PVLSMPPMQYPGFNASLQPGAPNLPGSNL----------PEYSSPLLPT-SSGSLNLTST 229

Query: 724  ALQSTVLPSQPAAVASDXXXXXXXXXXXXXXXXXXXXSAYLP-------SSLDIHAVTHP 566
            +L  + LPS   +  S+                       LP       SS +I+A+  P
Sbjct: 230  SLSPSTLPSNLPST-SETLSSLMPNKVPNPTLPSVTLGISLPLVTPLNTSSSEINAIAPP 288

Query: 565  TLETAPMLS---VPYQTKPHYVSPMLGTFNYSQSETSTTSLVTPGQLLQPVPTSISSPVS 395
                   +S   +PYQT    + P +GT + +  E +  SLVTPGQLLQ  PT+ISS  S
Sbjct: 289  ISNKPNAVSGPTLPYQTISQSI-PSVGTSSPNHPEIAAPSLVTPGQLLQSGPTTISSSPS 347

Query: 394  LDPAKKDVEAVRVESSKPLPSA-PVTTQA--PILPLPSP--TDQKLNGPPFTHHNRTNRG 230
               A KDVE V+V SS    S+ PV+ +A  PILPLP P  T QKLNG PF   +   RG
Sbjct: 348  SQTAHKDVEVVQVSSSASQESSVPVSAEAQPPILPLPVPSRTVQKLNGAPFQGRHGY-RG 406

Query: 229  HERGRRSGISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANKES--DSKHDGDVS---- 68
              RGR +G SRPVT FTE+FDF AMNEKFKKDEVWG LGK NK    D + DG VS    
Sbjct: 407  --RGRGTGGSRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKGNKSQSRDKEVDGKVSDEDD 464

Query: 67   -YNSDNLGSVKLE-KPVYVKDDFF 2
              + D+    K E KP+Y KDDFF
Sbjct: 465  YEDEDDAELPKFEVKPIYNKDDFF 488


>ref|XP_002281060.1| PREDICTED: uncharacterized protein LOC100242198 [Vitis vinifera]
          Length = 616

 Score =  169 bits (427), Expect = 1e-39
 Identities = 136/327 (41%), Positives = 175/327 (53%), Gaps = 26/327 (7%)
 Frame = -1

Query: 904  SPNLTSSNM---SAPYFPASNMSASNFTASNIIAPSFHAFSSREYSPPVLPPFSGGSINL 734
            +PNL  SN+   S+P  P S+ S  N T++++ +PS    +     P +LP       ++
Sbjct: 223  APNLPGSNLPEYSSPLLPTSSGSL-NLTSTSL-SPSTLPSNLPSSMPSILP---SSMPSI 277

Query: 733  VSSALQSTVLPSQPAAVASDXXXXXXXXXXXXXXXXXXXXSAYLP-------SSLDIHAV 575
            + S L S + P   AA+AS+                       LP       SS +I+A+
Sbjct: 278  LPSTLPSALPPVPSAALASETLSSLMPNKVPNPTLPSVTLGISLPLVTPLNTSSSEINAI 337

Query: 574  THPTLETAPMLS---VPYQTKPHYVSPMLGTFNYSQSETSTTSLVTPGQLLQPVPTSISS 404
              P       +S   +PYQT    + P +GT + +  E +  SLVTPGQLLQ  PT+ISS
Sbjct: 338  APPISNKPNAVSGPTLPYQTISQSI-PSVGTSSPNHPEIAAPSLVTPGQLLQSGPTTISS 396

Query: 403  PVSLDPAKKDVEAVRVESSKPLPSA-PVTTQA--PILPLPSP--TDQKLNGPPFTHHNRT 239
              S   A KDVE V+V SS    S+ PV+ +A  PILPLP P  T QKLNG PF   +  
Sbjct: 397  SPSSQTAHKDVEVVQVSSSASQESSVPVSAEAQPPILPLPVPSRTVQKLNGAPFQGRHGY 456

Query: 238  NRGHERGRRSGISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKANKES--DSKHDGDVS- 68
             RG  RGR +G SRPVT FTE+FDF AMNEKFKKDEVWG LGK NK    D + DG VS 
Sbjct: 457  -RG--RGRGTGGSRPVTKFTEDFDFMAMNEKFKKDEVWGHLGKGNKSQSRDKEVDGKVSD 513

Query: 67   ----YNSDNLGSVKLE-KPVYVKDDFF 2
                 + D+    K E KP+Y KDDFF
Sbjct: 514  EDDYEDEDDAELPKFEVKPIYNKDDFF 540


>ref|XP_003516862.1| PREDICTED: uncharacterized protein LOC100782890 [Glycine max]
          Length = 610

 Score =  168 bits (426), Expect = 1e-39
 Identities = 126/329 (38%), Positives = 169/329 (51%), Gaps = 16/329 (4%)
 Frame = -1

Query: 940  MSAPNFSLWNMSSPNLTSSNMSAPYFPASNMSASNFTASNIIAPSFHAFSSREYSPPVLP 761
            M  PNF+      P+L + + + P  P+S +  S    S   A    A S+   +P  LP
Sbjct: 217  MQYPNFT------PSLPNVSSNLPELPSSLLPVSASIPSITSASLPPAPSALAPAPSALP 270

Query: 760  PFSGGSINLVSSALQSTVLPSQPAAVASDXXXXXXXXXXXXXXXXXXXXSAYLPSSLDIH 581
            P +  S++  SSAL S    +  + +                        +   S  DI+
Sbjct: 271  P-APSSLSSASSALSSVPSVTLASEILPVSVTNKAPIVSTSAAMLASNLLSLTISGPDIN 329

Query: 580  AVTHPT---LETAPMLSVPYQTKPHYVSPMLGTFNYSQSETSTTSLVTPGQLLQPVPTSI 410
            A+  P    L      S+PYQT     S +LG+     +ETS  SLVTPGQLLQP P+ +
Sbjct: 330  AIVPPISRKLHAISGSSLPYQTVSQLSSTVLGSSTSIHTETSAPSLVTPGQLLQPGPSIV 389

Query: 409  SSPVSLDPAKKDVEAVRVES-SKPLPSAPVT--TQAPILPLP---SPTDQKLNGPPFTHH 248
            SS        KDVE V+V S S P PS PV+  TQ PILPLP    P+ +    P  THH
Sbjct: 390  SSAQPSQAPHKDVEVVQVSSTSSPEPSVPVSAETQPPILPLPVTSRPSYRPGGAPSQTHH 449

Query: 247  NRTNRGHERGRRSGISRPVTTFTEEFDFTAMNEKFKKDEVWGDLGKA---NKESDSKHDG 77
                RG  RGR +G   PVT FTE+FDF AMNEKFKKDEVWG LGK+   +KE D + + 
Sbjct: 450  GYNYRGRGRGRGTGGLHPVTKFTEDFDFMAMNEKFKKDEVWGHLGKSKSHSKEKDGEENA 509

Query: 76   -DVSY---NSDNLGSVKLEKPVYVKDDFF 2
             D  Y   ++D++ ++++ KP+Y KDDFF
Sbjct: 510  FDEDYQDEDNDDVSNIEV-KPIYNKDDFF 537


>ref|XP_002311428.1| predicted protein [Populus trichocarpa] gi|222851248|gb|EEE88795.1|
            predicted protein [Populus trichocarpa]
          Length = 631

 Score =  166 bits (421), Expect = 6e-39
 Identities = 132/342 (38%), Positives = 167/342 (48%), Gaps = 28/342 (8%)
 Frame = -1

Query: 943  NMSAPNFSLWNMSSPNLTSSNMSAPYFPASNMSASNFTASNIIAPSFHAFSSREYSPPVL 764
            N S P  +L N++S  L   N+ A   P  N+ ASN   SN+   +  A S  +   P+L
Sbjct: 221  NTSLPTGAL-NLASSTLPPLNLPASTLPPFNLPASNLPPSNLPVSTLPA-SLPDVPLPLL 278

Query: 763  PPFSGGSINLVSSALQSTVLPSQPAAVASDXXXXXXXXXXXXXXXXXXXXSAYLP----- 599
            P  +      + S L STV     A++ S+                        P     
Sbjct: 279  PGIT------MPSTLPSTVPLIPAASLPSETLPSLIPNKVPISALPTTNLGVTFPVLSPV 332

Query: 598  --SSLDIHAVTHPTLETAPMLS---VPYQTKPHYVSPMLGTFNYSQSETSTT--SLVTPG 440
              SS D++ +  P       +S   +PYQ+     S  +   N  ++ET T   SLVTP 
Sbjct: 333  STSSSDLNTIVPPISNKPSSISGPTMPYQSVTQSASSAVLASNSLRTETPTPTPSLVTPD 392

Query: 439  QLLQPVPTSISSPVSLDPAKKDVEAVRVESS-------KPLPSAPVTTQA--PILPLPSP 287
            QLLQ  PT + SP  +  A KDVE V+  ++        P PS PV TQA  PILPLP P
Sbjct: 393  QLLQSGPTIVPSPQPVQTAHKDVEVVKAAAAAAAAAAPSPEPSVPVATQAQPPILPLPVP 452

Query: 286  T--DQKLNGPPFTHHNRTNRGHERGRRSGISRPVTTFTEEFDFTAMNEKFKKDEVWGDLG 113
            +    K NG  F H     RG ERGR SG SRPVT FTE+FDF AMNEKFKKDEVWG LG
Sbjct: 453  SRASHKPNGATF-HARHGYRGRERGRGSGSSRPVTKFTEDFDFIAMNEKFKKDEVWGHLG 511

Query: 112  KANK-ESDSKHDGDVSYNSDNLGSVKLE----KPVYVKDDFF 2
            K NK  S  + DG+ S   D+    + E    +PVY KDDFF
Sbjct: 512  KNNKSHSKDREDGNASGEDDSQDEDENELAKIEPVYNKDDFF 553


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