BLASTX nr result

ID: Coptis24_contig00019669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019669
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270724.1| PREDICTED: transforming growth factor-beta r...   290   2e-76
ref|XP_002303701.1| predicted protein [Populus trichocarpa] gi|2...   279   5e-73
ref|XP_002523291.1| conserved hypothetical protein [Ricinus comm...   273   3e-71
ref|XP_003521040.1| PREDICTED: transforming growth factor-beta r...   261   1e-67
ref|XP_003530110.1| PREDICTED: transforming growth factor-beta r...   259   4e-67

>ref|XP_002270724.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1 homolog [Vitis vinifera]
            gi|302143252|emb|CBI20547.3| unnamed protein product
            [Vitis vinifera]
          Length = 1011

 Score =  290 bits (743), Expect = 2e-76
 Identities = 153/232 (65%), Positives = 184/232 (79%)
 Frame = -2

Query: 858  EELETLLEDSVHLRTLAFLYASKQMSSKALAVWRILAKTYSSRIWEDPSVQNVPQVTCAD 679
            EELETLL++S HLRTLAFLYASK MSSKALA+WRILA+ YSS +W+DP+V++    T A 
Sbjct: 588  EELETLLDESGHLRTLAFLYASKGMSSKALAIWRILARNYSSGLWKDPAVESELLDTNAS 647

Query: 678  ALPCQKTAAIEASKLLEVSTDQEIVLQHLGWVADVDHSLAVQILTSENRATKLSPEAVIA 499
             L  ++  AIEA+K+LE S+DQ++VLQHLGW+ADV   LAV++LTSE RA +LSP+ VIA
Sbjct: 648  TLSGKEAVAIEATKILEESSDQDLVLQHLGWIADVCQVLAVRVLTSERRADQLSPDEVIA 707

Query: 498  AIDPKKVDILQRYLKWLIEDQGSDDAQFHTLYALSLANSALEDADNGSYPQRSDARTSEE 319
            AIDPKKV+ILQRYL+WLIEDQ S+D QFHTLYALSLA SA+E  +  S  Q  DA   EE
Sbjct: 708  AIDPKKVEILQRYLQWLIEDQDSNDTQFHTLYALSLAKSAIEAFETESSFQNPDAGRLEE 767

Query: 318  MNVFDVEWSNYFKSSVRERLQLFLQSSDLYDPDEVLDLIEGSEFWLEKVDLY 163
                  E ++ F+S VRERLQ+FLQSSDLYDP+EVLDLIEGSE WLEK  LY
Sbjct: 768  TCSAGSERNSIFQSPVRERLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILY 819


>ref|XP_002303701.1| predicted protein [Populus trichocarpa] gi|222841133|gb|EEE78680.1|
            predicted protein [Populus trichocarpa]
          Length = 799

 Score =  279 bits (714), Expect = 5e-73
 Identities = 145/232 (62%), Positives = 178/232 (76%)
 Frame = -2

Query: 858  EELETLLEDSVHLRTLAFLYASKQMSSKALAVWRILAKTYSSRIWEDPSVQNVPQVTCAD 679
            EELETLL++S HLRTLAFLYASK MSSKAL +WRILAK YSS +W+DP+ ++       +
Sbjct: 376  EELETLLDESGHLRTLAFLYASKGMSSKALTIWRILAKNYSSGLWKDPAREHEFLDGNTN 435

Query: 678  ALPCQKTAAIEASKLLEVSTDQEIVLQHLGWVADVDHSLAVQILTSENRATKLSPEAVIA 499
             +  ++ AA EASK+LE  +DQ++VLQHLGW+ADV+  L VQ+LTSE R  +LSP+ +IA
Sbjct: 436  VISGREVAATEASKILEELSDQDLVLQHLGWIADVNPLLTVQVLTSEKRVDQLSPDEIIA 495

Query: 498  AIDPKKVDILQRYLKWLIEDQGSDDAQFHTLYALSLANSALEDADNGSYPQRSDARTSEE 319
            AIDPKKV+ILQRYL+WLIEDQ S D QFHTLYALSLA SA+E  +  S  Q  D    EE
Sbjct: 496  AIDPKKVEILQRYLQWLIEDQDSGDTQFHTLYALSLAKSAIETFEVQSTSQEPDDGRLEE 555

Query: 318  MNVFDVEWSNYFKSSVRERLQLFLQSSDLYDPDEVLDLIEGSEFWLEKVDLY 163
              + D   ++ F+S VRERLQ+FLQSSDLYDP++VLDLIEGSE WLEK  LY
Sbjct: 556  TKISDPGGNSIFQSPVRERLQIFLQSSDLYDPEDVLDLIEGSELWLEKAILY 607


>ref|XP_002523291.1| conserved hypothetical protein [Ricinus communis]
            gi|223537465|gb|EEF39092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1005

 Score =  273 bits (699), Expect = 3e-71
 Identities = 145/232 (62%), Positives = 175/232 (75%)
 Frame = -2

Query: 858  EELETLLEDSVHLRTLAFLYASKQMSSKALAVWRILAKTYSSRIWEDPSVQNVPQVTCAD 679
            EELETLL+DS HLRTLAFLYASK MSSKALA+WRILA+ YSS +WED  V++  Q    +
Sbjct: 582  EELETLLDDSGHLRTLAFLYASKGMSSKALAMWRILARNYSSGLWEDTVVESDLQEGNTN 641

Query: 678  ALPCQKTAAIEASKLLEVSTDQEIVLQHLGWVADVDHSLAVQILTSENRATKLSPEAVIA 499
             L  ++  AIEASK+LE  +DQ++VLQHLGW+AD++  LAV++LTS+ R   LSP+ VIA
Sbjct: 642  ILSGKEITAIEASKILEELSDQDLVLQHLGWIADINPVLAVEVLTSKKRVNHLSPDEVIA 701

Query: 498  AIDPKKVDILQRYLKWLIEDQGSDDAQFHTLYALSLANSALEDADNGSYPQRSDARTSEE 319
            AIDPKKV+ILQRYL+WLIEDQ S D QFHTLYALSLA SA+E     S  +  D    + 
Sbjct: 702  AIDPKKVEILQRYLQWLIEDQESTDIQFHTLYALSLAKSAIESFTLESASENPDDERVDV 761

Query: 318  MNVFDVEWSNYFKSSVRERLQLFLQSSDLYDPDEVLDLIEGSEFWLEKVDLY 163
                D   ++ F+S VRERLQ+FL SSDLYDP+EVLDLIEGSE WLEK  LY
Sbjct: 762  AKFSDFGRNSIFQSPVRERLQIFLLSSDLYDPEEVLDLIEGSELWLEKAILY 813


>ref|XP_003521040.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1-like [Glycine max]
          Length = 968

 Score =  261 bits (668), Expect = 1e-67
 Identities = 133/232 (57%), Positives = 177/232 (76%)
 Frame = -2

Query: 858  EELETLLEDSVHLRTLAFLYASKQMSSKALAVWRILAKTYSSRIWEDPSVQNVPQVTCAD 679
            EELE +LE+S HLRTLAFL ASK MSSKA+ +WRILA+ YSS +W+DPS++N  Q +  +
Sbjct: 569  EELEQMLEESGHLRTLAFLCASKGMSSKAVHIWRILARNYSSGLWKDPSLENNTQNSGGN 628

Query: 678  ALPCQKTAAIEASKLLEVSTDQEIVLQHLGWVADVDHSLAVQILTSENRATKLSPEAVIA 499
             +  +  AA EASK+LE S+DQE++LQHLGW+AD++  LAV +LTS+ R  +LSP+ V+ 
Sbjct: 629  LISGRVIAAAEASKILEESSDQELILQHLGWIADINQVLAVNVLTSDKREIELSPDEVVT 688

Query: 498  AIDPKKVDILQRYLKWLIEDQGSDDAQFHTLYALSLANSALEDADNGSYPQRSDARTSEE 319
             IDP+K +ILQRYL+WLIEDQ  +D Q HTLYALSLA SA+E  ++ +  +  D+   E 
Sbjct: 689  TIDPQKAEILQRYLQWLIEDQDCNDTQLHTLYALSLAKSAIEAFESENISENLDSGNIET 748

Query: 318  MNVFDVEWSNYFKSSVRERLQLFLQSSDLYDPDEVLDLIEGSEFWLEKVDLY 163
             ++  ++ ++ F+  VRERLQ+FLQSSDLYDP+EVLDLIEGSE WLEK  LY
Sbjct: 749  RSLAMLK-NSIFQIPVRERLQIFLQSSDLYDPEEVLDLIEGSELWLEKAILY 799


>ref|XP_003530110.1| PREDICTED: transforming growth factor-beta receptor-associated
            protein 1-like [Glycine max]
          Length = 981

 Score =  259 bits (663), Expect = 4e-67
 Identities = 132/232 (56%), Positives = 176/232 (75%)
 Frame = -2

Query: 858  EELETLLEDSVHLRTLAFLYASKQMSSKALAVWRILAKTYSSRIWEDPSVQNVPQVTCAD 679
            EELE +LE+S HLRTLAFL ASK MSSKA+ +WRILA+ YSS +W+DPS++N+ Q +  +
Sbjct: 582  EELEQMLEESGHLRTLAFLCASKGMSSKAVHIWRILARNYSSGLWKDPSLENITQNSGEN 641

Query: 678  ALPCQKTAAIEASKLLEVSTDQEIVLQHLGWVADVDHSLAVQILTSENRATKLSPEAVIA 499
             +  +  AA EASK+LE S+DQE++LQHLGW+AD+   LAV +LTS+ R  +LSP+ V+ 
Sbjct: 642  LISGRAIAAAEASKILEESSDQELILQHLGWIADISQVLAVNVLTSDKREIQLSPDEVVT 701

Query: 498  AIDPKKVDILQRYLKWLIEDQGSDDAQFHTLYALSLANSALEDADNGSYPQRSDARTSEE 319
             IDP+KV+ILQRYL+WLIEDQ  +D Q HTLYALSLA SA++  ++ +  +  D+     
Sbjct: 702  TIDPQKVEILQRYLQWLIEDQDCNDTQLHTLYALSLAKSAIKAFESENISENLDSGNIGT 761

Query: 318  MNVFDVEWSNYFKSSVRERLQLFLQSSDLYDPDEVLDLIEGSEFWLEKVDLY 163
             ++  ++ ++ FK  VRERLQ+FLQSSDLYDP+EV DLIEGSE WLEK  LY
Sbjct: 762  RSLAMLK-NSIFKIPVRERLQIFLQSSDLYDPEEVHDLIEGSELWLEKAILY 812


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