BLASTX nr result
ID: Coptis24_contig00019649
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019649 (730 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003540499.1| PREDICTED: ubiquitin domain-containing prote... 142 5e-32 ref|NP_001238246.1| uncharacterized protein LOC100306399 [Glycin... 141 1e-31 ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|2... 141 2e-31 ref|XP_002267858.1| PREDICTED: ubiquitin domain-containing prote... 140 2e-31 ref|XP_003596315.1| Ubiquitin domain-containing protein [Medicag... 140 3e-31 >ref|XP_003540499.1| PREDICTED: ubiquitin domain-containing protein 1-like [Glycine max] Length = 114 Score = 142 bits (359), Expect = 5e-32 Identities = 71/114 (62%), Positives = 76/114 (66%), Gaps = 1/114 (0%) Frame = -1 Query: 622 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWDTAPHYGGRKEIWDXXX 446 MGC GSSQ W H QPIT TQL ++RDEFWDTAPHYGGRKEIWD Sbjct: 1 MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALR 60 Query: 445 XXXXXXXXXXXAIVDSAGVIVSSADLTTCYDERGAKYELPRYVLSEPINLIRES 284 IVDSAGVIV S+DLT CYDERGAKYELP+YVLSEP NLIR+S Sbjct: 61 AAAEADLTLAQVIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDS 114 >ref|NP_001238246.1| uncharacterized protein LOC100306399 [Glycine max] gi|255628415|gb|ACU14552.1| unknown [Glycine max] Length = 114 Score = 141 bits (356), Expect = 1e-31 Identities = 71/114 (62%), Positives = 77/114 (67%), Gaps = 1/114 (0%) Frame = -1 Query: 622 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWDTAPHYGGRKEIWDXXX 446 MGC GSSQ W H QPIT TQL ++RDEFWDTAPHYGGRKEIWD Sbjct: 1 MGCAGSSQSKPDGAVKKIRKPKPWKHPQPITKTQLTQLRDEFWDTAPHYGGRKEIWDALR 60 Query: 445 XXXXXXXXXXXAIVDSAGVIVSSADLTTCYDERGAKYELPRYVLSEPINLIRES 284 AIVDSAGVIV S+DLT CYDERGAKYELP+YVLSEP NLIR++ Sbjct: 61 AAAEADLTLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNLIRDT 114 >ref|XP_002317449.1| predicted protein [Populus trichocarpa] gi|222860514|gb|EEE98061.1| predicted protein [Populus trichocarpa] Length = 114 Score = 141 bits (355), Expect = 2e-31 Identities = 72/114 (63%), Positives = 77/114 (67%), Gaps = 1/114 (0%) Frame = -1 Query: 622 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWDTAPHYGGRKEIWDXXX 446 MGC GSSQ W H QPIT +QL +MRDEFWDTAPHYGGRKEIWD Sbjct: 1 MGCAGSSQAKSDGNVKKIRKPKPWKHPQPITKSQLMQMRDEFWDTAPHYGGRKEIWDALR 60 Query: 445 XXXXXXXXXXXAIVDSAGVIVSSADLTTCYDERGAKYELPRYVLSEPINLIRES 284 AIVDSAGVIV +ADLT CYDERGAKYELP+YVLSEP NLIRE+ Sbjct: 61 AAADAELSLAQAIVDSAGVIVQNADLTICYDERGAKYELPKYVLSEPTNLIRET 114 >ref|XP_002267858.1| PREDICTED: ubiquitin domain-containing protein 1 [Vitis vinifera] gi|297740542|emb|CBI30724.3| unnamed protein product [Vitis vinifera] Length = 114 Score = 140 bits (354), Expect = 2e-31 Identities = 71/114 (62%), Positives = 78/114 (68%), Gaps = 1/114 (0%) Frame = -1 Query: 622 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWDTAPHYGGRKEIWDXXX 446 MGC GSS+ W HSQ +T TQL +MRDEFWDTAPHYGG+KEIWD Sbjct: 1 MGCTGSSRAKGDESSKKIRRPKPWKHSQALTRTQLKQMRDEFWDTAPHYGGQKEIWDALR 60 Query: 445 XXXXXXXXXXXAIVDSAGVIVSSADLTTCYDERGAKYELPRYVLSEPINLIRES 284 AIVDSAGVIV SADLTTCYDERGAKYELP+YVLSEP NLIR++ Sbjct: 61 AATEADLTLAQAIVDSAGVIVQSADLTTCYDERGAKYELPKYVLSEPTNLIRDN 114 >ref|XP_003596315.1| Ubiquitin domain-containing protein [Medicago truncatula] gi|355485363|gb|AES66566.1| Ubiquitin domain-containing protein [Medicago truncatula] gi|388514353|gb|AFK45238.1| unknown [Medicago truncatula] Length = 114 Score = 140 bits (353), Expect = 3e-31 Identities = 71/114 (62%), Positives = 77/114 (67%), Gaps = 1/114 (0%) Frame = -1 Query: 622 MGCVGSSQXXXXXXXXXXXXXP-WNHSQPITNTQLNRMRDEFWDTAPHYGGRKEIWDXXX 446 MGC GSSQ W H QPIT TQL ++RDEFWDTAPHYGGRKEIWD Sbjct: 1 MGCAGSSQAKADGTVKKIRKPKPWKHPQPITKTQLIQLRDEFWDTAPHYGGRKEIWDALR 60 Query: 445 XXXXXXXXXXXAIVDSAGVIVSSADLTTCYDERGAKYELPRYVLSEPINLIRES 284 AIVDSAGVIV S+DLT CYDERGAKYELP+YVLSEP N+I+ES Sbjct: 61 AAAEADLSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNMIQES 114