BLASTX nr result

ID: Coptis24_contig00019642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019642
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283551.1| PREDICTED: uncharacterized protein LOC100250...    90   3e-16
ref|XP_002309279.1| predicted protein [Populus trichocarpa] gi|2...    83   5e-14
ref|XP_004168936.1| PREDICTED: uncharacterized protein LOC101227...    80   3e-13
ref|XP_004136726.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    80   3e-13
ref|XP_003573908.1| PREDICTED: uncharacterized protein LOC100845...    80   3e-13

>ref|XP_002283551.1| PREDICTED: uncharacterized protein LOC100250050 [Vitis vinifera]
          Length = 645

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 62/165 (37%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
 Frame = -1

Query: 629 KTEQARAKPKKVTRARAKPKAFLRKPKVLKMD-----------PEAVDILKGSVN---YA 492
           K  +     +K+  A A+P A    PK  +             P+  ++ + S N    A
Sbjct: 401 KGTEENLNQEKIGLAEAEPAAVSEMPKSWRSSSLGKSLTNIKIPKRGELFQRSENGNLAA 460

Query: 491 KKGNKLNSQESQLAEGYETDSLDGEEDKDYMVSKRKLFGGEREDKEYTSLQELIPRRFIS 312
             G   +S ES L  GYE++  +   ++DYM  KR L   E E     + +E I RR  S
Sbjct: 461 GPGCGNDSAESPLG-GYESEEEETTVEQDYMPPKRSLVEEEEEHDIKATPKESILRRINS 519

Query: 311 EKGMVSYQLGKQLSRNWATGAGPRIGCVRDKPSNFQLRLLNQVSL 177
           +KGM  YQLG+QLS  W TGAGPRI CVRD PS  Q+R L  V+L
Sbjct: 520 QKGMELYQLGRQLSCKWTTGAGPRISCVRDHPSKLQVRALEHVNL 564


>ref|XP_002309279.1| predicted protein [Populus trichocarpa] gi|222855255|gb|EEE92802.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 2/107 (1%)
 Frame = -1

Query: 491 KKGNKLNSQESQLAEGYETDSLDGEEDKDYMVSKRKLFG--GEREDKEYTSLQELIPRRF 318
           K+ +     +S   +GYET       ++D+M++K  LF    E E+ E    +E I +R 
Sbjct: 311 KRDSNAEDPDSPGEDGYETAEDSFLTEEDFMITKLNLFDKDDEEEEDEEPVPKEKILKRI 370

Query: 317 ISEKGMVSYQLGKQLSRNWATGAGPRIGCVRDKPSNFQLRLLNQVSL 177
            S KGM SYQL + LS  W TGAGPRIGC+RD PS  Q R+L   +L
Sbjct: 371 DSHKGMKSYQLAEHLSSKWTTGAGPRIGCMRDYPSELQFRVLEHANL 417


>ref|XP_004168936.1| PREDICTED: uncharacterized protein LOC101227697 [Cucumis sativus]
          Length = 637

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
 Frame = -1

Query: 464 ESQLAEGYETDSLDGEEDKDYMVSKRKLFGGEREDKEYTSL-QELIPRRFISEKGMVSYQ 288
           +S   +GYET       ++++MV K  LF  + E+ +   + +E I RR +S K M SYQ
Sbjct: 485 DSPSDDGYETAEELFLSEEEFMVPKSNLFDEDEEENDEQPIPKENILRRIVSHKEMKSYQ 544

Query: 287 LGKQLSRNWATGAGPRIGCVRDKPSNFQLRLLNQVSL 177
           L KQLS  W TGAGPRIGC+RD P   Q ++L Q  L
Sbjct: 545 LAKQLSSRWTTGAGPRIGCMRDYPQELQNKVLEQAHL 581


>ref|XP_004136726.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101221827 [Cucumis sativus]
          Length = 637

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
 Frame = -1

Query: 464 ESQLAEGYETDSLDGEEDKDYMVSKRKLFGGEREDKEYTSL-QELIPRRFISEKGMVSYQ 288
           +S   +GYET       ++++MV K  LF  + E+ +   + +E I RR +S K M SYQ
Sbjct: 485 DSPSDDGYETAEELFLSEEEFMVPKSNLFDEDEEENDEQPIPKENILRRIVSHKEMKSYQ 544

Query: 287 LGKQLSRNWATGAGPRIGCVRDKPSNFQLRLLNQVSL 177
           L KQLS  W TGAGPRIGC+RD P   Q ++L Q  L
Sbjct: 545 LAKQLSSRWTTGAGPRIGCMRDYPQELQNKVLEQAHL 581


>ref|XP_003573908.1| PREDICTED: uncharacterized protein LOC100845210 [Brachypodium
           distachyon]
          Length = 634

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 50/103 (48%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
 Frame = -1

Query: 473 NSQESQLAEGYETDSLDGEEDKDYMVSKRKLFGGEREDKEYTSL----QELIPRRFISEK 306
           N + S  A+    DS    E  D+   K+ LF    E++E   L    +ELI RR  S+K
Sbjct: 482 NRRTSPDAKDINEDSAMFSECLDFC--KKNLFAEVEEEEEAGELVEVPEELILRRITSKK 539

Query: 305 GMVSYQLGKQLSRNWATGAGPRIGCVRDKPSNFQLRLLNQVSL 177
           GM S QLGKQLS  W+TGAGPRIGCVRD P   Q R L +VSL
Sbjct: 540 GMRSCQLGKQLSFQWSTGAGPRIGCVRDYPPELQFRALEEVSL 582


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