BLASTX nr result
ID: Coptis24_contig00019619
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019619 (361 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containi... 158 4e-37 ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containi... 158 4e-37 ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containi... 157 8e-37 emb|CBI18522.3| unnamed protein product [Vitis vinifera] 157 8e-37 emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera] 157 8e-37 >ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like [Cucumis sativus] Length = 1061 Score = 158 bits (400), Expect = 4e-37 Identities = 75/120 (62%), Positives = 92/120 (76%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK+GKLEEAF LF+ V+ L ++VDE Y+TLIDG CR+GDFDRVF LL+EME Sbjct: 338 CKKGKLEEAFSLFEMVKGLEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSI 397 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361 TYNTVINGLCK GRTSEA +S + GD T++TLLHGY+QE N+ GI ETKRR+E++G Sbjct: 398 VTYNTVINGLCKWGRTSEADRLSKGLHGDVITYSTLLHGYIQEQNITGIFETKRRLEDAG 457 Score = 67.0 bits (162), Expect = 1e-09 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 C + +L +AF LF +E LG+ EITY TLID LCR G + L E M Sbjct: 757 CLQSRLIQAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNT 816 Query: 182 XTYNTVINGLCKVGRTSEA----SEISNSIFG-DNFTFTTLLHGYVQENNLVGIL 331 YN++I+G ++G+ EA E+ F D F+ ++ + Y Q+ ++ G L Sbjct: 817 HIYNSLIDGYIRIGQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGAL 871 >ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like [Cucumis sativus] Length = 1085 Score = 158 bits (400), Expect = 4e-37 Identities = 75/120 (62%), Positives = 92/120 (76%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK+GKLEEAF LF+ V+ L ++VDE Y+TLIDG CR+GDFDRVF LL+EME Sbjct: 338 CKKGKLEEAFSLFEMVKGLEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSI 397 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361 TYNTVINGLCK GRTSEA +S + GD T++TLLHGY+QE N+ GI ETKRR+E++G Sbjct: 398 VTYNTVINGLCKWGRTSEADRLSKGLHGDVITYSTLLHGYIQEQNITGIFETKRRLEDAG 457 Score = 67.0 bits (162), Expect = 1e-09 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 C + +L +AF LF +E LG+ EITY TLID LCR G + L E M Sbjct: 781 CLQSRLIQAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNT 840 Query: 182 XTYNTVINGLCKVGRTSEA----SEISNSIFG-DNFTFTTLLHGYVQENNLVGIL 331 YN++I+G ++G+ EA E+ F D F+ ++ + Y Q+ ++ G L Sbjct: 841 HIYNSLIDGYIRIGQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGAL 895 >ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250, mitochondrial-like [Vitis vinifera] Length = 993 Score = 157 bits (397), Expect = 8e-37 Identities = 76/120 (63%), Positives = 90/120 (75%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK+GKL+EA+ LF+ VE LGI+VDE Y TLIDG C RGD D VF LLE+ME Sbjct: 239 CKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSI 298 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361 TYN++INGLCK GRTSEA E+S I GD TF+TLLHGY++E N+ GILETKRR+EE G Sbjct: 299 VTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDG 358 Score = 72.4 bits (176), Expect = 4e-11 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 C++G L +AF LF +E++ + EITY+TLID LC+ G L E+M Sbjct: 685 CRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNV 744 Query: 182 XTYNTVINGLCKVGRTSEASEI-----SNSIFGDNFTFTTLLHGYVQENNLVGIL 331 YN++I+G CK G EA + + I D FT + L++GY + ++ G L Sbjct: 745 RVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGAL 799 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK G L++A L V++ GI ++ Y+++I+GLCR+G + F L + +E Sbjct: 650 CKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSE 709 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNF-----TFTTLLHGYVQENNL 319 TY T+I+ LCK G +A ++ + F + +L+ GY + N+ Sbjct: 710 ITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNM 760 Score = 55.8 bits (133), Expect = 3e-06 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%) Frame = +2 Query: 5 KRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXXX 184 + G L EA + + E GI D ++Y+ LIDG R G ++ LE+M+ Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229 Query: 185 TYNTVINGLCKVGRTSEASEISNSIFG-----DNFTFTTLLHGYVQENNL---VGILE 334 TY ++ G CK G+ EA + + D F + TL+ G+ ++ G+LE Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287 >emb|CBI18522.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 157 bits (397), Expect = 8e-37 Identities = 76/120 (63%), Positives = 90/120 (75%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK+GKL+EA+ LF+ VE LGI+VDE Y TLIDG C RGD D VF LLE+ME Sbjct: 239 CKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSI 298 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361 TYN++INGLCK GRTSEA E+S I GD TF+TLLHGY++E N+ GILETKRR+EE G Sbjct: 299 VTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDG 358 Score = 72.4 bits (176), Expect = 4e-11 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 5/115 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 C++G L +AF LF +E++ + EITY+TLID LC+ G L E+M Sbjct: 540 CRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNV 599 Query: 182 XTYNTVINGLCKVGRTSEASEI-----SNSIFGDNFTFTTLLHGYVQENNLVGIL 331 YN++I+G CK G EA + + I D FT + L++GY + ++ G L Sbjct: 600 RVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGAL 654 Score = 60.1 bits (144), Expect = 2e-07 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK G L++A L V++ GI ++ Y+++I+GLCR+G + F L + +E Sbjct: 505 CKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSE 564 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNF-----TFTTLLHGYVQENNL 319 TY T+I+ LCK G +A ++ + F + +L+ GY + N+ Sbjct: 565 ITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNM 615 Score = 55.8 bits (133), Expect = 3e-06 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%) Frame = +2 Query: 5 KRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXXX 184 + G L EA + + E GI D ++Y+ LIDG R G ++ LE+M+ Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229 Query: 185 TYNTVINGLCKVGRTSEASEISNSIFG-----DNFTFTTLLHGYVQENNL---VGILE 334 TY ++ G CK G+ EA + + D F + TL+ G+ ++ G+LE Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287 >emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera] Length = 993 Score = 157 bits (397), Expect = 8e-37 Identities = 76/120 (63%), Positives = 90/120 (75%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK+GKL+EA+ LF+ VE LGI+VDE Y TLIDG C RGD D VF LLE+ME Sbjct: 239 CKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSI 298 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361 TYN++INGLCK GRTSEA E+S I GD TF+TLLHGY++E N+ GILETKRR+EE G Sbjct: 299 VTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDG 358 Score = 72.4 bits (176), Expect = 4e-11 Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 5/115 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 C++G L +AF LF +E++ + EITY+TLID LC+ G L E+M Sbjct: 685 CRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNV 744 Query: 182 XTYNTVINGLCKVGRTSEASEI-----SNSIFGDNFTFTTLLHGYVQENNLVGIL 331 YN++I+G CK G EA + + I D FT + L++GY + ++ G L Sbjct: 745 RVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGAL 799 Score = 61.2 bits (147), Expect = 8e-08 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%) Frame = +2 Query: 2 CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181 CK G L++A L V++ GI ++ Y+++I+GLCR+G + F L + +E Sbjct: 650 CKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSE 709 Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNF-----TFTTLLHGYVQENNL 319 TY T+I+ LCK G +A ++ + F + +L+ GY + N+ Sbjct: 710 ITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNM 760 Score = 55.8 bits (133), Expect = 3e-06 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%) Frame = +2 Query: 5 KRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXXX 184 + G L EA + + E GI D ++Y+ LIDG R G ++ LE+M+ Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229 Query: 185 TYNTVINGLCKVGRTSEASEISNSIFG-----DNFTFTTLLHGYVQENNL---VGILE 334 TY ++ G CK G+ EA + + D F + TL+ G+ ++ G+LE Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287