BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019619
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containi...   157   8e-37
emb|CBI18522.3| unnamed protein product [Vitis vinifera]              157   8e-37
emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]   157   8e-37

>ref|XP_004163031.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Cucumis sativus]
          Length = 1061

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/120 (62%), Positives = 92/120 (76%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK+GKLEEAF LF+ V+ L ++VDE  Y+TLIDG CR+GDFDRVF LL+EME        
Sbjct: 338 CKKGKLEEAFSLFEMVKGLEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSI 397

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361
            TYNTVINGLCK GRTSEA  +S  + GD  T++TLLHGY+QE N+ GI ETKRR+E++G
Sbjct: 398 VTYNTVINGLCKWGRTSEADRLSKGLHGDVITYSTLLHGYIQEQNITGIFETKRRLEDAG 457



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = +2

Query: 2    CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
            C + +L +AF LF  +E LG+   EITY TLID LCR G  +    L E M         
Sbjct: 757  CLQSRLIQAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNT 816

Query: 182  XTYNTVINGLCKVGRTSEA----SEISNSIFG-DNFTFTTLLHGYVQENNLVGIL 331
              YN++I+G  ++G+  EA     E+    F  D F+ ++ +  Y Q+ ++ G L
Sbjct: 817  HIYNSLIDGYIRIGQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGAL 871


>ref|XP_004148334.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Cucumis sativus]
          Length = 1085

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/120 (62%), Positives = 92/120 (76%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK+GKLEEAF LF+ V+ L ++VDE  Y+TLIDG CR+GDFDRVF LL+EME        
Sbjct: 338 CKKGKLEEAFSLFEMVKGLEMEVDEFMYATLIDGCCRKGDFDRVFGLLDEMETRGMKSSI 397

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361
            TYNTVINGLCK GRTSEA  +S  + GD  T++TLLHGY+QE N+ GI ETKRR+E++G
Sbjct: 398 VTYNTVINGLCKWGRTSEADRLSKGLHGDVITYSTLLHGYIQEQNITGIFETKRRLEDAG 457



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = +2

Query: 2    CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
            C + +L +AF LF  +E LG+   EITY TLID LCR G  +    L E M         
Sbjct: 781  CLQSRLIQAFQLFDSLERLGLIPTEITYGTLIDSLCREGYLEDARQLFERMIPKGLKPNT 840

Query: 182  XTYNTVINGLCKVGRTSEA----SEISNSIFG-DNFTFTTLLHGYVQENNLVGIL 331
              YN++I+G  ++G+  EA     E+    F  D F+ ++ +  Y Q+ ++ G L
Sbjct: 841  HIYNSLIDGYIRIGQIEEAFKLLHELRTGAFNPDEFSVSSAIKAYCQKGDMEGAL 895


>ref|XP_003634559.1| PREDICTED: pentatricopeptide repeat-containing protein At5g57250,
           mitochondrial-like [Vitis vinifera]
          Length = 993

 Score =  157 bits (397), Expect = 8e-37
 Identities = 76/120 (63%), Positives = 90/120 (75%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK+GKL+EA+ LF+ VE LGI+VDE  Y TLIDG C RGD D VF LLE+ME        
Sbjct: 239 CKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSI 298

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361
            TYN++INGLCK GRTSEA E+S  I GD  TF+TLLHGY++E N+ GILETKRR+EE G
Sbjct: 299 VTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDG 358



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
 Frame = +2

Query: 2    CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
            C++G L +AF LF  +E++ +   EITY+TLID LC+ G       L E+M         
Sbjct: 685  CRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNV 744

Query: 182  XTYNTVINGLCKVGRTSEASEI-----SNSIFGDNFTFTTLLHGYVQENNLVGIL 331
              YN++I+G CK G   EA  +     +  I  D FT + L++GY  + ++ G L
Sbjct: 745  RVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGAL 799



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK G L++A  L   V++ GI ++   Y+++I+GLCR+G   + F L + +E        
Sbjct: 650 CKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSE 709

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNF-----TFTTLLHGYVQENNL 319
            TY T+I+ LCK G   +A ++   +    F      + +L+ GY +  N+
Sbjct: 710 ITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNM 760



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
 Frame = +2

Query: 5   KRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXXX 184
           + G L EA    + + E GI  D ++Y+ LIDG  R G  ++    LE+M+         
Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229

Query: 185 TYNTVINGLCKVGRTSEASEISNSIFG-----DNFTFTTLLHGYVQENNL---VGILE 334
           TY  ++ G CK G+  EA  +   +       D F + TL+ G+    ++    G+LE
Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287


>emb|CBI18522.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  157 bits (397), Expect = 8e-37
 Identities = 76/120 (63%), Positives = 90/120 (75%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK+GKL+EA+ LF+ VE LGI+VDE  Y TLIDG C RGD D VF LLE+ME        
Sbjct: 239 CKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSI 298

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361
            TYN++INGLCK GRTSEA E+S  I GD  TF+TLLHGY++E N+ GILETKRR+EE G
Sbjct: 299 VTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDG 358



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/115 (34%), Positives = 61/115 (53%), Gaps = 5/115 (4%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           C++G L +AF LF  +E++ +   EITY+TLID LC+ G       L E+M         
Sbjct: 540 CRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNV 599

Query: 182 XTYNTVINGLCKVGRTSEASEI-----SNSIFGDNFTFTTLLHGYVQENNLVGIL 331
             YN++I+G CK G   EA  +     +  I  D FT + L++GY  + ++ G L
Sbjct: 600 RVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGAL 654



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK G L++A  L   V++ GI ++   Y+++I+GLCR+G   + F L + +E        
Sbjct: 505 CKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSE 564

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNF-----TFTTLLHGYVQENNL 319
            TY T+I+ LCK G   +A ++   +    F      + +L+ GY +  N+
Sbjct: 565 ITYATLIDSLCKEGCLLDAKQLFEKMVIKGFNPNVRVYNSLIDGYCKFGNM 615



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
 Frame = +2

Query: 5   KRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXXX 184
           + G L EA    + + E GI  D ++Y+ LIDG  R G  ++    LE+M+         
Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229

Query: 185 TYNTVINGLCKVGRTSEASEISNSIFG-----DNFTFTTLLHGYVQENNL---VGILE 334
           TY  ++ G CK G+  EA  +   +       D F + TL+ G+    ++    G+LE
Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287


>emb|CAN75781.1| hypothetical protein VITISV_012425 [Vitis vinifera]
          Length = 993

 Score =  157 bits (397), Expect = 8e-37
 Identities = 76/120 (63%), Positives = 90/120 (75%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK+GKL+EA+ LF+ VE LGI+VDE  Y TLIDG C RGD D VF LLE+ME        
Sbjct: 239 CKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLEDMEKRGISPSI 298

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNFTFTTLLHGYVQENNLVGILETKRRVEESG 361
            TYN++INGLCK GRTSEA E+S  I GD  TF+TLLHGY++E N+ GILETKRR+EE G
Sbjct: 299 VTYNSIINGLCKAGRTSEADEVSKGIAGDAVTFSTLLHGYIEEENVKGILETKRRLEEDG 358



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
 Frame = +2

Query: 2    CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
            C++G L +AF LF  +E++ +   EITY+TLID LC+ G       L E+M         
Sbjct: 685  CRQGCLVQAFRLFDSLEKIDLVPSEITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNV 744

Query: 182  XTYNTVINGLCKVGRTSEASEI-----SNSIFGDNFTFTTLLHGYVQENNLVGIL 331
              YN++I+G CK G   EA  +     +  I  D FT + L++GY  + ++ G L
Sbjct: 745  RVYNSLIDGYCKFGNMEEALNLLIDLKARCIKPDEFTVSALINGYCHKGDMEGAL 799



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
 Frame = +2

Query: 2   CKRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXX 181
           CK G L++A  L   V++ GI ++   Y+++I+GLCR+G   + F L + +E        
Sbjct: 650 CKEGHLDKALDLCAFVKKKGIALNIYAYNSVINGLCRQGCLVQAFRLFDSLEKIDLVPSE 709

Query: 182 XTYNTVINGLCKVGRTSEASEISNSIFGDNF-----TFTTLLHGYVQENNL 319
            TY T+I+ LCK G   +A ++   +    F      + +L+ GY +  N+
Sbjct: 710 ITYATLIDSLCKEGCLLDAKQLFEKMVXKGFNPNVRVYNSLIDGYCKFGNM 760



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
 Frame = +2

Query: 5   KRGKLEEAFGLFQRVEELGIQVDEITYSTLIDGLCRRGDFDRVFLLLEEMEXXXXXXXXX 184
           + G L EA    + + E GI  D ++Y+ LIDG  R G  ++    LE+M+         
Sbjct: 170 REGVLVEAIRKHKEMIEKGIAPDTVSYTILIDGFSREGYVEKAIGFLEKMKKDGLKPNLV 229

Query: 185 TYNTVINGLCKVGRTSEASEISNSIFG-----DNFTFTTLLHGYVQENNL---VGILE 334
           TY  ++ G CK G+  EA  +   +       D F + TL+ G+    ++    G+LE
Sbjct: 230 TYTAIMLGFCKKGKLDEAYTLFKMVENLGIEVDEFMYVTLIDGFCTRGDIDCVFGLLE 287