BLASTX nr result

ID: Coptis24_contig00019616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019616
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...    74   1e-11
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...    74   1e-11
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    73   2e-11
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    73   3e-11

>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +2

Query: 5   IATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLIALTIFVF 184
           +  KL VDL TSMPS++DQL+KL+ T F+C  M   +PSLG+   ++   NL+AL I V 
Sbjct: 71  VGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVI 130

Query: 185 TVAVNICMQLHT 220
           T  VNIC+QL T
Sbjct: 131 TDVVNICIQLGT 142


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = +2

Query: 5   IATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLIALTIFVF 184
           +  KL VDL TSMPS++DQL+KL+ T F+C  M   +PSLG+   ++   NL+AL I V 
Sbjct: 71  VGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGIMDNNDLLMNLMALGILVI 130

Query: 185 TVAVNICMQLHT 220
           T  VNIC+QL T
Sbjct: 131 TDVVNICIQLGT 142


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/72 (50%), Positives = 48/72 (66%)
 Frame = +2

Query: 5   IATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLIALTIFVF 184
           +ATKL VDL TSMP  +DQLSKL+ T  +C  M   +PS+G     E  +N+IAL I V 
Sbjct: 71  VATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVI 130

Query: 185 TVAVNICMQLHT 220
           T+ VN+C+Q+ T
Sbjct: 131 TLMVNVCIQMGT 142


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/72 (50%), Positives = 48/72 (66%)
 Frame = +2

Query: 5   IATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLIALTIFVF 184
           +ATKL VDL TSMP  +DQLSKL+ T  +C  M   +PS+G     E  +N+IAL I V 
Sbjct: 71  VATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSIGTMENKEVFSNVIALGILVI 130

Query: 185 TVAVNICMQLHT 220
           T+ VN+C+Q+ T
Sbjct: 131 TLMVNVCIQMGT 142


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 36/72 (50%), Positives = 48/72 (66%)
 Frame = +2

Query: 5   IATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGVSSASECSTNLIALTIFVF 184
           +ATKL VDL TSMP  +DQLSKL+ T  +C  M   +PS+G     E  +N+IAL I V 
Sbjct: 71  VATKLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIGTMENKEVFSNVIALGILVI 130

Query: 185 TVAVNICMQLHT 220
           T+ VN+C+Q+ T
Sbjct: 131 TLMVNVCIQMGT 142


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