BLASTX nr result

ID: Coptis24_contig00019614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019614
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325046.1| AP2 domain-containing transcription factor [...   259   1e-66
ref|XP_002329654.1| AP2 domain-containing transcription factor [...   249   6e-64
gb|ABK93482.1| unknown [Populus trichocarpa]                          249   6e-64
ref|XP_002531028.1| transcription factor, putative [Ricinus comm...   227   3e-57
ref|XP_003541472.1| PREDICTED: AP2-like ethylene-responsive tran...   223   8e-56

>ref|XP_002325046.1| AP2 domain-containing transcription factor [Populus trichocarpa]
            gi|222866480|gb|EEF03611.1| AP2 domain-containing
            transcription factor [Populus trichocarpa]
          Length = 540

 Score =  259 bits (661), Expect = 1e-66
 Identities = 155/279 (55%), Positives = 182/279 (65%), Gaps = 20/279 (7%)
 Frame = -1

Query: 1041 GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXAYDIAAIKFRGLNAVTN 862
            GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ     AYDIAAIKFRGLNAVTN
Sbjct: 265  GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 324

Query: 861  FDMSRYDVKSIASSSLPIGGVSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXSFASQP 691
            FDMSRYDVKSIA+S+LPIGG+S K K SS+                        +FASQP
Sbjct: 325  FDMSRYDVKSIANSNLPIGGISGKSKNSSESVSDSKSIDVSRSDDRDLSSASSVTFASQP 384

Query: 690  SLSTTTLSFALPIKQDPIDYW-SLLGYXXXXXXXXXXXNS------TTLFQSCLTNGFGF 532
              +T+TLSFA+PIKQDP DYW ++LGY           NS      +TL QS  T+   F
Sbjct: 385  --TTSTLSFAMPIKQDPSDYWTNILGYQNSTTTMNNTKNSSSIVAPSTLLQSS-TSFHAF 441

Query: 531  QSVSNPQMDYSTNSDINQSSNR-VLNDGGYIQQQ---------QSTTSIPFATPIXXXXX 382
            Q  +   MD++TNS +N+S+N  +L +GGYIQQQ          S++SIPFATPI     
Sbjct: 442  QGPTAFSMDFNTNSSVNESNNSGLLFNGGYIQQQSGGDGISTSSSSSSIPFATPIALHGN 501

Query: 381  XXXXXXXXXXXSWVSPSVHAFQTGKQNLSVYQTPIYGME 265
                       SW+S S+H+FQ+ K NLSVYQTPI+GME
Sbjct: 502  GSSYEGNSSYGSWISQSLHSFQSAKPNLSVYQTPIFGME 540


>ref|XP_002329654.1| AP2 domain-containing transcription factor [Populus trichocarpa]
            gi|222870535|gb|EEF07666.1| AP2 domain-containing
            transcription factor [Populus trichocarpa]
          Length = 542

 Score =  249 bits (637), Expect = 6e-64
 Identities = 148/277 (53%), Positives = 181/277 (65%), Gaps = 18/277 (6%)
 Frame = -1

Query: 1041 GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXAYDIAAIKFRGLNAVTN 862
            GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ     AYDIAAIKFRGLNAVTN
Sbjct: 269  GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 328

Query: 861  FDMSRYDVKSIASSSLPIGGVSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXSFASQP 691
            FDMSRYDVK+IA+S+LPIGG+S K K SS+                        +FASQP
Sbjct: 329  FDMSRYDVKNIANSNLPIGGISGKSKNSSESASDSKSIDGSRSDDRDLSSASSVTFASQP 388

Query: 690  SLSTTTLSFALPIKQDPIDYW-SLLGYXXXXXXXXXXXNS------TTLFQSCLTNGFGF 532
              +T+TLSFA+PIKQDP DYW ++LGY           +S      +TL QS  T+G  F
Sbjct: 389  --ATSTLSFAIPIKQDPSDYWTNILGYQNTTTMNNAKNSSSSIVDPSTLLQSS-TSGPAF 445

Query: 531  QSVSNPQMDYSTNSDINQSSNR-VLNDGGYIQQQQS-------TTSIPFATPIXXXXXXX 376
            QS +  +MD++ NS +N+S+N  +L +GGY QQQ S       +++IPFATPI       
Sbjct: 446  QSPTVFKMDFNANSSVNESNNNGLLFNGGYTQQQISGIGTSSPSSNIPFATPIAFHSNGN 505

Query: 375  XXXXXXXXXSWVSPSVHAFQTGKQNLSVYQTPIYGME 265
                     SW++  +H+FQ+ K  LSVYQTPI+G+E
Sbjct: 506  SYEGNPSYSSWIAQPLHSFQSAKPKLSVYQTPIFGIE 542


>gb|ABK93482.1| unknown [Populus trichocarpa]
          Length = 545

 Score =  249 bits (637), Expect = 6e-64
 Identities = 148/277 (53%), Positives = 181/277 (65%), Gaps = 18/277 (6%)
 Frame = -1

Query: 1041 GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXAYDIAAIKFRGLNAVTN 862
            GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ     AYDIAAIKFRGLNAVTN
Sbjct: 272  GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 331

Query: 861  FDMSRYDVKSIASSSLPIGGVSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXSFASQP 691
            FDMSRYDVK+IA+S+LPIGG+S K K SS+                        +FASQP
Sbjct: 332  FDMSRYDVKNIANSNLPIGGISGKSKNSSESASDSKSIDGSRSDDRDLSSASSVTFASQP 391

Query: 690  SLSTTTLSFALPIKQDPIDYW-SLLGYXXXXXXXXXXXNS------TTLFQSCLTNGFGF 532
              +T+TLSFA+PIKQDP DYW ++LGY           +S      +TL QS  T+G  F
Sbjct: 392  --ATSTLSFAIPIKQDPSDYWTNILGYQNTTTMNNAKNSSSSIVDPSTLLQSS-TSGPAF 448

Query: 531  QSVSNPQMDYSTNSDINQSSNR-VLNDGGYIQQQQS-------TTSIPFATPIXXXXXXX 376
            QS +  +MD++ NS +N+S+N  +L +GGY QQQ S       +++IPFATPI       
Sbjct: 449  QSPTVFKMDFNANSSVNESNNNGLLFNGGYTQQQISGIGTSSPSSNIPFATPIAFHSNGN 508

Query: 375  XXXXXXXXXSWVSPSVHAFQTGKQNLSVYQTPIYGME 265
                     SW++  +H+FQ+ K  LSVYQTPI+G+E
Sbjct: 509  SYEGNPSYSSWIAQPLHSFQSAKPKLSVYQTPIFGIE 545


>ref|XP_002531028.1| transcription factor, putative [Ricinus communis]
            gi|223529381|gb|EEF31345.1| transcription factor,
            putative [Ricinus communis]
          Length = 385

 Score =  227 bits (579), Expect = 3e-57
 Identities = 142/308 (46%), Positives = 175/308 (56%), Gaps = 49/308 (15%)
 Frame = -1

Query: 1041 GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXAYDIAAIKFRGLNAVTN 862
            GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ     AYDIAAIKFRGLNAVTN
Sbjct: 78   GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 137

Query: 861  FDMSRYDVKSIASSSLPIGGVSSKPKASSD------QXXXXXXXXXXXXXXXXXXXXSFA 700
            FDMSRYDVKSIA+S+LPIGG+S KPK S D                           +FA
Sbjct: 138  FDMSRYDVKSIANSNLPIGGISGKPKNSQDSASDSKSIDGGCRSDDRDLSSASSPVVTFA 197

Query: 699  S-QPSLSTTTLSFALPIKQDPIDYWS-LLG-----------YXXXXXXXXXXXNSTTLFQ 559
            S QP+ +T+ L+F +PIKQDP DYWS +LG                        +TTL Q
Sbjct: 198  SHQPTTTTSALNFVMPIKQDPSDYWSNILGCHNPTAAATTSSTTLNSAKNTNATTTTLAQ 257

Query: 558  SCL---------TNGFGFQ--SVSNPQMDYSTNSDINQSSNRVLNDGGYIQQQ------- 433
            S L         T  FG    +VS+  ++ S N++ N ++N +L +GGY   Q       
Sbjct: 258  SILFPSAAAFPSTTAFGMDLINVSSSSVNESNNNNNNNNNNVLLYNGGYNLHQHGEGGGG 317

Query: 432  ------------QSTTSIPFATPIXXXXXXXXXXXXXXXXSWVSPSVHAFQTGKQNLSVY 289
                         +++SIPFATP+                SW++ S+H+ Q+ K NLS++
Sbjct: 318  GGGGGGISSGSTSTSSSIPFATPVALNSTGSNYDGNSSYGSWIAQSLHSLQSAKPNLSMF 377

Query: 288  QTPIYGME 265
            QTPI+GME
Sbjct: 378  QTPIFGME 385


>ref|XP_003541472.1| PREDICTED: AP2-like ethylene-responsive transcription factor
            AIL5-like [Glycine max]
          Length = 528

 Score =  223 bits (567), Expect = 8e-56
 Identities = 136/284 (47%), Positives = 166/284 (58%), Gaps = 25/284 (8%)
 Frame = -1

Query: 1041 GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQXXXXXAYDIAAIKFRGLNAVTN 862
            GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQ     AYDIAAIKFRGLNAVTN
Sbjct: 246  GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 305

Query: 861  FDMSRYDVKSIASSSLPIGGVSSKPKASSD---QXXXXXXXXXXXXXXXXXXXXSFASQP 691
            FDMSRYDVKSIA+S+LPIGG+S K K S+D   +                    +FASQ 
Sbjct: 306  FDMSRYDVKSIANSTLPIGGLSGKNKNSTDSASESKSHEASRSDERDPSAASSVTFASQQ 365

Query: 690  SLSTTTLSFALPIKQDPIDYWSLLGYXXXXXXXXXXXNSTTLFQSCL--TNGFGFQSVSN 517
              S++TLSFA+PIKQDP DYWS+LGY           N+T++  +    +N     S++ 
Sbjct: 366  QPSSSTLSFAIPIKQDPSDYWSILGYHNSPLDNTGIRNTTSVTATSFPSSNNGTTSSLTP 425

Query: 516  PQMDYSTNSDINQSSN--RVLNDGGYIQQQQS------------------TTSIPFATPI 397
              M++S       S N     + GG   QQQS                  + SIPFATPI
Sbjct: 426  FHMEFSNAPTSTGSDNDAAFFSGGGIFVQQQSGHGNGHGSGSSGSSSSSLSCSIPFATPI 485

Query: 396  XXXXXXXXXXXXXXXXSWVSPSVHAFQTGKQNLSVYQTPIYGME 265
                            +W+ P++H FQ+  +  S++QTPI+GME
Sbjct: 486  FSLNSNTSYENSAGYGNWIGPTLHTFQSHAKP-SLFQTPIFGME 528


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