BLASTX nr result

ID: Coptis24_contig00019611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019611
         (613 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279760.1| PREDICTED: ethylene-responsive transcription...    69   9e-10
gb|ADJ67437.1| ethylene response factor 8 [Actinidia deliciosa]        62   3e-09
gb|AFK48691.1| unknown [Lotus japonicus]                               58   3e-08
ref|XP_002509444.1| Ethylene-responsive transcription factor, pu...    63   5e-08
ref|XP_002305780.1| AP2/ERF domain-containing transcription fact...    63   5e-08

>ref|XP_002279760.1| PREDICTED: ethylene-responsive transcription factor 12-like [Vitis
           vinifera]
          Length = 152

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 36/56 (64%), Positives = 41/56 (73%)
 Frame = +2

Query: 2   TFDTPEEAALAYDGAARSLRGPKARTNFXXXXXXXXSTKLSLDLNLSSETWVNANG 169
           TFDTPEEAALAYDGAARSLRG KA+TNF        +T LSLDLN  S+ W + +G
Sbjct: 37  TFDTPEEAALAYDGAARSLRGAKAKTNF-----PAPATALSLDLNAPSDRWSSPSG 87


>gb|ADJ67437.1| ethylene response factor 8 [Actinidia deliciosa]
          Length = 157

 Score = 62.0 bits (149), Expect(3) = 3e-09
 Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
 Frame = +2

Query: 2   TFDTPEEAALAYDGAARSLRGPKARTNFXXXXXXXXSTKLSLDLNLSS-ETWVNANG 169
           TFDTPEEAA+AYDGAARSLRG KA+TNF          +LSLDLNL++ + W +  G
Sbjct: 37  TFDTPEEAAMAYDGAARSLRGAKAKTNFPQPHPL---PELSLDLNLAADQRWASPAG 90



 Score = 22.7 bits (47), Expect(3) = 3e-09
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = +1

Query: 391 LSIDLNEPPP 420
           L+IDLN+PPP
Sbjct: 145 LAIDLNKPPP 154



 Score = 21.6 bits (44), Expect(3) = 3e-09
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +1

Query: 265 LVLGRHEFLHTSVLK 309
           LV+G  EFLHT VLK
Sbjct: 92  LVIG--EFLHTGVLK 104


>gb|AFK48691.1| unknown [Lotus japonicus]
          Length = 167

 Score = 57.8 bits (138), Expect(3) = 3e-08
 Identities = 32/48 (66%), Positives = 34/48 (70%)
 Frame = +2

Query: 2   TFDTPEEAALAYDGAARSLRGPKARTNFXXXXXXXXSTKLSLDLNLSS 145
           TFDTPEEAALAYDGAARSLRG KA+TNF        +  L LDLN  S
Sbjct: 42  TFDTPEEAALAYDGAARSLRGAKAKTNF---PPAPLAAGLCLDLNAPS 86



 Score = 22.7 bits (47), Expect(3) = 3e-08
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 391 LSIDLNEPPP 420
           + IDLNEPPP
Sbjct: 155 IPIDLNEPPP 164



 Score = 22.3 bits (46), Expect(3) = 3e-08
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1

Query: 256 SNGLVLGRHEFLHTSVLK 309
           S GL L   EFLHT VLK
Sbjct: 99  SRGLALS--EFLHTGVLK 114


>ref|XP_002509444.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223549343|gb|EEF50831.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 174

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/49 (69%), Positives = 37/49 (75%)
 Frame = +2

Query: 2   TFDTPEEAALAYDGAARSLRGPKARTNFXXXXXXXXSTKLSLDLNLSSE 148
           TFDTPEEAALAYDGAARSLRG KA+TNF         T LSLDLN+ S+
Sbjct: 44  TFDTPEEAALAYDGAARSLRGAKAKTNF-----PAPPTALSLDLNVPSD 87


>ref|XP_002305780.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222848744|gb|EEE86291.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 176

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = +2

Query: 2   TFDTPEEAALAYDGAARSLRGPKARTNFXXXXXXXXSTKLSLDLNLSSE 148
           TFDTPEEAALAYDGAARSLRG KA+TNF        ++ LSLDLNL S+
Sbjct: 37  TFDTPEEAALAYDGAARSLRGAKAKTNF---PSPPSTSGLSLDLNLPSD 82


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