BLASTX nr result
ID: Coptis24_contig00019603
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00019603
(1078 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002323343.1| predicted protein [Populus trichocarpa] gi|2... 218 2e-54
ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medic... 204 4e-50
emb|CBI20154.3| unnamed protein product [Vitis vinifera] 199 1e-48
ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine... 193 5e-47
ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine... 193 5e-47
>ref|XP_002323343.1| predicted protein [Populus trichocarpa] gi|222867973|gb|EEF05104.1|
predicted protein [Populus trichocarpa]
Length = 401
Score = 218 bits (556), Expect = 2e-54
Identities = 131/306 (42%), Positives = 178/306 (58%), Gaps = 3/306 (0%)
Frame = +1
Query: 22 VDALNEIVSKSAF---RLERLYTNQLCGDRDQKEVRCNCSFDGGTVCHVTKLLIYAKDLS 192
V AL ++S ++ R Y ++ + C+C + T+CH+T + Y +S
Sbjct: 71 VYALRAVISALGLPVPQISRSYCSEKSFYYNSISTTCDCD-NTTTICHITTIATYGISVS 129
Query: 193 GIISPTVGNLTYLEELDLSINLLHGSIPSTLGNLLKLRHLDLSKNQLNGVVPWSLGNLKS 372
G + + L YL+E+DLS N L GSIP+ L NL +L L L +N L+G +P +LG LK+
Sbjct: 130 GHVHEWLSKLIYLKEIDLSQNQLRGSIPN-LVNLTRLTSLILGQNHLSGPIPPTLGKLKA 188
Query: 373 LTHIHLEYNFLEDEMPSXXXXXXXXXXXXXSYNKLNGSIPKELGDLSQLKWLVLEGNQLS 552
L + L+ NFL +P S N L+G IPKELG L L L LE NQLS
Sbjct: 189 LEMLDLQKNFLNGAIPPSLGNLMNLATLSLSNNMLSGQIPKELGTLLNLTSLRLEDNQLS 248
Query: 553 GDLPTELGEAKNLITMRLSGNSITGELPRSFKNLTILEDFRVRGTLLSGKIPDFIADWSN 732
G LP ELG+ L + L+ NS++G LP SF NL L FRV G LSG+IP FIA W+N
Sbjct: 249 GYLPPELGKLSKLEELYLNSNSLSGGLPGSFANLRSLVLFRVAGNKLSGRIPPFIAKWTN 308
Query: 733 LKILRLMGSNFEGPLPSGILALSGLKELWVSDLVITTNFSFPSMSQLTAMTSLILRNCSI 912
L L LMG++FEG LP I + GL+ LW+SDL T FSFP + +T + LI+RNCS+
Sbjct: 309 LTDLYLMGNDFEGELPPEIFNMPGLQSLWISDL-NNTGFSFPKFANMTNINYLIMRNCSL 367
Query: 913 DDKIPE 930
+IP+
Sbjct: 368 RGQIPK 373
>ref|XP_003596262.1| Receptor-like serine/threonine kinase [Medicago truncatula]
gi|355485310|gb|AES66513.1| Receptor-like
serine/threonine kinase [Medicago truncatula]
Length = 1011
Score = 204 bits (518), Expect = 4e-50
Identities = 130/363 (35%), Positives = 179/363 (49%), Gaps = 18/363 (4%)
Frame = +1
Query: 31 LNEIVSKSAFRLERLYTNQLCGDRDQ-------------KEVRCNCSFDGGTVCHVTKLL 171
L + +S L TN+ C D+ + V C+CSF+ TVCHVT +
Sbjct: 39 LLQTISDKVNNLNWKVTNRSCNSGDKGFGNEIIVEDQIVRNVTCDCSFNSSTVCHVTMIF 98
Query: 172 IYAKDLSGIISPTVGNLTYLEELDLSINLLHGSIPSTLGNLLKLRHLDLSKNQLNGVVPW 351
+ ++SGI PS GNL L+ LDL++N +NG +P
Sbjct: 99 LKGLNISGIF------------------------PSEFGNLTHLKTLDLTRNYINGSIPK 134
Query: 352 SLGNLKSLTHIHLEYNFLEDEMPSXXXXXXXXXXXXXSYNKLNGSIPKELGDLSQLKWLV 531
SLG L SL + L N+L+G IP E+GD+S L+ +
Sbjct: 135 SLGGLSSLVTLSL------------------------LGNRLSGPIPSEIGDISTLQEMN 170
Query: 532 LEGNQLSGDLPTELGEAKNLITMRLSGNSITGELPRSFKNLTILEDFRVRGTLLSGKIPD 711
+E NQL G+LP LG KNL + LS N+ TG +P +F NL L +FR+ G+ LSGKIP
Sbjct: 171 VEDNQLEGNLPPNLGNLKNLQKLMLSANNFTGTIPEAFGNLKNLTNFRIDGSSLSGKIPS 230
Query: 712 FIADWSNLKILRLMGSNFEGPLPSGILALSGLKELWVSDLVITTNFSFPSMSQLTAMTSL 891
FI +W+ L+ L L G++ EGP+P + L LKEL +SDL T +FP + L M L
Sbjct: 231 FIGNWTKLERLDLQGTSLEGPIPPAVSVLKNLKELRISDLKGNTTMTFPDLKDLKRMQRL 290
Query: 892 ILRNCSIDDKIPE-XXXXXXXXXXXXXFNKLNGEIP-TFRNLKSL---CLTRNRFNGSIP 1056
LRNC I IP+ N+L G IP + +L+S+ LT N NG+IP
Sbjct: 291 ELRNCLITGPIPDYIGELENLKTIDLSSNRLTGPIPGSLEDLESINFVFLTNNSLNGTIP 350
Query: 1057 NWI 1065
WI
Sbjct: 351 GWI 353
>emb|CBI20154.3| unnamed protein product [Vitis vinifera]
Length = 1181
Score = 199 bits (505), Expect = 1e-48
Identities = 117/324 (36%), Positives = 174/324 (53%), Gaps = 4/324 (1%)
Frame = +1
Query: 115 VRCNCSFDGGTVCHVTKLLIYAKDLSGIISPTVGNLTYLEELDLSINLLHGSIPSTLGNL 294
V C+C+F+ TVCHVT + + +L+GI+ GNLTY
Sbjct: 241 VTCDCTFENSTVCHVTNIQLKGLNLTGIMPDEFGNLTY---------------------- 278
Query: 295 LKLRHLDLSKNQLNGVVPWSLGNLKSLTHIHLEYNFLEDEMPSXXXXXXXXXXXXXSYNK 474
L+ +DL++N LNG +P SL + +T L N+
Sbjct: 279 --LQEIDLTRNYLNGSIPTSLAQIPLVTLSALG-------------------------NR 311
Query: 475 LNGSIPKELGDLSQLKWLVLEGNQLSGDLPTELGEAKNLITMRLSGNSITGELPRSFKNL 654
L+GSIPKE+GD++ L+ LVLE NQL G LP LG +L + L+ N+ TG +P +F NL
Sbjct: 312 LSGSIPKEIGDIATLEELVLEDNQLEGSLPENLGNLSSLSRLLLTANNFTGTIPETFGNL 371
Query: 655 TILEDFRVRGTLLSGKIPDFIADWSNLKILRLMGSNFEGPLPSGILALSGLKELWVSDLV 834
L D R+ G SGKIPDFI +W+ L L + G++ +GP+PS I L+ L +L ++DL
Sbjct: 372 KNLTDVRLDGNAFSGKIPDFIGNWTQLDRLDMQGTSMDGPIPSTISLLTNLTQLRIADL- 430
Query: 835 ITTNFSFPSMSQLTAMTSLILRNCSIDDKIPE-XXXXXXXXXXXXXFNKLNGEIP---TF 1002
++ +FP++ LT M L+LRNCSI D IP+ FN+L+G++ +
Sbjct: 431 NGSSMAFPNLQNLTKMEELVLRNCSITDSIPDYIGKMASLKTLDLSFNRLSGQVSDTWSL 490
Query: 1003 RNLKSLCLTRNRFNGSIPNWIQNS 1074
L+ L LT N +G++P+WI +S
Sbjct: 491 SQLEYLFLTNNSLSGTLPSWISDS 514
>ref|XP_004168262.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
At1g53430-like, partial [Cucumis sativus]
Length = 993
Score = 193 bits (491), Expect = 5e-47
Identities = 130/352 (36%), Positives = 180/352 (51%), Gaps = 7/352 (1%)
Frame = +1
Query: 40 IVSKSAFRLERLYTNQLCGDRDQKEVRCNCSFDGGTVCHVTKLLIYAKDLSGIISPTVGN 219
+ S R E G++ + + CNC+ T+CHVT +L L G+ N
Sbjct: 17 VTRSSCIRGEGFSNQAFQGNQILRNISCNCT---STLCHVTIVL-----LKGL------N 62
Query: 220 LTYLEELDLSINLLHGSIPSTLGNLLKLRHLDLSKNQLNGVVPWSLGNLKSLTHIHLEYN 399
LT G+ P+ GNL L+ LDL++N +NG +P SL N + L
Sbjct: 63 LT-------------GTFPAEFGNLTHLQELDLTRNHINGQLPSSLANAPLVKLSLLG-- 107
Query: 400 FLEDEMPSXXXXXXXXXXXXXSYNKLNGSIPKELGDLSQLKWLVLEGNQLSGDLPTELGE 579
N+LNGSIPKE+G++ L+ L+LE NQL+G LP LG
Sbjct: 108 -----------------------NRLNGSIPKEIGEIGTLEELILEDNQLTGSLPASLGN 144
Query: 580 AKNLITMRLSGNSITGELPRSFKNLTILEDFRVRGTLLSGKIPDFIADWSNLKILRLMGS 759
+L + LS N+ TG++P SF LT L DFRV G LSGKIP+FI +W NL L + G+
Sbjct: 145 LNSLRRLLLSANNFTGKIPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGT 204
Query: 760 NFEGPLPSGILALSGLKELWVSDLVITTNFSFPSMSQLTAMTSLILRNCSIDDKIPE-XX 936
+ E P+PS I L L +L +SDL + SFP+++ + M L+LRNC I+ IPE
Sbjct: 205 SMENPIPSTISQLKNLTQLRISDLK-GSFISFPNLTDMINMKELVLRNCLINGSIPEYIG 263
Query: 937 XXXXXXXXXXXFNKLNGEIP-TFRNLKS-----LCLTRNRFNGSIPNWIQNS 1074
FN LNG+IP TF+NL + LT N +G +P WI +S
Sbjct: 264 EMNKLSTLDLSFNHLNGDIPETFQNLMKRKIDFMFLTNNSLSGEVPGWILSS 315
>ref|XP_004137308.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
At1g53430-like [Cucumis sativus]
Length = 1030
Score = 193 bits (491), Expect = 5e-47
Identities = 130/352 (36%), Positives = 180/352 (51%), Gaps = 7/352 (1%)
Frame = +1
Query: 40 IVSKSAFRLERLYTNQLCGDRDQKEVRCNCSFDGGTVCHVTKLLIYAKDLSGIISPTVGN 219
+ S R E G++ + + CNC+ T+CHVT +L L G+ N
Sbjct: 54 VTRSSCIRGEGFSNQAFQGNQILRNISCNCT---STLCHVTIVL-----LKGL------N 99
Query: 220 LTYLEELDLSINLLHGSIPSTLGNLLKLRHLDLSKNQLNGVVPWSLGNLKSLTHIHLEYN 399
LT G+ P+ GNL L+ LDL++N +NG +P SL N + L
Sbjct: 100 LT-------------GTFPAEFGNLTHLQELDLTRNHINGQLPSSLANAPLVKLSLLG-- 144
Query: 400 FLEDEMPSXXXXXXXXXXXXXSYNKLNGSIPKELGDLSQLKWLVLEGNQLSGDLPTELGE 579
N+LNGSIPKE+G++ L+ L+LE NQL+G LP LG
Sbjct: 145 -----------------------NRLNGSIPKEIGEIGTLEELILEDNQLTGSLPASLGN 181
Query: 580 AKNLITMRLSGNSITGELPRSFKNLTILEDFRVRGTLLSGKIPDFIADWSNLKILRLMGS 759
+L + LS N+ TG++P SF LT L DFRV G LSGKIP+FI +W NL L + G+
Sbjct: 182 LNSLRRLLLSANNFTGKIPDSFGKLTNLVDFRVDGNGLSGKIPEFIGNWINLDRLDMQGT 241
Query: 760 NFEGPLPSGILALSGLKELWVSDLVITTNFSFPSMSQLTAMTSLILRNCSIDDKIPE-XX 936
+ E P+PS I L L +L +SDL + SFP+++ + M L+LRNC I+ IPE
Sbjct: 242 SMENPIPSTISQLKNLTQLRISDLK-GSFISFPNLTDMINMKELVLRNCLINGSIPEYIG 300
Query: 937 XXXXXXXXXXXFNKLNGEIP-TFRNLKS-----LCLTRNRFNGSIPNWIQNS 1074
FN LNG+IP TF+NL + LT N +G +P WI +S
Sbjct: 301 EMNKLSTLDLSFNHLNGDIPETFQNLMKRKIDFMFLTNNSLSGEVPGWILSS 352