BLASTX nr result
ID: Coptis24_contig00019600
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019600 (357 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 102 2e-39 ref|XP_004140587.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 102 2e-39 gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK... 97 4e-39 emb|CCG06553.1| E3 ubiquitin ligase-like protein [Lotus japonicus] 97 1e-38 ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 97 1e-38 >ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SINAT3-like [Cucumis sativus] Length = 304 Score = 102 bits (253), Expect(2) = 2e-39 Identities = 46/54 (85%), Positives = 51/54 (94%) Frame = -2 Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195 QYFCLHFEAFQLGMAPVY+AFLRFMGDET+A+NFSYSL V NG+KLIWEG+PR Sbjct: 202 QYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPR 255 Score = 85.5 bits (210), Expect(2) = 2e-39 Identities = 40/50 (80%), Positives = 44/50 (88%) Frame = -3 Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQQIQ 59 R IRD H+ VRDS+DGLIIQ NMALFFSGG+RKELKLR+TGRIWKEQ Q Sbjct: 255 RSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ 304 >ref|XP_004140587.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis sativus] Length = 304 Score = 102 bits (253), Expect(2) = 2e-39 Identities = 46/54 (85%), Positives = 51/54 (94%) Frame = -2 Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195 QYFCLHFEAFQLGMAPVY+AFLRFMGDET+A+NFSYSL V NG+KLIWEG+PR Sbjct: 202 QYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPR 255 Score = 85.5 bits (210), Expect(2) = 2e-39 Identities = 40/50 (80%), Positives = 44/50 (88%) Frame = -3 Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQQIQ 59 R IRD H+ VRDS+DGLIIQ NMALFFSGG+RKELKLR+TGRIWKEQ Q Sbjct: 255 RSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ 304 >gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK47077.1| unknown [Medicago truncatula] Length = 335 Score = 96.7 bits (239), Expect(2) = 4e-39 Identities = 44/54 (81%), Positives = 49/54 (90%) Frame = -2 Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195 QYFCLHFEAFQLGMAPVY+AF RFMGDE EA+N++YSL V ANG+KLIWEG PR Sbjct: 220 QYFCLHFEAFQLGMAPVYMAFHRFMGDENEARNYTYSLEVGANGRKLIWEGTPR 273 Score = 90.1 bits (222), Expect(2) = 4e-39 Identities = 43/48 (89%), Positives = 45/48 (93%) Frame = -3 Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQQ 65 R IRD+HR VRDS+DGLIIQ NMALFFSGGDRKELKLRVTGRIWKEQQ Sbjct: 273 RSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQ 320 >emb|CCG06553.1| E3 ubiquitin ligase-like protein [Lotus japonicus] Length = 304 Score = 97.1 bits (240), Expect(2) = 1e-38 Identities = 43/54 (79%), Positives = 50/54 (92%) Frame = -2 Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195 QYFCLHFEAFQLGMAPVYIAFLRFMGD++EA+N+SYSL V NG+K+IW+G PR Sbjct: 205 QYFCLHFEAFQLGMAPVYIAFLRFMGDDSEAKNYSYSLEVGGNGRKMIWQGVPR 258 Score = 88.2 bits (217), Expect(2) = 1e-38 Identities = 41/47 (87%), Positives = 44/47 (93%) Frame = -3 Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQ 68 R IRD+HR +RDS+DGLIIQ NMALFFSGGDRKELKLRVTGRIWKEQ Sbjct: 258 RSIRDSHRKIRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 304 >ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Glycine max] Length = 304 Score = 96.7 bits (239), Expect(2) = 1e-38 Identities = 43/54 (79%), Positives = 49/54 (90%) Frame = -2 Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195 QYFCLHFEAFQLGMAPVYIAFLRFMGD+ EA+N+SYSL V NG+K+IW+G PR Sbjct: 205 QYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMIWQGVPR 258 Score = 88.6 bits (218), Expect(2) = 1e-38 Identities = 42/47 (89%), Positives = 44/47 (93%) Frame = -3 Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQ 68 R IRD+HR VRDS+DGLIIQ NMALFFSGGDRKELKLRVTGRIWKEQ Sbjct: 258 RSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 304