BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019600
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin...   102   2e-39
ref|XP_004140587.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   102   2e-39
gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK...    97   4e-39
emb|CCG06553.1| E3 ubiquitin ligase-like protein [Lotus japonicus]     97   1e-38
ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    97   1e-38

>ref|XP_004168590.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
           SINAT3-like [Cucumis sativus]
          Length = 304

 Score =  102 bits (253), Expect(2) = 2e-39
 Identities = 46/54 (85%), Positives = 51/54 (94%)
 Frame = -2

Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195
           QYFCLHFEAFQLGMAPVY+AFLRFMGDET+A+NFSYSL V  NG+KLIWEG+PR
Sbjct: 202 QYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPR 255



 Score = 85.5 bits (210), Expect(2) = 2e-39
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = -3

Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQQIQ 59
           R IRD H+ VRDS+DGLIIQ NMALFFSGG+RKELKLR+TGRIWKEQ  Q
Sbjct: 255 RSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ 304


>ref|XP_004140587.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cucumis
           sativus]
          Length = 304

 Score =  102 bits (253), Expect(2) = 2e-39
 Identities = 46/54 (85%), Positives = 51/54 (94%)
 Frame = -2

Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195
           QYFCLHFEAFQLGMAPVY+AFLRFMGDET+A+NFSYSL V  NG+KLIWEG+PR
Sbjct: 202 QYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNFSYSLEVGGNGRKLIWEGNPR 255



 Score = 85.5 bits (210), Expect(2) = 2e-39
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = -3

Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQQIQ 59
           R IRD H+ VRDS+DGLIIQ NMALFFSGG+RKELKLR+TGRIWKEQ  Q
Sbjct: 255 RSIRDNHKKVRDSHDGLIIQRNMALFFSGGERKELKLRITGRIWKEQNKQ 304


>gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK47077.1| unknown
           [Medicago truncatula]
          Length = 335

 Score = 96.7 bits (239), Expect(2) = 4e-39
 Identities = 44/54 (81%), Positives = 49/54 (90%)
 Frame = -2

Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195
           QYFCLHFEAFQLGMAPVY+AF RFMGDE EA+N++YSL V ANG+KLIWEG PR
Sbjct: 220 QYFCLHFEAFQLGMAPVYMAFHRFMGDENEARNYTYSLEVGANGRKLIWEGTPR 273



 Score = 90.1 bits (222), Expect(2) = 4e-39
 Identities = 43/48 (89%), Positives = 45/48 (93%)
 Frame = -3

Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQQ 65
           R IRD+HR VRDS+DGLIIQ NMALFFSGGDRKELKLRVTGRIWKEQQ
Sbjct: 273 RSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQ 320


>emb|CCG06553.1| E3 ubiquitin ligase-like protein [Lotus japonicus]
          Length = 304

 Score = 97.1 bits (240), Expect(2) = 1e-38
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = -2

Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195
           QYFCLHFEAFQLGMAPVYIAFLRFMGD++EA+N+SYSL V  NG+K+IW+G PR
Sbjct: 205 QYFCLHFEAFQLGMAPVYIAFLRFMGDDSEAKNYSYSLEVGGNGRKMIWQGVPR 258



 Score = 88.2 bits (217), Expect(2) = 1e-38
 Identities = 41/47 (87%), Positives = 44/47 (93%)
 Frame = -3

Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQ 68
           R IRD+HR +RDS+DGLIIQ NMALFFSGGDRKELKLRVTGRIWKEQ
Sbjct: 258 RSIRDSHRKIRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 304


>ref|XP_003546723.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Glycine max]
          Length = 304

 Score = 96.7 bits (239), Expect(2) = 1e-38
 Identities = 43/54 (79%), Positives = 49/54 (90%)
 Frame = -2

Query: 356 QYFCLHFEAFQLGMAPVYIAFLRFMGDETEAQNFSYSLVVVANGQKLIWEGHPR 195
           QYFCLHFEAFQLGMAPVYIAFLRFMGD+ EA+N+SYSL V  NG+K+IW+G PR
Sbjct: 205 QYFCLHFEAFQLGMAPVYIAFLRFMGDDNEAKNYSYSLEVGGNGRKMIWQGVPR 258



 Score = 88.6 bits (218), Expect(2) = 1e-38
 Identities = 42/47 (89%), Positives = 44/47 (93%)
 Frame = -3

Query: 208 RGIRDTHRNVRDSYDGLIIQCNMALFFSGGDRKELKLRVTGRIWKEQ 68
           R IRD+HR VRDS+DGLIIQ NMALFFSGGDRKELKLRVTGRIWKEQ
Sbjct: 258 RSIRDSHRKVRDSFDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 304