BLASTX nr result
ID: Coptis24_contig00019578
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019578 (1106 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004173804.1| PREDICTED: EID1-like F-box protein 3-like [C... 320 4e-85 ref|XP_004140217.1| PREDICTED: EID1-like F-box protein 3-like [C... 318 2e-84 ref|XP_002276328.1| PREDICTED: EID1-like F-box protein 3-like [V... 315 1e-83 ref|XP_002533076.1| conserved hypothetical protein [Ricinus comm... 310 5e-82 gb|AAK56924.1|AF368237_1 circadian clock coupling factor ZGT [Ni... 309 7e-82 >ref|XP_004173804.1| PREDICTED: EID1-like F-box protein 3-like [Cucumis sativus] Length = 313 Score = 320 bits (820), Expect = 4e-85 Identities = 147/224 (65%), Positives = 178/224 (79%) Frame = -1 Query: 1016 SDSSGLQNERILMLVCKSINWDPHLLCLISCVSRKLSAVAKRVLWKELCASRAPRMVPTL 837 SD SG+ NERIL+LV ++I WD LC+ + ++RKL A+A+R+LW+ELC +RAPRM+ L Sbjct: 20 SDDSGIFNERILLLVFRTIKWDLRTLCITASLNRKLRAIAERLLWRELCFNRAPRMLAAL 79 Query: 836 VNGEPNLRVGDGWHALAKLLFFCCGCVPSRHFKIDQTLLGHFSKTSRFSKTSGQSFLMKR 657 G PN RVG GW+ALAKL+FFCCGC SRHFK+ Q L GHF SRFSKTSGQSFL K+ Sbjct: 80 TTGAPNARVGGGWNALAKLMFFCCGCQSSRHFKVAQPLPGHFVHESRFSKTSGQSFLTKK 139 Query: 656 CQSDLLYISDPCEHTVEGSFEDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGA 477 C+ DLLY+SDPCEH+ +DLG++RG+FRGFM+SKTR LI R+ EE RCPYCGA Sbjct: 140 CRGDLLYVSDPCEHSNGRDEDDLGIYRGIFRGFMRSKTRAFLIKREVRLEETTRCPYCGA 199 Query: 476 RVWSMTTAKLVPKSAAKRLGSHHEKLEYFVCVNGHVHGSCLLVP 345 RVWSMTTA+LVPKS A+RLG+H LEYFVCVNGH+HGSC LVP Sbjct: 200 RVWSMTTARLVPKSVARRLGTHDGGLEYFVCVNGHLHGSCWLVP 243 >ref|XP_004140217.1| PREDICTED: EID1-like F-box protein 3-like [Cucumis sativus] Length = 313 Score = 318 bits (815), Expect = 2e-84 Identities = 146/224 (65%), Positives = 178/224 (79%) Frame = -1 Query: 1016 SDSSGLQNERILMLVCKSINWDPHLLCLISCVSRKLSAVAKRVLWKELCASRAPRMVPTL 837 SD SG+ NERIL+LV ++I WD LC+ + ++RKL A+A+R+LW+ELC +RAPRM+ L Sbjct: 20 SDDSGIFNERILLLVFRTIKWDLRTLCITASLNRKLRAIAERLLWRELCFNRAPRMLAAL 79 Query: 836 VNGEPNLRVGDGWHALAKLLFFCCGCVPSRHFKIDQTLLGHFSKTSRFSKTSGQSFLMKR 657 G PN RVG GW+ALAKL+FFCCGC SRHFK+ Q L GHF SRFSKTSGQSFL K+ Sbjct: 80 TTGAPNARVGGGWNALAKLMFFCCGCQSSRHFKVAQPLPGHFVHESRFSKTSGQSFLTKK 139 Query: 656 CQSDLLYISDPCEHTVEGSFEDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGA 477 C+ DLLY+SDPCEH+ ++LG++RG+FRGFM+SKTR LI R+ EE RCPYCGA Sbjct: 140 CRGDLLYVSDPCEHSNGRDEDNLGIYRGIFRGFMRSKTRAFLIKREVRLEETTRCPYCGA 199 Query: 476 RVWSMTTAKLVPKSAAKRLGSHHEKLEYFVCVNGHVHGSCLLVP 345 RVWSMTTA+LVPKS A+RLG+H LEYFVCVNGH+HGSC LVP Sbjct: 200 RVWSMTTARLVPKSVARRLGTHDGGLEYFVCVNGHLHGSCWLVP 243 >ref|XP_002276328.1| PREDICTED: EID1-like F-box protein 3-like [Vitis vinifera] Length = 300 Score = 315 bits (807), Expect = 1e-83 Identities = 145/224 (64%), Positives = 176/224 (78%) Frame = -1 Query: 1016 SDSSGLQNERILMLVCKSINWDPHLLCLISCVSRKLSAVAKRVLWKELCASRAPRMVPTL 837 S SG+ NERIL+L+ +SI WD H+LC S V+RKL AVA R+LW+ELC RAPRMV L Sbjct: 18 SGESGILNERILVLIFESIKWDIHVLCAASAVNRKLRAVATRLLWRELCVYRAPRMVTAL 77 Query: 836 VNGEPNLRVGDGWHALAKLLFFCCGCVPSRHFKIDQTLLGHFSKTSRFSKTSGQSFLMKR 657 G PN R+G GWHALAKL+FFCCGC +RHF++ + GHF K SRFSKTSG+SFL K+ Sbjct: 78 ATGAPNGRLGGGWHALAKLMFFCCGCESTRHFRVSRPSPGHFVKESRFSKTSGRSFLTKK 137 Query: 656 CQSDLLYISDPCEHTVEGSFEDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGA 477 C DLLY+SDPCEH + +DLG++RGVFRGFM+SKTR LI R+ + EE + CPYCGA Sbjct: 138 CSGDLLYVSDPCEHPMGEREDDLGIYRGVFRGFMRSKTRACLIRRQVKLEERVCCPYCGA 197 Query: 476 RVWSMTTAKLVPKSAAKRLGSHHEKLEYFVCVNGHVHGSCLLVP 345 RVWSMT A+LVPKSAA+RLG+H LEYFVC+NGH+HG+C LVP Sbjct: 198 RVWSMTAARLVPKSAARRLGTHDGGLEYFVCLNGHLHGTCWLVP 241 >ref|XP_002533076.1| conserved hypothetical protein [Ricinus communis] gi|223527140|gb|EEF29315.1| conserved hypothetical protein [Ricinus communis] Length = 279 Score = 310 bits (793), Expect = 5e-82 Identities = 140/224 (62%), Positives = 177/224 (79%) Frame = -1 Query: 1016 SDSSGLQNERILMLVCKSINWDPHLLCLISCVSRKLSAVAKRVLWKELCASRAPRMVPTL 837 S SG+ NERIL+LV +SI WD H LC + V+RKL A+AKR LW+ELC RAPRM+ +L Sbjct: 18 SGESGILNERILVLVFESIKWDLHALCATASVNRKLRAIAKRFLWRELCVYRAPRMLASL 77 Query: 836 VNGEPNLRVGDGWHALAKLLFFCCGCVPSRHFKIDQTLLGHFSKTSRFSKTSGQSFLMKR 657 NG PN GD WHA+AKL+F+CCGC +++FK+ Q GHF +TSRFSKTSGQSFL K+ Sbjct: 78 TNGAPNAPFGDSWHAIAKLMFYCCGCESTQNFKVSQPSPGHFIETSRFSKTSGQSFLNKK 137 Query: 656 CQSDLLYISDPCEHTVEGSFEDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGA 477 C+ DLLY+SDPCEH+ + +DLG++RGVF+GFMKS+TR LI R+ E E+ RCPYCG Sbjct: 138 CRGDLLYVSDPCEHSASNNEDDLGIYRGVFKGFMKSRTRACLIRRQVELEKRTRCPYCGF 197 Query: 476 RVWSMTTAKLVPKSAAKRLGSHHEKLEYFVCVNGHVHGSCLLVP 345 RVWSMT+A+LVPK+AA+RLGS + LEYFVC+NGH++G C LVP Sbjct: 198 RVWSMTSARLVPKTAARRLGSREDGLEYFVCLNGHLYGCCWLVP 241 >gb|AAK56924.1|AF368237_1 circadian clock coupling factor ZGT [Nicotiana tabacum] Length = 291 Score = 309 bits (792), Expect = 7e-82 Identities = 142/224 (63%), Positives = 178/224 (79%) Frame = -1 Query: 1016 SDSSGLQNERILMLVCKSINWDPHLLCLISCVSRKLSAVAKRVLWKELCASRAPRMVPTL 837 S+ SG+ +ERIL+ V SINWD LC +SCV+RKL AVAKR+LW+E+C RAP+M+ L Sbjct: 20 SEGSGIYDERILIPVFASINWDIRTLCQMSCVNRKLRAVAKRILWREMCVYRAPQMITAL 79 Query: 836 VNGEPNLRVGDGWHALAKLLFFCCGCVPSRHFKIDQTLLGHFSKTSRFSKTSGQSFLMKR 657 +G P+ R+G GW A+AKL+FFC GC SRHF++ + GHF KTSRFSKTSG+SFL+K+ Sbjct: 80 TDGSPSGRIGGGWQAMAKLMFFCNGCRSSRHFQVGEPAPGHFVKTSRFSKTSGRSFLVKK 139 Query: 656 CQSDLLYISDPCEHTVEGSFEDLGVFRGVFRGFMKSKTRDLLIGRKAEFEELIRCPYCGA 477 C++DLLY+SDPCEH +DLG+FRGVF GFM+S+TR LI R+ E EE I+CP+CGA Sbjct: 140 CRNDLLYVSDPCEHPTGDKDDDLGIFRGVFWGFMRSRTRACLIRRQVELEEKIKCPFCGA 199 Query: 476 RVWSMTTAKLVPKSAAKRLGSHHEKLEYFVCVNGHVHGSCLLVP 345 RVWSMT A+LVPKSAA+RLGS LEYFVCVNGH+HG+C LVP Sbjct: 200 RVWSMTAARLVPKSAARRLGSMESGLEYFVCVNGHLHGACWLVP 243