BLASTX nr result
ID: Coptis24_contig00019549
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00019549 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c... 85 5e-15 ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11... 85 7e-15 emb|CBI28007.3| unnamed protein product [Vitis vinifera] 85 7e-15 ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 83 2e-14 ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-13 >ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis] gi|223546684|gb|EEF48182.1| hypothetical protein RCOM_1049910 [Ricinus communis] Length = 109 Score = 85.1 bits (209), Expect = 5e-15 Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 2/100 (2%) Frame = -1 Query: 385 SSRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGG--VCMICME 212 SS ST ID FD+D AL P E D VA++PTV+S VC ICME Sbjct: 5 SSNSNSTFSTCLIDVSFDMDEALALPPNFGHQISESDSLVADMPTVTSTDDHDVCSICME 64 Query: 211 EFNRGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92 F +++ C HVYH C+S+WLS NSCPLCR +I Sbjct: 65 GFQSPGVCGKQVPCGHVYHAPCISSWLSNCNSCPLCRFNI 104 >ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera] Length = 102 Score = 84.7 bits (208), Expect = 7e-15 Identities = 41/97 (42%), Positives = 60/97 (61%) Frame = -1 Query: 382 SRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFN 203 S ++ M ID CFDLDLA+T +S ++K V+ +PTV+++ C +C E F Sbjct: 5 SPESSLMVNRHIDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQ 62 Query: 202 RGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92 G+ ++L C H YH C+++WLS NSCPLCRCS+ Sbjct: 63 SGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 98 >emb|CBI28007.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 84.7 bits (208), Expect = 7e-15 Identities = 41/97 (42%), Positives = 60/97 (61%) Frame = -1 Query: 382 SRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFN 203 S ++ M ID CFDLDLA+T +S ++K V+ +PTV+++ C +C E F Sbjct: 71 SPESSLMVNRHIDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQ 128 Query: 202 RGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92 G+ ++L C H YH C+++WLS NSCPLCRCS+ Sbjct: 129 SGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 164 >ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus] Length = 116 Score = 83.2 bits (204), Expect = 2e-14 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 3/101 (2%) Frame = -1 Query: 385 SSRDTPAMSTFSIDSCFDLDLALTTP---VQSSLVTKEPDFRVAELPTVSSIGGVCMICM 215 +S + A I+S FDLD LT V P VAELPTV++ VC +CM Sbjct: 3 TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62 Query: 214 EEFNRGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92 E+F + +++ C HVYH++C+S+WLS +SCPLCRC I Sbjct: 63 EDFLPDEG-GKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI 102 >ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|222832065|gb|EEE70542.1| predicted protein [Populus trichocarpa] Length = 99 Score = 80.5 bits (197), Expect = 1e-13 Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Frame = -1 Query: 361 STFSIDSCFDLDLALTTPVQ-SSLVTKEPDFRVAELPTVSSIG-GVCMICMEEFNRGKDV 188 S+ ID+ FDLD ALT P S +T VA++PT + G VC +CME F G Sbjct: 7 SSCLIDTSFDLDEALTLPQNLSQQITYSNSTIVADMPTALTTGDAVCAVCMEGFQSGIG- 65 Query: 187 AERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92 +++ C HVYHE C+S LS +SCPLCRC I Sbjct: 66 GKKVPCGHVYHEACISALLSHRHSCPLCRCDI 97