BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019549
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c...    85   5e-15
ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    85   7e-15
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               85   7e-15
ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    83   2e-14
ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13

>ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
           gi|223546684|gb|EEF48182.1| hypothetical protein
           RCOM_1049910 [Ricinus communis]
          Length = 109

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/100 (45%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
 Frame = -1

Query: 385 SSRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGG--VCMICME 212
           SS      ST  ID  FD+D AL  P        E D  VA++PTV+S     VC ICME
Sbjct: 5   SSNSNSTFSTCLIDVSFDMDEALALPPNFGHQISESDSLVADMPTVTSTDDHDVCSICME 64

Query: 211 EFNRGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92
            F       +++ C HVYH  C+S+WLS  NSCPLCR +I
Sbjct: 65  GFQSPGVCGKQVPCGHVYHAPCISSWLSNCNSCPLCRFNI 104


>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/97 (42%), Positives = 60/97 (61%)
 Frame = -1

Query: 382 SRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFN 203
           S ++  M    ID CFDLDLA+T    +S ++K     V+ +PTV+++   C +C E F 
Sbjct: 5   SPESSLMVNRHIDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQ 62

Query: 202 RGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92
            G+   ++L C H YH  C+++WLS  NSCPLCRCS+
Sbjct: 63  SGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 98


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 41/97 (42%), Positives = 60/97 (61%)
 Frame = -1

Query: 382 SRDTPAMSTFSIDSCFDLDLALTTPVQSSLVTKEPDFRVAELPTVSSIGGVCMICMEEFN 203
           S ++  M    ID CFDLDLA+T    +S ++K     V+ +PTV+++   C +C E F 
Sbjct: 71  SPESSLMVNRHIDLCFDLDLAITAVDDTSEISKSTSM-VSTMPTVTAVDA-CTVCREGFQ 128

Query: 202 RGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92
            G+   ++L C H YH  C+++WLS  NSCPLCRCS+
Sbjct: 129 SGEG-GKQLPCGHFYHAGCIASWLSLRNSCPLCRCSV 164


>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
 Frame = -1

Query: 385 SSRDTPAMSTFSIDSCFDLDLALTTP---VQSSLVTKEPDFRVAELPTVSSIGGVCMICM 215
           +S +  A     I+S FDLD  LT          V   P   VAELPTV++   VC +CM
Sbjct: 3   TSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVCM 62

Query: 214 EEFNRGKDVAERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92
           E+F   +   +++ C HVYH++C+S+WLS  +SCPLCRC I
Sbjct: 63  EDFLPDEG-GKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHI 102


>ref|XP_002332344.1| predicted protein [Populus trichocarpa] gi|222832065|gb|EEE70542.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/92 (46%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = -1

Query: 361 STFSIDSCFDLDLALTTPVQ-SSLVTKEPDFRVAELPTVSSIG-GVCMICMEEFNRGKDV 188
           S+  ID+ FDLD ALT P   S  +T      VA++PT  + G  VC +CME F  G   
Sbjct: 7   SSCLIDTSFDLDEALTLPQNLSQQITYSNSTIVADMPTALTTGDAVCAVCMEGFQSGIG- 65

Query: 187 AERLACNHVYHETCVSTWLSQNNSCPLCRCSI 92
            +++ C HVYHE C+S  LS  +SCPLCRC I
Sbjct: 66  GKKVPCGHVYHEACISALLSHRHSCPLCRCDI 97