BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019541
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522340.1| zinc finger protein, putative [Ricinus commu...    88   1e-15
ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244...    85   9e-15
ref|XP_002310753.1| f-box family protein [Populus trichocarpa] g...    85   1e-14
emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]    82   8e-14
emb|CBI18563.3| unnamed protein product [Vitis vinifera]               80   3e-13

>ref|XP_002522340.1| zinc finger protein, putative [Ricinus communis]
           gi|223538418|gb|EEF40024.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 335

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
 Frame = +3

Query: 135 GDAQNTGIQELYQSLRSSVN-YYPDQSSATTTNLTSMPTSSSSIMEPTVIAGGEFNCWNP 311
           G+AQN+GIQELYQ LRSS N YY D SS   +N+ S  TSSS+I+E + +AGGE   WNP
Sbjct: 261 GEAQNSGIQELYQRLRSSTNTYYTDNSSVVLSNVGSSSTSSSNILESSPVAGGELGYWNP 320

Query: 312 QFSWSSVQAATNGTFP 359
            FSWS +   TNG +P
Sbjct: 321 TFSWSDL-PTTNGAYP 335


>ref|XP_003635142.1| PREDICTED: uncharacterized protein LOC100244391 [Vitis vinifera]
          Length = 332

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 44/75 (58%), Positives = 49/75 (65%)
 Frame = +3

Query: 135 GDAQNTGIQELYQSLRSSVNYYPDQSSATTTNLTSMPTSSSSIMEPTVIAGGEFNCWNPQ 314
           G+ QNTGIQELYQ LRSS NYY D S    +N  S   SSSSI+E   IAGGE   WNP 
Sbjct: 262 GEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNAVS---SSSSILESAPIAGGELGYWNPT 318

Query: 315 FSWSSVQAATNGTFP 359
           FSWS +   TNG +P
Sbjct: 319 FSWSDL-PTTNGAYP 332


>ref|XP_002310753.1| f-box family protein [Populus trichocarpa]
           gi|118482074|gb|ABK92968.1| unknown [Populus
           trichocarpa] gi|222853656|gb|EEE91203.1| f-box family
           protein [Populus trichocarpa]
          Length = 323

 Score = 84.7 bits (208), Expect(2) = 1e-14
 Identities = 43/77 (55%), Positives = 52/77 (67%), Gaps = 2/77 (2%)
 Frame = +3

Query: 135 GDAQNTGIQELYQSLRSSVNYYPDQSSATTTN--LTSMPTSSSSIMEPTVIAGGEFNCWN 308
           G+AQN+GIQELYQ LRSS NYY D  SA   +   TS  TS+S+I+E   +AGGE   WN
Sbjct: 248 GEAQNSGIQELYQRLRSSTNYYTDNPSAIVLSNVATSSSTSTSTILESAPVAGGELGYWN 307

Query: 309 PQFSWSSVQAATNGTFP 359
           P FSWS +   TNG +P
Sbjct: 308 PAFSWSDL-PTTNGAYP 323



 Score = 20.4 bits (41), Expect(2) = 1e-14
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 1   TIGLDSLGQVPT 36
           T+GLD + QVP+
Sbjct: 216 TLGLDPISQVPS 227


>emb|CAN72540.1| hypothetical protein VITISV_028751 [Vitis vinifera]
          Length = 309

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 43/72 (59%), Positives = 47/72 (65%)
 Frame = +3

Query: 144 QNTGIQELYQSLRSSVNYYPDQSSATTTNLTSMPTSSSSIMEPTVIAGGEFNCWNPQFSW 323
           QNTGIQELYQ LRSS NYY D S    +N  S   SSSSI+E   IAGGE   WNP FSW
Sbjct: 242 QNTGIQELYQRLRSSTNYYTDHSPVVLSNAVS---SSSSILESAPIAGGELGYWNPTFSW 298

Query: 324 SSVQAATNGTFP 359
           S +   TNG +P
Sbjct: 299 SDL-PTTNGAYP 309


>emb|CBI18563.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
 Frame = +3

Query: 135 GDAQNTGIQELYQSLRSSVNYYPDQSSATTTN-----------------LTSMPTSSSSI 263
           G+ QNTGIQELYQ LRSS NYY D S    +N                 L++  +SSSSI
Sbjct: 335 GEVQNTGIQELYQRLRSSTNYYTDHSPVVLSNAVSSSSSILESAPIAGVLSNAVSSSSSI 394

Query: 264 MEPTVIAGGEFNCWNPQFSWSSVQAATNGTFP 359
           +E   IAGGE   WNP FSWS +   TNG +P
Sbjct: 395 LESAPIAGGELGYWNPTFSWSDL-PTTNGAYP 425