BLASTX nr result

ID: Coptis24_contig00019534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019534
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002521721.1| conserved hypothetical protein [Ricinus comm...   105   5e-21
ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262...   100   2e-19
emb|CBI37643.3| unnamed protein product [Vitis vinifera]              100   2e-19
emb|CAN62018.1| hypothetical protein VITISV_008855 [Vitis vinifera]   100   2e-19

>ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|222856664|gb|EEE94211.1|
            predicted protein [Populus trichocarpa]
          Length = 890

 Score =  107 bits (267), Expect = 1e-21
 Identities = 53/75 (70%), Positives = 63/75 (84%)
 Frame = -1

Query: 264  EDENGDTVDQIKKKYGFSSSGDSSVAKLTENKLHENITKLKGINIRATEMQGTAQSFSAM 85
            +DE    VDQIKKKYGFS SG+SS AK+ +NKLHENI KL+GIN+RATEMQ TA SFSAM
Sbjct: 816  KDEKTGAVDQIKKKYGFSLSGESSAAKIAQNKLHENIRKLQGINLRATEMQETASSFSAM 875

Query: 84   AKDVLRTAERDKPNS 40
            AK+VLR +E+DK +S
Sbjct: 876  AKEVLRISEKDKQSS 890


>ref|XP_002521721.1| conserved hypothetical protein [Ricinus communis]
            gi|223539112|gb|EEF40708.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 995

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/84 (63%), Positives = 66/84 (78%)
 Frame = -1

Query: 291  EKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKLTENKLHENITKLKGINIRATEMQ 112
            EK  +K    DE    VDQIKKKYGFSSS +S+ AK+ E+KLHEN+ KL+GIN RATEMQ
Sbjct: 911  EKKISKEEQLDEKAGGVDQIKKKYGFSSSTESTAAKMAESKLHENVKKLQGINQRATEMQ 970

Query: 111  GTAQSFSAMAKDVLRTAERDKPNS 40
             TA+SFSAMA+++L+TAE+DK  S
Sbjct: 971  DTARSFSAMARELLKTAEKDKDTS 994


>ref|XP_002280019.1| PREDICTED: uncharacterized protein LOC100262676 [Vitis vinifera]
          Length = 1053

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/84 (63%), Positives = 64/84 (76%)
 Frame = -1

Query: 291  EKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKLTENKLHENITKLKGINIRATEMQ 112
            EK S K   +DE    VDQIKKKYGF  SG+SSV K+ E+KL+EN+ KL+GINI+ TEMQ
Sbjct: 971  EKSSTKEEPQDEKAGAVDQIKKKYGFPISGESSVIKMAESKLNENLKKLQGINIKTTEMQ 1030

Query: 111  GTAQSFSAMAKDVLRTAERDKPNS 40
             TA+SFS MAK VLR AE+DK +S
Sbjct: 1031 DTAKSFSFMAKQVLR-AEQDKQSS 1053


>emb|CBI37643.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/84 (63%), Positives = 64/84 (76%)
 Frame = -1

Query: 291  EKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKLTENKLHENITKLKGINIRATEMQ 112
            EK S K   +DE    VDQIKKKYGF  SG+SSV K+ E+KL+EN+ KL+GINI+ TEMQ
Sbjct: 972  EKSSTKEEPQDEKAGAVDQIKKKYGFPISGESSVIKMAESKLNENLKKLQGINIKTTEMQ 1031

Query: 111  GTAQSFSAMAKDVLRTAERDKPNS 40
             TA+SFS MAK VLR AE+DK +S
Sbjct: 1032 DTAKSFSFMAKQVLR-AEQDKQSS 1054


>emb|CAN62018.1| hypothetical protein VITISV_008855 [Vitis vinifera]
          Length = 137

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/84 (63%), Positives = 64/84 (76%)
 Frame = -1

Query: 291 EKGSAKPAHEDENGDTVDQIKKKYGFSSSGDSSVAKLTENKLHENITKLKGINIRATEMQ 112
           EK S K   +DE    VDQIKKKYGF  SG+SSV K+ E+KL+EN+ KL+GINI+ TEMQ
Sbjct: 55  EKSSTKEEPQDEKAGAVDQIKKKYGFPISGESSVIKMAESKLNENLKKLQGINIKTTEMQ 114

Query: 111 GTAQSFSAMAKDVLRTAERDKPNS 40
            TA+SFS MAK VLR AE+DK +S
Sbjct: 115 DTAKSFSFMAKQVLR-AEQDKQSS 137


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