BLASTX nr result

ID: Coptis24_contig00019533 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019533
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containi...   151   2e-34
emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]   147   3e-33
ref|XP_002523895.1| pentatricopeptide repeat-containing protein,...   142   1e-31
ref|XP_002533225.1| pentatricopeptide repeat-containing protein,...   130   3e-28
ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containi...   128   2e-27

>ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Vitis vinifera]
          Length = 778

 Score =  151 bits (381), Expect = 2e-34
 Identities = 81/162 (50%), Positives = 109/162 (67%)
 Frame = +3

Query: 9    TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
            TYNTLI  LC EGR++ A  LL+EM+EK+L PD++TYNA+    T++GRI EA+ F++KM
Sbjct: 630  TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 189  AEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGK 368
             E G  PD            + +Q +KN  ++  E+  ++SDSSS+AYS+ I ELC  GK
Sbjct: 690  LEKGNLPD------------QVLQLDKNETVVTSET-SEESDSSSVAYSEWIKELCTEGK 736

Query: 369  FREASATLEEMVQKGIKVNSSTYISLMHGLIKRRKSISKMLR 494
            +++A     E  QKGI V+ STYI+LM GLIKRRKSISK  R
Sbjct: 737  YKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYN LI GLC EGRIE A +L  EM+  KL PD  +YN L  G  E  +I EA   + +M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 189 AEMGKTPDMCCIAALEK-DISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
           +E G  P+      + K    EG   + +  +   E      D   + Y+  I+  C AG
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPD--CVTYNTLINGYCKAG 432

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRK 473
              EA  T++EM +K +K++S T  +++  L + +K
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468



 Score = 69.7 bits (169), Expect = 9e-10
 Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 1/151 (0%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYN +I GLC  G+ E A+  L E+ E  L PD  TYN +  G+   G +E+A  F  KM
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584

Query: 189 AEMGKTPDM-CCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
            E    PD+  C   L     EG+  EK ++ L      +     ++ Y+  I  LC  G
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGV-LEKALK-LFNTWVSKGKAIDTVTYNTLITSLCKEG 642

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGL 458
           +  +A   L EM +K +  +  TY +++  L
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITAL 673



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 34/185 (18%)
 Frame = +3

Query: 3   ATTYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVT 182
           A T+N ++   C EG+++ A   +T+M+E    PD  TYN L  G+ +AG + EA   + 
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 183 KMAEMGKTPDMCCIAAL------EKDISE-------------------------GIQTEK 269
           +M       D   +  +      EK + E                         G   + 
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 270 NVEMLAR---ESPQQDSDSSSIAYSKRIDELCNAGKFREASATLEEMVQKGIKVNSSTYI 440
           NV+   +   E  +++   S++ Y+  I  LC  GK  +A + L E+++ G+  + +TY 
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 441 SLMHG 455
           +++HG
Sbjct: 563 TILHG 567



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYNT++  LC +GR+  A +LL +M+ + L P+  TYN L  G+ + G ++EA   +  M
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 189 AEMGKTPDMCCIAALEKDISEGIQTEKNVE---MLARESPQQDSDSSSIAYSKRIDELCN 359
            +    PD+     L      G+  E  +E    L  E          ++Y+  I+    
Sbjct: 305 TQNNLLPDVWTYNML----INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360

Query: 360 AGKFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRK 473
             K  EA   LEEM +KG+K N+ T+  ++    K  K
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           +Y TLI+G   +G ++ AL+L  EM+EK++ P   TYN +  G  + G+ E+A   + ++
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549

Query: 189 AEMGKTPDMCCIAAL------EKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDE 350
            E G  PD      +      E D+ +  Q       +   S + D  + +I     +  
Sbjct: 550 LESGLLPDETTYNTILHGYCREGDVEKAFQFHNK---MVENSFKPDVFTCNIL----LRG 602

Query: 351 LCNAGKFREASATLEEMVQKGIKVNSSTYISLMHGLIK 464
           LC  G   +A       V KG  +++ TY +L+  L K
Sbjct: 603 LCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640


>emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  147 bits (372), Expect = 3e-33
 Identities = 81/162 (50%), Positives = 106/162 (65%)
 Frame = +3

Query: 9    TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
            TYNTLI  LC EGR++ A  LL+EM+EK+L PD++TYNA+    T++GRI EA+ F++KM
Sbjct: 630  TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689

Query: 189  AEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGK 368
             E G  P       L+ D +E + T +  E         +SDSSS+AYS+ I ELC  GK
Sbjct: 690  LEKGXLPXQ----VLQLDXNETVVTSETSE---------ESDSSSVAYSEWIKELCTEGK 736

Query: 369  FREASATLEEMVQKGIKVNSSTYISLMHGLIKRRKSISKMLR 494
            +++A     E  QKGI V+ STYI+LM GLIKRRKSISK  R
Sbjct: 737  YKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKEAR 778



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYN LI GLC EGRIE A +L  EM+  KL PD  +YN L  G  E  +I EA   + +M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 189 AEMGKTPDMCCIAALEK-DISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
           +E G  P+      + K    EG   + +  +   E      D   + Y+  I+  C AG
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPD--CVTYNTLINGYCKAG 432

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRK 473
              EA  T++EM +K +K++S T  +++  L + +K
Sbjct: 433 NMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKK 468



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 46/150 (30%), Positives = 71/150 (47%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYN +I GLC  G+ E A+  L E+ E  L PD  TYN +  G+   G +E+A  F  KM
Sbjct: 525 TYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKM 584

Query: 189 AEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGK 368
            E    PD+     L + +      EK ++ L      +     ++ Y+  I  LC  G+
Sbjct: 585 VENSFKPDVFTCNILLRGLCMEGMLEKALK-LFNTWVSKGKAIDTVTYNTLITSLCKEGR 643

Query: 369 FREASATLEEMVQKGIKVNSSTYISLMHGL 458
             +A   L EM +K +  +  TY +++  L
Sbjct: 644 LDDAFNLLSEMEEKELGPDHYTYNAIITAL 673



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 34/185 (18%)
 Frame = +3

Query: 3   ATTYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVT 182
           A T+N ++   C EG+++ A   +T+M+E    PD  TYN L  G+ +AG + EA   + 
Sbjct: 383 AVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMD 442

Query: 183 KMAEMGKTPDMCCIAAL------EKDISE-------------------------GIQTEK 269
           +M       D   +  +      EK + E                         G   + 
Sbjct: 443 EMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDG 502

Query: 270 NVEMLAR---ESPQQDSDSSSIAYSKRIDELCNAGKFREASATLEEMVQKGIKVNSSTYI 440
           NV+   +   E  +++   S++ Y+  I  LC  GK  +A + L E+++ G+  + +TY 
Sbjct: 503 NVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYN 562

Query: 441 SLMHG 455
           +++HG
Sbjct: 563 TILHG 567



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 3/158 (1%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYNT++  LC +GR+  A +LL +M+ + L P+  TYN L  G+ + G ++EA   +  M
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 189 AEMGKTPDMCCIAALEKDISEGIQTEKNVE---MLARESPQQDSDSSSIAYSKRIDELCN 359
            +    PD+     L      G+  E  +E    L  E          ++Y+  I+    
Sbjct: 305 TQNNLLPDVWTYNML----INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLE 360

Query: 360 AGKFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRK 473
             K  EA   LEEM +KG+K N+ T+  ++    K  K
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGK 398



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           +Y TLI+G   +G ++ AL+L  EM+EK++ P   TYN +  G  + G+ E+A   + ++
Sbjct: 490 SYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNEL 549

Query: 189 AEMGKTPDMCCIAAL------EKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDE 350
            E G  PD      +      E D+ +  Q       +   S + D  + +I     +  
Sbjct: 550 LESGLLPDETTYNTILHGYCREGDVEKAFQFHNK---MVENSFKPDVFTCNIL----LRG 602

Query: 351 LCNAGKFREASATLEEMVQKGIKVNSSTYISLMHGLIK 464
           LC  G   +A       V KG  +++ TY +L+  L K
Sbjct: 603 LCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640


>ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536825|gb|EEF38464.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 784

 Score =  142 bits (357), Expect = 1e-31
 Identities = 74/161 (45%), Positives = 106/161 (65%)
 Frame = +3

Query: 3    ATTYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVT 182
            A TYNT+I GLC E R E A +LL EM+EKKL PD +TYNA+     +AGR++EA+ F++
Sbjct: 632  AVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMS 691

Query: 183  KMAEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNA 362
            ++ E GK  D   I+  ++ I    +T             Q+SD +S+ +S++I+ELC  
Sbjct: 692  RIVEQGKLQDQ-TISLNKRKIESSSET------------SQESDPNSVTFSEQINELCTQ 738

Query: 363  GKFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRKSISK 485
            GK+++A   ++E  QKGI ++ STYISLM GLIKRRKSIS+
Sbjct: 739  GKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSISR 779



 Score = 79.7 bits (195), Expect = 9e-13
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYN LI GLC +G+I+ A  L  EM+  KL PD  TYN L  G  +     +    + KM
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 189 AEMGKTPDMCCIAALEK-DISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
              G  P+      + K  + EG       E+  R+  +       + ++  I+  C AG
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL--RKMEESGFSPDCVTFNTLINGYCKAG 436

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRK 473
           +  EA   ++EM +KG+K+NS T  +++H L   RK
Sbjct: 437 RLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 472



 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 44/150 (29%), Positives = 74/150 (49%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYNT+I GLC  G+ + +++ L E+ E  L PD  TYN +  G+   G++E+A  F  KM
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKM 588

Query: 189 AEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGK 368
            +    PD+     L + +      +K ++ L      +     ++ Y+  I  LC   +
Sbjct: 589 VKKSFKPDLFTCNILLRGLCTEGMLDKALK-LFNTWISKGKAIDAVTYNTIISGLCKEDR 647

Query: 369 FREASATLEEMVQKGIKVNSSTYISLMHGL 458
           F EA   L EM +K +  +  TY +++  L
Sbjct: 648 FEEAFDLLAEMEEKKLGPDCYTYNAILSAL 677



 Score = 59.3 bits (142), Expect = 1e-06
 Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 3/155 (1%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           +Y TLIMG   +G+   A++L  EM+EK++ P   TYN +  G   +G+ +++   + ++
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNEL 553

Query: 189 AEMGKTPDMCCIAALEKDISEGIQTEKNVEM---LARESPQQDSDSSSIAYSKRIDELCN 359
            E G  PD      +        Q EK  +    + ++S + D  + +I     +  LC 
Sbjct: 554 LESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNIL----LRGLCT 609

Query: 360 AGKFREASATLEEMVQKGIKVNSSTYISLMHGLIK 464
            G   +A       + KG  +++ TY +++ GL K
Sbjct: 610 EGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCK 644


>ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526957|gb|EEF29157.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 605

 Score =  130 bits (328), Expect = 3e-28
 Identities = 71/155 (45%), Positives = 102/155 (65%)
 Frame = +3

Query: 3   ATTYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVT 182
           A T+NT+I GLC EGR E A +LL EM+EKKL PD +T+NA+     +AGR++EA+ F++
Sbjct: 464 AVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMS 523

Query: 183 KMAEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNA 362
            + E GK  D     +L K      +TE + E        Q+SD +S+A+S++I+ELC  
Sbjct: 524 GIVEQGKLQDQ--TISLNKR-----KTESSSE------TSQESDPNSVAFSEQINELCTQ 570

Query: 363 GKFREASATLEEMVQKGIKVNSSTYISLMHGLIKR 467
           GK+++A   ++E  QKGI ++ STYISLM GLIKR
Sbjct: 571 GKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 40/150 (26%), Positives = 74/150 (49%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TY T+I GLC  G+ + +++   E+ E  L PD  TYN +  G+   G++++A  F  KM
Sbjct: 361 TYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKM 420

Query: 189 AEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGK 368
            +    PD+     L + +      +K ++ L +    +     ++ ++  I  LC  G+
Sbjct: 421 VKKSFKPDLFTCNILVRGLCTEGMLDKALK-LFKTWISKGKAIDAVTFNTIISGLCEEGR 479

Query: 369 FREASATLEEMVQKGIKVNSSTYISLMHGL 458
           F EA   L EM +K +  +  T+ +++  L
Sbjct: 480 FEEAFDLLAEMEEKKLGPDCYTHNAILSAL 509


>ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein At2g16880-like
            [Brachypodium distachyon]
          Length = 787

 Score =  128 bits (321), Expect = 2e-27
 Identities = 65/158 (41%), Positives = 101/158 (63%)
 Frame = +3

Query: 9    TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
            TYNTLI  +C +G ++ AL    +M+ + L+PD FTYN +    +EAGR EEAQ  + K+
Sbjct: 627  TYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686

Query: 189  AEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGK 368
            AE G          L+    +  ++ K+ +    E+ +   DS+S AY+K ++ LC +G+
Sbjct: 687  AESGTLSQSFSSPLLKPSSVDEAESGKDAKT-EEETVENPQDSASEAYTKLVNGLCTSGQ 745

Query: 369  FREASATLEEMVQKGIKVNSSTYISLMHGLIKRRKSIS 482
            F+EA A L+EM+QKG+ V+SSTYI+LM GL+KR+K ++
Sbjct: 746  FKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLT 783



 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 44/151 (29%), Positives = 72/151 (47%)
 Frame = +3

Query: 6   TTYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTK 185
           +TYNTLI GL   GR++ A++ L E+ EK L PD  TYN +   + + G +E A  F  K
Sbjct: 521 STYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNK 580

Query: 186 MAEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
           M E    PD+     L   +    + +K ++ L     ++      I Y+  I  +C  G
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALK-LFESWVEKGKKVDVITYNTLIQTMCKDG 639

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGL 458
               A     +M  +G++ ++ TY  ++  L
Sbjct: 640 DVDTALHFFADMEARGLQPDAFTYNVVLSAL 670



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 41/150 (27%), Positives = 71/150 (47%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           T+N +I GLC +G +E AL  L +M +  L PD  TYN L     +AG I +A   + +M
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 189 AEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAGK 368
              G   D   +  +  ++ +  + E+  + L +  PQ+      ++Y   +        
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEE-AQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYN 500

Query: 369 FREASATLEEMVQKGIKVNSSTYISLMHGL 458
              A    +EM++K +  + STY +L+ GL
Sbjct: 501 SEPALRLWDEMIEKKLTPSISTYNTLIKGL 530



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 1/153 (0%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           TYNTL+      G I+ A +++  M     +PD +TYN L  G  +AG+++EA     +M
Sbjct: 276 TYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335

Query: 189 AEMGK-TPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
             +G   PD+     L  D     +   +   L  E  ++   ++ + ++  I  LC  G
Sbjct: 336 ERLGTLLPDVVTYNTL-ADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDG 394

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGLIK 464
           +   A   L +M   G+  +  TY +L+H   K
Sbjct: 395 ELEGALGCLNKMADDGLAPDVITYNTLIHAHCK 427



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEK-KLKPDYFTYNALFCGFTEAGRIEEAQLFVTK 185
           TYN L  GLC  G+++ A  L  EM+    L PD  TYN L     +     +A   + +
Sbjct: 311 TYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEE 370

Query: 186 MAEMGKTPDMCCIAALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
           M E G    +     + K + +  + E  +  L + +         I Y+  I   C AG
Sbjct: 371 MREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMA-DDGLAPDVITYNTLIHAHCKAG 429

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGLIKRRK 473
              +A   ++EMV++G+K+++ T  ++++ L K ++
Sbjct: 430 NIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKR 465



 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 45/153 (29%), Positives = 68/153 (44%), Gaps = 1/153 (0%)
 Frame = +3

Query: 9   TYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVTKM 188
           +Y T++     E   E AL L  EM EKKL P   TYN L  G +  GR++EA   + ++
Sbjct: 487 SYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL 546

Query: 189 AEMGKTPDMCCI-AALEKDISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRIDELCNAG 365
            E G  PD       +     EG    +N      +  +       +  +  ++ LC  G
Sbjct: 547 MEKGLVPDDTTYNIIIHAYCKEG--DLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNG 604

Query: 366 KFREASATLEEMVQKGIKVNSSTYISLMHGLIK 464
           K  +A    E  V+KG KV+  TY +L+  + K
Sbjct: 605 KLDKALKLFESWVEKGKKVDVITYNTLIQTMCK 637



 Score = 56.6 bits (135), Expect = 8e-06
 Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3   ATTYNTLIMGLCIEGRIEAALELLTEMQEKKLKPDYFTYNALFCGFTEAGRIEEAQLFVT 182
           A TYNTL+   C +G +  A  LL  M++  + P   TYN L   +   G I++A   V 
Sbjct: 239 AVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVE 298

Query: 183 KMAEMGKTPDMCCIAALEK------DISEGIQTEKNVEMLARESPQQDSDSSSIAYSKRI 344
            M   G  PD+     L         + E  + +  +E L    P        + Y+   
Sbjct: 299 AMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLP------DVVTYNTLA 352

Query: 345 DELCNAGKFREASATLEEMVQKGIKVNSSTYISLMHGLIK 464
           D         +A   LEEM +KG+K    T+  ++ GL K
Sbjct: 353 DACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCK 392


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