BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019523
         (1949 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27...   534   e-149
emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]   532   e-148
ref|XP_002298618.1| f-box family protein [Populus trichocarpa] g...   478   e-132
ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus ...   473   e-131
ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27...   453   e-125

>ref|XP_002273717.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Vitis vinifera]
          Length = 437

 Score =  534 bits (1375), Expect = e-149
 Identities = 260/377 (68%), Positives = 305/377 (80%)
 Frame = -3

Query: 1449 NGFSLKRDGNVGSSDSVEPQDADYSHSLPSLSDEIVHRILARVPVSEHWKLCFLSRSYLD 1270
            NGFS   +  VGSS +V+ QDADYS   PSLS E+   ILARVP SE+WK CF+++ YL 
Sbjct: 65   NGFS-SGECRVGSSSAVDTQDADYSDG-PSLSYEVEGLILARVPRSEYWKFCFVNKRYLT 122

Query: 1269 LLKSGELYKIRKEIGIEEPSVFMLACGEPHWWTFDRHFNSFRNLPALPSDPCFVAGDKES 1090
            LLKSGEL+KIR+EIG++E SVFMLA GE  WW FDR F S R LP LPSDPCF + DKES
Sbjct: 123  LLKSGELFKIRREIGVKESSVFMLASGETSWWAFDRQFESRRRLPILPSDPCFTSADKES 182

Query: 1089 LCVGTHLLVSGKEIEGVVIWRYELAVNRWCKGPSMIRPRCLFASANCGDFACVAGGIAMG 910
            +C GTHL+VSG+E EGVVIWRYELA+N+W KGPSM+ PRC+FASANCG FACVAGGI+M 
Sbjct: 183  VCAGTHLIVSGREFEGVVIWRYELAMNKWFKGPSMLNPRCMFASANCGAFACVAGGISMV 242

Query: 909  TIMEVLDSAEMYNPKNKSWNPLPKMRKGRKLCSGFYMDNKFYVIGGQDEDGNNLTCGECF 730
            +  EVL+SAE+YNP NKSW+ LP+M K RK CSG YMDNKFYVIGGQDE G  LTCGE +
Sbjct: 243  STKEVLNSAEIYNPDNKSWDTLPRMNKRRKHCSGCYMDNKFYVIGGQDEKGEGLTCGEAY 302

Query: 729  DVSNKYTWELIPDILKDAPTSTSRSPPLLAVVKNELYSLEASSNQLKVYLKKSNSWKELG 550
            D   K  W+LIPD+LKDAP STS SPPL+AVV N+LYSLEASSN+LKVYLKK+NSW+ LG
Sbjct: 303  DEDRK-AWDLIPDMLKDAPVSTSESPPLVAVVNNDLYSLEASSNELKVYLKKTNSWRRLG 361

Query: 549  KVPVRADHSRGWGIAFKSFGDELLVIGGAWNSYAGHGMMICTCSPDPHNDKELRWRFLGP 370
             VPVRAD +RGWG+AFKS G+ELLVIG +  S+AGHGM I TC PDP + +EL W+ L  
Sbjct: 362  TVPVRADFNRGWGVAFKSLGNELLVIGASSVSFAGHGMTIYTCCPDP-DAEELLWKPLDS 420

Query: 369  GRNRISHFILNCSVMLA 319
            GRNR+SHFILNCS+M+A
Sbjct: 421  GRNRLSHFILNCSIMIA 437


>emb|CAN60757.1| hypothetical protein VITISV_041987 [Vitis vinifera]
          Length = 514

 Score =  532 bits (1370), Expect = e-148
 Identities = 259/377 (68%), Positives = 304/377 (80%)
 Frame = -3

Query: 1449 NGFSLKRDGNVGSSDSVEPQDADYSHSLPSLSDEIVHRILARVPVSEHWKLCFLSRSYLD 1270
            NGFS   +  VGSS +V+ QDADYS   PSLS E+   ILARVP SE+WK CF+++ YL 
Sbjct: 142  NGFS-SGECRVGSSSAVDTQDADYSDG-PSLSYEVEGLILARVPRSEYWKFCFVNKRYLT 199

Query: 1269 LLKSGELYKIRKEIGIEEPSVFMLACGEPHWWTFDRHFNSFRNLPALPSDPCFVAGDKES 1090
            LLKSGEL+KIR+EIG++E SVFMLA GE  WW FDR F   R LP LPSDPCF + DKES
Sbjct: 200  LLKSGELFKIRREIGVKESSVFMLASGETSWWAFDRQFEYRRRLPILPSDPCFTSADKES 259

Query: 1089 LCVGTHLLVSGKEIEGVVIWRYELAVNRWCKGPSMIRPRCLFASANCGDFACVAGGIAMG 910
            +C GTHL+VSG+E EGVVIWRYELA+N+W KGPSM+ PRC+FASANCG FACVAGGI+M 
Sbjct: 260  VCAGTHLIVSGREFEGVVIWRYELAMNKWFKGPSMLNPRCMFASANCGXFACVAGGISMV 319

Query: 909  TIMEVLDSAEMYNPKNKSWNPLPKMRKGRKLCSGFYMDNKFYVIGGQDEDGNNLTCGECF 730
            +  EVL+SAE+YNP NKSW+ LP+M K RK CSG YMDNKFYVIGGQDE G  LTCGE +
Sbjct: 320  STKEVLNSAEIYNPDNKSWDTLPRMNKRRKHCSGCYMDNKFYVIGGQDEKGEGLTCGEAY 379

Query: 729  DVSNKYTWELIPDILKDAPTSTSRSPPLLAVVKNELYSLEASSNQLKVYLKKSNSWKELG 550
            D   K  W+LIPD+LKDAP STS SPPL+AVV N+LYSLEASSN+LKVYLKK+NSW+ LG
Sbjct: 380  DEDRK-AWDLIPDMLKDAPVSTSESPPLVAVVNNDLYSLEASSNELKVYLKKTNSWRRLG 438

Query: 549  KVPVRADHSRGWGIAFKSFGDELLVIGGAWNSYAGHGMMICTCSPDPHNDKELRWRFLGP 370
             VPVRAD +RGWG+AFKS G+ELLVIG +  S+AGHGM I TC PDP + +EL W+ L  
Sbjct: 439  TVPVRADFNRGWGVAFKSLGNELLVIGASSVSFAGHGMTIYTCXPDP-DAEELLWKPLDS 497

Query: 369  GRNRISHFILNCSVMLA 319
            GRNR+SHFILNCS+M+A
Sbjct: 498  GRNRLSHFILNCSIMIA 514


>ref|XP_002298618.1| f-box family protein [Populus trichocarpa]
            gi|222845876|gb|EEE83423.1| f-box family protein [Populus
            trichocarpa]
          Length = 390

 Score =  478 bits (1229), Expect = e-132
 Identities = 235/372 (63%), Positives = 293/372 (78%), Gaps = 2/372 (0%)
 Frame = -3

Query: 1428 DGNVGSSDSVEPQDADYSHSLPSLSDEIVHRILARVPVSEHWKLCFLSRSYLDLLKSGEL 1249
            +G VG S +V+PQD DYS++ P LSDE+ + ILARVP SE+WK   +++  L L+KSGEL
Sbjct: 23   NGRVGDSSNVKPQDTDYSYA-PQLSDELENLILARVPRSEYWKFPNVNKRILSLVKSGEL 81

Query: 1248 YKIRKEIGIEEPSVFMLACGEPHWWTFDRHFNSFRNLPALPSDPCFVAGDKESLCVGTHL 1069
            +KIR+EIG+ E SVF+ A G+  WW FDR F S R LP LP+D CF  GDKESLC GTHL
Sbjct: 82   FKIRREIGVRESSVFIFATGDKSWWAFDRQFCSRRKLPDLPADCCFSFGDKESLCAGTHL 141

Query: 1068 LVSGKEIEGVVIWRYELAVNRWCKGPSMIRPRCLFASANCGDFACVAGGIAMGTIMEVLD 889
            ++SG+EIEGVV+WRYEL  N W KGPSMI PRCLFASA+CG FA VAGG+  GT ++VL+
Sbjct: 142  IISGREIEGVVVWRYELETNSWNKGPSMINPRCLFASASCGAFAFVAGGVT-GTGVDVLN 200

Query: 888  SAEMYNPKNKSWNPLPKMRKGRKLCSGFYMDNKFYVIGGQDEDGNNLTCGECFDVSNKYT 709
            SAE YNP  KSW  LP+MR+ RKLCSG +MDNKFYVIGG++E+GN LTC E +D  +K  
Sbjct: 201  SAEKYNPDTKSWEDLPRMRQRRKLCSGCFMDNKFYVIGGRNEEGNVLTCAEAYD-EDKKA 259

Query: 708  WELIPDILKDAPTSTSRSPPLLAVVKNELYSLEASSNQLKVYLKKSNSWKELGKVPVRAD 529
            W+LIPD+L+D P +T +SPPL+AVV NELY+LE SSNQLKVYLK+S +WK+LG VPVRAD
Sbjct: 260  WDLIPDMLEDTPIATFQSPPLIAVVNNELYALEPSSNQLKVYLKRSRTWKKLGAVPVRAD 319

Query: 528  HSRGWGIAFKSFGDELLVIGGAWN--SYAGHGMMICTCSPDPHNDKELRWRFLGPGRNRI 355
             ++GWG+AFKS G+ELLVIG + +  SY+G GM I TC PD   + EL+WR L  G+NR+
Sbjct: 320  SNKGWGVAFKSLGNELLVIGASTSTVSYSGDGMAIYTCRPDSEAE-ELQWRPLECGKNRL 378

Query: 354  SHFILNCSVMLA 319
            S+FILNCSVM+A
Sbjct: 379  SNFILNCSVMVA 390


>ref|XP_002509526.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223549425|gb|EEF50913.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 483

 Score =  473 bits (1218), Expect = e-131
 Identities = 230/372 (61%), Positives = 285/372 (76%), Gaps = 2/372 (0%)
 Frame = -3

Query: 1428 DGNVGSSDSVEPQDADYSHSLPSLSDEIVHRILARVPVSEHWKLCFLSRSYLDLLKSGEL 1249
            DG VG S SV+PQDADY    P LSDE+ ++ILARVP SE+WK   +++    L+KSGEL
Sbjct: 116  DGRVGDSSSVQPQDADY-FEYPQLSDEVENQILARVPRSEYWKFPLVNKRIYALVKSGEL 174

Query: 1248 YKIRKEIGIEEPSVFMLACGEPHWWTFDRHFNSFRNLPALPSDPCFVAGDKESLCVGTHL 1069
            +KIR+E+G+ E SVFM   G+  WW FDR F+  R LP LP+DPCF +GDKE++C GTHL
Sbjct: 175  FKIRRELGVRESSVFMFTTGDSGWWAFDRQFSCRRKLPDLPADPCFSSGDKETVCAGTHL 234

Query: 1068 LVSGKEIEGVVIWRYELAVNRWCKGPSMIRPRCLFASANCGDFACVAGGIAMGTIMEVLD 889
            ++SG+EI GVV+WRYEL  NRW KGPSMI+PRCLFASA+CG FA VAGG+       VL+
Sbjct: 235  IISGREINGVVVWRYELETNRWRKGPSMIKPRCLFASASCGLFAFVAGGVTEAG--AVLN 292

Query: 888  SAEMYNPKNKSWNPLPKMRKGRKLCSGFYMDNKFYVIGGQDEDGNNLTCGECFDVSNKYT 709
            SAE YNP  +SW  LP+M++ R+L SG YMDNKFYVIGG++E+G  LTCGE +D  +K T
Sbjct: 293  SAEKYNPDTRSWETLPRMQRKRRLSSGCYMDNKFYVIGGRNEEGRCLTCGEAYD-EDKKT 351

Query: 708  WELIPDILKDAPTSTSRSPPLLAVVKNELYSLEASSNQLKVYLKKSNSWKELGKVPVRAD 529
            WELIPD+L+D P +T +SPPL+AVV NELYSLE SSN+LKVY K+S +W++LG VPVRAD
Sbjct: 352  WELIPDMLEDTPVATYQSPPLVAVVNNELYSLETSSNELKVYSKRSKTWRKLGPVPVRAD 411

Query: 528  HSRGWGIAFKSFGDELLVIGGAWN--SYAGHGMMICTCSPDPHNDKELRWRFLGPGRNRI 355
             SRGWG+AFKS G+ELLVIG + +  SY+G GM I TC PD   D  L W  L  GRNR+
Sbjct: 412  SSRGWGVAFKSLGNELLVIGASTSIVSYSGDGMAIYTCCPDDKTDHALHWTPLECGRNRL 471

Query: 354  SHFILNCSVMLA 319
            S+FILNCSVM+A
Sbjct: 472  SNFILNCSVMVA 483


>ref|XP_003547649.1| PREDICTED: F-box/kelch-repeat protein At3g27150-like [Glycine max]
          Length = 404

 Score =  453 bits (1165), Expect = e-125
 Identities = 227/370 (61%), Positives = 274/370 (74%), Gaps = 2/370 (0%)
 Frame = -3

Query: 1428 DGNVGSSDSVEP--QDADYSHSLPSLSDEIVHRILARVPVSEHWKLCFLSRSYLDLLKSG 1255
            DGN  S++  EP  QDADYS+ L SLSDE+   ILAR P S+HWKLCFL++ +L L +SG
Sbjct: 36   DGNGSSTNGDEPLPQDADYSNVL-SLSDELETSILARFPRSQHWKLCFLNKRFLALARSG 94

Query: 1254 ELYKIRKEIGIEEPSVFMLACGEPHWWTFDRHFNSFRNLPALPSDPCFVAGDKESLCVGT 1075
            E+YKIR+E+  +EPSVFMLA GE +WW  +  FNS + LP + SD  F  GDKES C G+
Sbjct: 95   EIYKIRRELRFKEPSVFMLASGESNWWGMEWPFNSSKKLPPIQSDYNFEYGDKESFCAGS 154

Query: 1074 HLLVSGKEIEGVVIWRYELAVNRWCKGPSMIRPRCLFASANCGDFACVAGGIAMGTIMEV 895
            HLLVSGKEI+G VIWR++   N W KGPSMI PRCLFASA CG  A VAGG    T  +V
Sbjct: 155  HLLVSGKEIDGAVIWRFDSIKNEWLKGPSMINPRCLFASATCGAIAFVAGGFDAITYTQV 214

Query: 894  LDSAEMYNPKNKSWNPLPKMRKGRKLCSGFYMDNKFYVIGGQDEDGNNLTCGECFDVSNK 715
            LDSAE YN +++ W PLP+M K RK CSG +MDNKFYV+GGQDE G +LTCGE FD    
Sbjct: 215  LDSAEKYNSESQCWEPLPRMNKKRKFCSGCFMDNKFYVLGGQDEHGKDLTCGEFFD-GKT 273

Query: 714  YTWELIPDILKDAPTSTSRSPPLLAVVKNELYSLEASSNQLKVYLKKSNSWKELGKVPVR 535
             +W LIPDI KD P   S+SPPLLAVV NELYSL+ASSN+LKVY+K +NSWK LG VPVR
Sbjct: 274  NSWNLIPDIWKDIPLFDSQSPPLLAVVNNELYSLDASSNELKVYVKGTNSWKTLGVVPVR 333

Query: 534  ADHSRGWGIAFKSFGDELLVIGGAWNSYAGHGMMICTCSPDPHNDKELRWRFLGPGRNRI 355
            AD  RGWG+AFKS GDELLVIG    S+  H + + TC PDP +D++LRWR +G G  ++
Sbjct: 334  ADAQRGWGVAFKSLGDELLVIGAPSVSHTVHALSMYTCCPDP-DDEKLRWRQIGCGSIQL 392

Query: 354  SHFILNCSVM 325
            +HFI NC+VM
Sbjct: 393  NHFIRNCAVM 402