BLASTX nr result

ID: Coptis24_contig00019522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00019522
         (1659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30694.3| unnamed protein product [Vitis vinifera]              233   9e-59
ref|XP_003524206.1| PREDICTED: uncharacterized protein LOC100808...   217   8e-54
ref|XP_003532757.1| PREDICTED: uncharacterized protein LOC100787...   210   1e-51
ref|XP_003629774.1| Myb family transcription factor APL [Medicag...   194   6e-47
emb|CBI21992.3| unnamed protein product [Vitis vinifera]              186   2e-44

>emb|CBI30694.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  233 bits (595), Expect = 9e-59
 Identities = 167/439 (38%), Positives = 224/439 (51%), Gaps = 19/439 (4%)
 Frame = +1

Query: 307  FDLNEDASSQDDESTTE-EIDPTFEAADTTMTSGNNDNAGGIER---SSTIRQYVRSKMP 474
            FDLNE+++S +D++  E E+    +  +   +S NN+N    E+    +++RQYVRSKMP
Sbjct: 25   FDLNEESNSPEDDAAAEAEVSMEDDEGEREGSSANNNNVSAGEKRRGKNSVRQYVRSKMP 84

Query: 475  RLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDCG 654
            RLRWTPDLHLSFVHAVERLGGQ RATPKLVL+LMNV+GLSIAHVKSHLQMYRSK+LD+ G
Sbjct: 85   RLRWTPDLHLSFVHAVERLGGQARATPKLVLELMNVKGLSIAHVKSHLQMYRSKRLDESG 144

Query: 655  QVLSHSAIPMQG-------CPSMFYHGSSPHGHFS-ERRDPFPGNNIYESNRPRRTLQYP 810
            QVL  +   M G        P + +  +    HFS E+       N  E +R    L+  
Sbjct: 145  QVLCKTYRRMGGRDRDRDCSPGILFRPTGSCRHFSMEKSGMEQAWNPGECSRSYNLLRCT 204

Query: 811  IYLEPYDTRGGFSRQQEWPLTQ---GSMIKPISLHGKDL--GLNEPIRPSRFLEQKRWPP 975
            +  + YD R   SR+Q++  +Q      +   +L  K      N P RPSRFLE+K+WPP
Sbjct: 205  LSQQQYDFRANSSRRQQYASSQYYNALRLSTSALQSKQYFGQGNGPTRPSRFLEEKKWPP 264

Query: 976  RDLIDNHHAKNQRFSTNVIWTGGSSQNLPHINWATP--VSNDVIYNTKKDSWWNTSTNMK 1149
            R+LI N   +  R       T  +SQ+L H    TP  V   + Y +KK S W+ +   +
Sbjct: 265  RELIGNPWREKTR-------TNAASQSLVHQICTTPRCVGATLTY-SKKPSEWSPANEER 316

Query: 1150 SRQLQSNSSDPILISDNVEPENETPFRLELRKMTTHQPKDTLEELRKIKGNLSLENPFFK 1329
              Q QS+   P  IS    P+ E PFRLE                       S +    K
Sbjct: 317  LGQFQSHLHYPKTISSISTPQIEPPFRLE-----------------------SNQEKRLK 353

Query: 1330 EKECVPNLQLSLRHDQGNESEDKATGGTNNIXXXXXXXXXXXXXXXXQDAQPNEQIQDIS 1509
            E+E +P+LQL L     NE +       +                  Q  QP E+ ++ +
Sbjct: 354  EEEWLPDLQLRLSQRSANEEDTH-----HKSKYEMNTMLSLSPYSSRQQEQPTEKQKEET 408

Query: 1510 QHKRWTLQAGCCKATLRLS 1566
            Q   W  Q    KA L LS
Sbjct: 409  QTNAWPSQTTTGKADLSLS 427


>ref|XP_003524206.1| PREDICTED: uncharacterized protein LOC100808625 [Glycine max]
          Length = 401

 Score =  217 bits (552), Expect = 8e-54
 Identities = 156/420 (37%), Positives = 208/420 (49%), Gaps = 27/420 (6%)
 Frame = +1

Query: 205  DMADRVEISDKEESIGXXXXXXXXXXXXXXKLSCFDLNEDASSQDDESTTEE-IDPTFEA 381
            D  +R E +D + S+G              K S FDLNE+ASS+D+    ++  +   E 
Sbjct: 3    DEYERSEHADDDSSMGSSQ-----------KCSSFDLNEEASSKDNNDNDDKGFEEAREE 51

Query: 382  ADTTMTSGNNDNAGGIERSSTIRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKL 561
              +T  S +    G  ER   +RQYVRSKMPRLRWTP+LHLSFVHAVERLGGQERATPKL
Sbjct: 52   GTSTNKSSSMTKEGSNERRGGVRQYVRSKMPRLRWTPELHLSFVHAVERLGGQERATPKL 111

Query: 562  VLQLMNVRGLSIAHVKSHLQMYRSKKLDDCGQVLSH---SAIPMQGCPSMFYHGSSPHGH 732
            VLQLMNVRGLSIAHVKSHLQMYRSKKLD+ GQVL     S   +     + +   +P  H
Sbjct: 112  VLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVLGQTYKSTHELGRISHVAHQSMNPRQH 171

Query: 733  FSERRDPFPGNNIYESNRPRRTLQYPIYLEPYDTRGGFSRQQEWPL-------------- 870
            F          + Y  +     L +P  L    T+    R+Q+W                
Sbjct: 172  FKMGNGGIILASDYNDHSYFHGLMHPCSLSHSHTKAIDLRRQQWYFNNHQPFRRPSYFSN 231

Query: 871  ---------TQGSMIKPISLHGKDLGLNEPIRPSRFLEQKRWPPRDLIDNHHAKNQRFST 1023
                     TQG  +    ++  D     P+RPS+FLE+K+WPP D+++NHH K +R   
Sbjct: 232  EVVSSTALQTQGRSLSSNQINLMDATSIAPMRPSQFLEEKKWPPLDIMNNHHWK-KRLPA 290

Query: 1024 NVIWTGGSSQNLPHINWATPVSNDVIYNTKKDSWWNTSTNMKSRQLQSNSSDPILISDNV 1203
            N I +   SQ + H    T  S        + S  N   N + ++  SNS +    S++ 
Sbjct: 291  N-ITSNAVSQPVVHQFGTTAAS------LLRPSELNFGNNTRIKEHLSNSDEHRNYSNSF 343

Query: 1204 EPENETPFRLELRKMTTHQPKDTLEELRKIKGNLSLENPFFKEKECVPNLQLSLRHDQGN 1383
            + E E PFR+          K   E+L+             KE +  P+L+LSL    GN
Sbjct: 344  KLEFEPPFRI----------KSNQEKLQ-------------KENQWAPDLRLSLSQRDGN 380


>ref|XP_003532757.1| PREDICTED: uncharacterized protein LOC100787138 [Glycine max]
          Length = 384

 Score =  210 bits (534), Expect = 1e-51
 Identities = 149/390 (38%), Positives = 194/390 (49%), Gaps = 27/390 (6%)
 Frame = +1

Query: 295  KLSCFDLNEDASSQDDESTTEEIDPTFEAAD---TTMTSGNNDNAGGIERSSTIRQYVRS 465
            K S FDLNE+ASS+D+    E  D   EA D   +T  S +    G  ER   +RQYVRS
Sbjct: 23   KCSSFDLNEEASSEDNNDNDEGYDE--EAKDEGTSTNKSSSITKEGSNERRGGVRQYVRS 80

Query: 466  KMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLD 645
            KMPRLRWTP+LHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLD
Sbjct: 81   KMPRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLD 140

Query: 646  DCGQVLSHSAIPMQGCPSMFYHGSSPHGHFSERRDPFPGNNIYESNRPRRTLQYPIYLEP 825
            + GQ                +   +P  HF          + Y        L +P  L P
Sbjct: 141  EAGQA---------------HQSMNPRQHFKMGNGGIILASDYNDRSYFHGLMHPSSLSP 185

Query: 826  YDTRGGFSRQQEWPL-----------------------TQGSMIKPISLHGKDLGLNEPI 936
              ++   SR Q+W                         TQG  +    ++  D     P+
Sbjct: 186  SQSKAIDSRHQQWYFNSHQPYRRPSYFSNEVVSSTTLQTQGRSMSSNQINLMDATSIAPM 245

Query: 937  RPSRFLEQKRWPPRDLIDNHHAKNQRFSTNVIWTGGSSQNLPHINWATPVSNDVIYNTKK 1116
            +PS+FLE+K+WPP D+++NHH K +R   N+    GS   +      +P        + +
Sbjct: 246  KPSQFLEEKKWPPLDIMNNHHWK-KRLPANISSNSGSQPVVHQFGTTSP--------SLR 296

Query: 1117 DSWWNTSTNMK-SRQLQSNSSDPILISDNVEPENETPFRLELRKMTTHQPKDTLEELRKI 1293
             S  N   N + S +  SNS +    S++++ E E  FR+          K   E+L+  
Sbjct: 297  PSELNFGNNTRISWEHLSNSDEHRNYSNSLKLELEPLFRI----------KSNQEKLQ-- 344

Query: 1294 KGNLSLENPFFKEKECVPNLQLSLRHDQGN 1383
                       KEK+  P+L+LSL    GN
Sbjct: 345  -----------KEKQWAPDLRLSLSQRDGN 363


>ref|XP_003629774.1| Myb family transcription factor APL [Medicago truncatula]
            gi|355523796|gb|AET04250.1| Myb family transcription
            factor APL [Medicago truncatula]
          Length = 426

 Score =  194 bits (493), Expect = 6e-47
 Identities = 155/427 (36%), Positives = 210/427 (49%), Gaps = 60/427 (14%)
 Frame = +1

Query: 307  FDLNEDASSQDDESTTEEIDPTFEAADTTMTSGNNDN-------------------AGGI 429
            FDLNE+AS  D +   EE D   EA D  + +  +D+                   +G  
Sbjct: 38   FDLNEEASRSDQDVNNEEND---EACDHELVNNGDDDDEKLAKDDDEGSSSSTKRSSGSN 94

Query: 430  ERSST-IRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHV 606
            ER    +RQYVRSKMPRLRWTPDLH SF+HAVERLGGQERATPKLVLQLMNVRGLSIAHV
Sbjct: 95   ERRRNGVRQYVRSKMPRLRWTPDLHHSFMHAVERLGGQERATPKLVLQLMNVRGLSIAHV 154

Query: 607  KSHLQMYRSKKLDDCGQVLSHSAIPMQGCPSMFYH----GSSPHGHFSERRDPFPGNNIY 774
            KSHLQMYRSKKLD+ GQVLS +        S+ +H       PH HF        G  + 
Sbjct: 155  KSHLQMYRSKKLDEAGQVLSPTHRSTHELGSISHHVAHQSMIPHQHFKMAN----GGIVL 210

Query: 775  ESNRPRRTLQYPIYLEPYDTRGGF---------SRQQEWPLTQGS---------MIKP-- 894
            E+N  + +  +   L P                SR QEW L   S         ++ P  
Sbjct: 211  ETNYNQHSYNFHSLLHPSSLSHSHSHSHSKPINSRHQEWYLNHQSWRPSYMSNELVMPST 270

Query: 895  -ISLHGK-DLGLNE--------------PIRPSRFLEQKRWPPRDLIDNHHAKNQRFSTN 1026
             ++  G+  + LN+              P+RPS+FLE+KRWPP D+++NH          
Sbjct: 271  TLNTQGRSSITLNQQLQVKDNTVTTTLAPMRPSQFLEEKRWPPLDIMNNH---------- 320

Query: 1027 VIWTGGSSQNLPHINWATPVSNDVIYNTKKDSWWNTSTNMKSRQLQSNSSDPILISDNVE 1206
              W     +NL H +++   S+       + S+ N   N +SR+  SN ++     ++ +
Sbjct: 321  PYW----KKNL-HDHFS---SDRTSLRPAEVSFGN---NTRSRENISNINNDHNYFNSSK 369

Query: 1207 PENETPFRLELRKMTTHQPKDTLEELRKIKGNLSLENPFFKEKECVPNLQLSLRHDQGNE 1386
             E + PFR++L + T                         K+K+ VP+LQLSL    GN 
Sbjct: 370  IEFDPPFRIKLNQET-----------------------LLKDKQWVPDLQLSLSQTNGN- 405

Query: 1387 SEDKATG 1407
            ++ K+ G
Sbjct: 406  NDGKSDG 412


>emb|CBI21992.3| unnamed protein product [Vitis vinifera]
          Length = 277

 Score =  186 bits (471), Expect = 2e-44
 Identities = 108/191 (56%), Positives = 126/191 (65%), Gaps = 8/191 (4%)
 Frame = +1

Query: 208 MADRVEISDKEESIGXXXXXXXXXXXXXXKLSCFDLNEDASSQDDESTT----EEIDPTF 375
           MA+R+EISD   S G                  FDLN+ A  ++D STT     E+    
Sbjct: 1   MAERIEISDDNRSDGSEIQTKTSSLLCFPGHLSFDLNQKAMDEEDSSTTGVPENEVKEDE 60

Query: 376 EAADTTMT-SGNNDNAGGIERSSTIRQYVRSKMPRLRWTPDLHLSFVHAVERLGGQERAT 552
            + D   + S NN    G ER+ T+RQY+RSKMPRLRWTPDLHL+FV+AVERLGGQERAT
Sbjct: 61  TSTDANYSNSSNNTTVEGKERT-TVRQYIRSKMPRLRWTPDLHLAFVNAVERLGGQERAT 119

Query: 553 PKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDCGQVLSHSAIPMQGCPSM--FYHGSSPH 726
           PKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDD GQVLSH++ PM     +   Y  +SP+
Sbjct: 120 PKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDSGQVLSHTSRPMYVRDHILEMYQRASPY 179

Query: 727 GHF-SERRDPF 756
           GHF  E R  F
Sbjct: 180 GHFRMENRSHF 190


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